RNA–Protein interactions for RNA: ENST00000489839.1

GABBR1-217, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 3

Gene GABBR1, Length 407 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-217ENST00000489839 TRPM1Q7Z4N2 1603 aa16■□□□□ 0.15
GABBR1-217ENST00000489839 ATAD2Q6PL18 1390 aa16■□□□□ 0.15
GABBR1-217ENST00000489839 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
GABBR1-217ENST00000489839 VPS72Q15906 364 aa15.99■□□□□ 0.15
GABBR1-217ENST00000489839 ACEP12821 1306 aa15.98■□□□□ 0.15
GABBR1-217ENST00000489839 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
GABBR1-217ENST00000489839 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
GABBR1-217ENST00000489839 CENPJQ9HC77 1338 aaPredicted RBP15.97■□□□□ 0.15
GABBR1-217ENST00000489839 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
GABBR1-217ENST00000489839 CABP2Q9NPB3 220 aa15.97■□□□□ 0.15
GABBR1-217ENST00000489839 COL14A1Q05707 1796 aaKnown RBP15.97■□□□□ 0.15
GABBR1-217ENST00000489839 PHRF1Q9P1Y6 1649 aaKnown RBP15.97■□□□□ 0.15
GABBR1-217ENST00000489839 PLEKHG3A1L390 1219 aa15.96■□□□□ 0.15
GABBR1-217ENST00000489839 BTG4Q9NY30 223 aa15.96■□□□□ 0.15
GABBR1-217ENST00000489839 CCDC61Q9Y6R9 512 aa15.96■□□□□ 0.15
GABBR1-217ENST00000489839 EP400Q96L91 3159 aa15.95■□□□□ 0.14
GABBR1-217ENST00000489839 SEPT12Q8IYM1 358 aa15.95■□□□□ 0.14
GABBR1-217ENST00000489839 ONECUT3O60422 494 aaPredicted RBP15.94■□□□□ 0.14
GABBR1-217ENST00000489839 CCDC9Q9Y3X0 531 aaKnown RBP15.94■□□□□ 0.14
GABBR1-217ENST00000489839 SRPK2P78362 688 aaKnown RBP15.93■□□□□ 0.14
GABBR1-217ENST00000489839 CHRNA2Q15822 529 aa15.93■□□□□ 0.14
GABBR1-217ENST00000489839 PPIP5K1Q6PFW1 1433 aa15.93■□□□□ 0.14
GABBR1-217ENST00000489839 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
GABBR1-217ENST00000489839 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
GABBR1-217ENST00000489839 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
GABBR1-217ENST00000489839 FAM98CQ17RN3 349 aaKnown RBP15.9■□□□□ 0.14
GABBR1-217ENST00000489839 CABP1Q9NZU7 370 aa15.9■□□□□ 0.14
GABBR1-217ENST00000489839 NRKQ7Z2Y5 1582 aa15.9■□□□□ 0.14
GABBR1-217ENST00000489839 ROCK2O75116 1388 aaKnown RBP15.89■□□□□ 0.13
GABBR1-217ENST00000489839 SPATA31A5Q5VU36 1347 aa15.89■□□□□ 0.13
GABBR1-217ENST00000489839 SPATA31A7Q8IWB4 1347 aa15.89■□□□□ 0.13
GABBR1-217ENST00000489839 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
GABBR1-217ENST00000489839 USP19O94966 1318 aa15.88■□□□□ 0.13
GABBR1-217ENST00000489839 THSD7AQ9UPZ6 1657 aa15.87■□□□□ 0.13
GABBR1-217ENST00000489839 FAM182BQ5T319 152 aa15.87■□□□□ 0.13
GABBR1-217ENST00000489839 KRT27Q7Z3Y8 459 aa15.87■□□□□ 0.13
GABBR1-217ENST00000489839 DEFB132Q7Z7B7 95 aa15.87■□□□□ 0.13
GABBR1-217ENST00000489839 CAMTA1Q9Y6Y1 1673 aa15.86■□□□□ 0.13
GABBR1-217ENST00000489839 LMO7Q8WWI1 1683 aa15.86■□□□□ 0.13
GABBR1-217ENST00000489839 USP6P35125 1406 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 BLMP54132 1417 aaPredicted RBP15.85■□□□□ 0.13
GABBR1-217ENST00000489839 SSH2Q76I76 1423 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 A0A0G2JS52 829 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 MYT1Q01538 1121 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 CCDC125Q86Z20 511 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 STRN4Q9NRL3 753 aa15.85■□□□□ 0.13
GABBR1-217ENST00000489839 PIK3C2AO00443 1686 aa15.84■□□□□ 0.13
GABBR1-217ENST00000489839 SPATA31A1Q5TZJ5 1347 aa15.84■□□□□ 0.13
