RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 ACEP12821 1306 aa19.22■□□□□ 0.67
VPS26A-205ENST00000489656 NUTM2FA1L443 756 aa19.21■□□□□ 0.67
VPS26A-205ENST00000489656 SSH2Q76I76 1423 aa19.21■□□□□ 0.67
VPS26A-205ENST00000489656 NLRP13Q86W25 1043 aa19.21■□□□□ 0.67
VPS26A-205ENST00000489656 MST1RQ04912 1400 aa19.2■□□□□ 0.66
VPS26A-205ENST00000489656 MAP2P11137 1827 aaKnown RBP19.2■□□□□ 0.66
VPS26A-205ENST00000489656 MSH6P52701 1360 aa19.19■□□□□ 0.66
VPS26A-205ENST00000489656 LTBP4Q8N2S1 1624 aa19.19■□□□□ 0.66
VPS26A-205ENST00000489656 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
VPS26A-205ENST00000489656 PIK3C2AO00443 1686 aa19.18■□□□□ 0.66
VPS26A-205ENST00000489656 MARF1Q9Y4F3 1742 aaKnown RBP19.18■□□□□ 0.66
VPS26A-205ENST00000489656 FYB1O15117 783 aa19.18■□□□□ 0.66
VPS26A-205ENST00000489656 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
VPS26A-205ENST00000489656 TRPM3Q9HCF6 1732 aaPredicted RBP19.17■□□□□ 0.66
VPS26A-205ENST00000489656 PPP2R1AP30153 589 aa19.17■□□□□ 0.66
VPS26A-205ENST00000489656 CCDC184Q52MB2 194 aa19.17■□□□□ 0.66
VPS26A-205ENST00000489656 ATF3P18847 181 aa19.16■□□□□ 0.66
VPS26A-205ENST00000489656 CADPS2Q86UW7 1296 aa19.16■□□□□ 0.66
VPS26A-205ENST00000489656 MRS2Q9HD23 443 aa19.16■□□□□ 0.66
VPS26A-205ENST00000489656 PHF8Q9UPP1 1060 aa19.16■□□□□ 0.66
VPS26A-205ENST00000489656 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
VPS26A-205ENST00000489656 NGDNQ8NEJ9 315 aaKnown RBP19.15■□□□□ 0.66
VPS26A-205ENST00000489656 PMFBP1Q8TBY8 1022 aa19.15■□□□□ 0.66
VPS26A-205ENST00000489656 TTC21BQ7Z4L5 1316 aa19.15■□□□□ 0.66
VPS26A-205ENST00000489656 TTC21AQ8NDW8 1320 aa19.15■□□□□ 0.66
VPS26A-205ENST00000489656 OVOS2A0A0J9YW53 1432 aa19.12■□□□□ 0.65
VPS26A-205ENST00000489656 OVOS2Q6IE36 1432 aa19.12■□□□□ 0.65
VPS26A-205ENST00000489656 GGNBP2Q9H3C7 697 aa19.12■□□□□ 0.65
VPS26A-205ENST00000489656 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
VPS26A-205ENST00000489656 ESCO1Q5FWF5 840 aa19.11■□□□□ 0.65
VPS26A-205ENST00000489656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.11■□□□□ 0.65
VPS26A-205ENST00000489656 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
VPS26A-205ENST00000489656 USP31Q70CQ4 1352 aa19.1■□□□□ 0.65
VPS26A-205ENST00000489656 NME9Q86XW9 330 aa19.09■□□□□ 0.65
VPS26A-205ENST00000489656 PNISRQ8TF01 805 aaKnown RBP19.08■□□□□ 0.64
VPS26A-205ENST00000489656 ORAI2Q96SN7 254 aa19.08■□□□□ 0.64
VPS26A-205ENST00000489656 NHSL1Q5SYE7 1610 aa19.07■□□□□ 0.64
VPS26A-205ENST00000489656 AATKQ6ZMQ8 1374 aa19.07■□□□□ 0.64
VPS26A-205ENST00000489656 SMG6Q86US8 1419 aaKnown RBP19.07■□□□□ 0.64
VPS26A-205ENST00000489656 INSRP06213 1382 aa19.06■□□□□ 0.64
VPS26A-205ENST00000489656 COG3Q96JB2 828 aa19.06■□□□□ 0.64
VPS26A-205ENST00000489656 LTN1O94822 1766 aa19.04■□□□□ 0.64
VPS26A-205ENST00000489656 COL3A1P02461 1466 aaPredicted RBP19.03■□□□□ 0.64
VPS26A-205ENST00000489656 PXDNQ92626 1479 aa19.03■□□□□ 0.64
VPS26A-205ENST00000489656 PSME1Q06323 249 aa19.02■□□□□ 0.64
VPS26A-205ENST00000489656 ZRANB1Q9UGI0 708 aa19.02■□□□□ 0.64
VPS26A-205ENST00000489656 CRYBG1Q9Y4K1 1723 aa19.02■□□□□ 0.63
VPS26A-205ENST00000489656 CDK12Q9NYV4 1490 aaPredicted RBP19.02■□□□□ 0.63
VPS26A-205ENST00000489656 PHRF1Q9P1Y6 1649 aaKnown RBP19.01■□□□□ 0.63
VPS26A-205ENST00000489656 TNNT2P45379 298 aaPredicted RBP19.01■□□□□ 0.63
VPS26A-205ENST00000489656 FAM9BQ8IZU0 186 aa19.01■□□□□ 0.63
VPS26A-205ENST00000489656 PNPLA6Q8IY17 1366 aa19.01■□□□□ 0.63
VPS26A-205ENST00000489656 NPHP3Q7Z494 1330 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 PEAK1Q9H792 1746 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 FOXO3O43524 673 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 MTHFSP49914 203 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 YTHDC1Q96MU7 727 aaKnown RBP19■□□□□ 0.63
VPS26A-205ENST00000489656 SLAIN2Q9P270 581 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 SBNO1A3KN83 1393 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 SLIT3O75094 1523 aa19■□□□□ 0.63
VPS26A-205ENST00000489656 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
VPS26A-205ENST00000489656 BLMP54132 1417 aaPredicted RBP18.99■□□□□ 0.63
VPS26A-205ENST00000489656 ROBO1Q9Y6N7 1651 aa18.98■□□□□ 0.63
VPS26A-205ENST00000489656 IQSEC2Q5JU85 1478 aa18.98■□□□□ 0.63
VPS26A-205ENST00000489656 BRINP3Q76B58 766 aa18.98■□□□□ 0.63
VPS26A-205ENST00000489656 KRT28Q7Z3Y7 464 aa18.98■□□□□ 0.63
VPS26A-205ENST00000489656 NFAT5O94916 1531 aa18.97■□□□□ 0.63
VPS26A-205ENST00000489656 ABTB2Q8N961 1025 aa18.97■□□□□ 0.63
VPS26A-205ENST00000489656 POLKQ9UBT6 870 aa18.97■□□□□ 0.63
VPS26A-205ENST00000489656 MED1Q15648 1581 aaPredicted RBP18.97■□□□□ 0.63
VPS26A-205ENST00000489656 NLRP6P59044 892 aa18.96■□□□□ 0.63
VPS26A-205ENST00000489656 TNS3Q68CZ2 1445 aa18.95■□□□