GABBR1-217ENST00000489839 EVC2Q86UK5 1308 aa15.84■□□□□ 0.13
GABBR1-217ENST00000489839 AKAP12Q02952 1782 aa15.84■□□□□ 0.13
GABBR1-217ENST00000489839 GCP02774 474 aa15.83■□□□□ 0.12
GABBR1-217ENST00000489839 CPDO75976 1380 aa15.82■□□□□ 0.12
GABBR1-217ENST00000489839 SLIT3O75094 1523 aa15.81■□□□□ 0.12
GABBR1-217ENST00000489839 LARP1Q6PKG0 1096 aaKnown RBP15.81■□□□□ 0.12
GABBR1-217ENST00000489839 NLRP13Q86W25 1043 aa15.81■□□□□ 0.12
GABBR1-217ENST00000489839 COL18A1P39060 1754 aa15.8■□□□□ 0.12
GABBR1-217ENST00000489839 NLRP6P59044 892 aa15.8■□□□□ 0.12
GABBR1-217ENST00000489839 USP35Q9P2H5 1018 aa15.8■□□□□ 0.12
GABBR1-217ENST00000489839 BRD4O60885 1362 aaPredicted RBP15.79■□□□□ 0.12
GABBR1-217ENST00000489839 TRIM26Q12899 539 aaPredicted RBP15.79■□□□□ 0.12
GABBR1-217ENST00000489839 CARD11Q9BXL7 1154 aa15.79■□□□□ 0.12
GABBR1-217ENST00000489839 CPSF1Q10570 1443 aaKnown RBP15.78■□□□□ 0.12
GABBR1-217ENST00000489839 TONSLQ96HA7 1378 aa15.78■□□□□ 0.12
GABBR1-217ENST00000489839 RGPD5Q99666 1765 aa15.78■□□□□ 0.12
GABBR1-217ENST00000489839 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
GABBR1-217ENST00000489839 ZBTB7CA1YPR0 619 aa15.77■□□□□ 0.12
GABBR1-217ENST00000489839 EVA1CP58658 441 aa15.77■□□□□ 0.12
GABBR1-217ENST00000489839 ZRANB1Q9UGI0 708 aa15.77■□□□□ 0.12
GABBR1-217ENST00000489839 COL5A2P05997 1499 aaPredicted RBP15.77■□□□□ 0.11
GABBR1-217ENST00000489839 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.11
GABBR1-217ENST00000489839 MON2Q7Z3U7 1717 aa15.77■□□□□ 0.11
GABBR1-217ENST00000489839 TNS1Q9HBL0 1735 aaKnown RBP15.77■□□□□ 0.11
GABBR1-217ENST00000489839 SBNO2Q9Y2G9 1366 aa15.76■□□□□ 0.11
GABBR1-217ENST00000489839 RGPD1P0DJD0 1748 aa15.76■□□□□ 0.11
GABBR1-217ENST00000489839 AXIN2Q9Y2T1 843 aa15.75■□□□□ 0.11
GABBR1-217ENST00000489839 SF3B2Q13435 895 aaKnown RBP15.74■□□□□ 0.11
GABBR1-217ENST00000489839 BARGINQ6ZT62 677 aa15.74■□□□□ 0.11
GABBR1-217ENST00000489839 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
GABBR1-217ENST00000489839 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
GABBR1-217ENST00000489839 KTN1Q86UP2 1357 aaKnown RBP15.74■□□□□ 0.11
GABBR1-217ENST00000489839 SOX12O15370 315 aa15.73■□□□□ 0.11
GABBR1-217ENST00000489839 EN1Q05925 392 aaPredicted RBP15.73■□□□□ 0.11
GABBR1-217ENST00000489839 TCP11L2Q8N4U5 519 aa15.73■□□□□ 0.11
GABBR1-217ENST00000489839 SLC12A5Q9H2X9 1139 aa15.73■□□□□ 0.11
GABBR1-217ENST00000489839 NFAT5O94916 1531 aa15.72■□□□□ 0.11
GABBR1-217ENST00000489839 PARP4Q9UKK3 1724 aaKnown RBP15.71■□□□□ 0.11
GABBR1-217ENST00000489839 TRIM37O94972 964 aa15.71■□□□□ 0.11
GABBR1-217ENST00000489839 ARHGEF25Q86VW2 580 aa15.71■□□□□ 0.11
GABBR1-217ENST00000489839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.71■□□□□ 0.11
GABBR1-217ENST00000489839 TESK2Q96S53 571 aa15.71■□□□□ 0.11
GABBR1-217ENST00000489839 SRCAPQ6ZRS2 3230 aa15.71■□□□□ 0.11
GABBR1-217ENST00000489839 TTC21AQ8NDW8 1320 aa15.7■□□□□ 0.1
GABBR1-217ENST00000489839 CRB1P82279 1406 aa15.7■□□□□ 0.1
GABBR1-217ENST00000489839 BAG6P46379 1132 aa15.7■□□□□ 0.1
GABBR1-217ENST00000489839 NME9Q86XW9 330 aa15.7■□□□□ 0.1
GABBR1-217ENST00000489839 WNK3Q9BYP7 1800 aa15.69■□□□□ 0.1
GABBR1-217ENST00000489839 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
GABBR1-217ENST00000489839 TMC1Q8TDI8 760 aa15.69■□□□□ 0.1
GABBR1-217ENST00000489839 USP54Q70EL1 1684 aa15.69■□□□□ 0.1
GABBR1-217ENST00000489839 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms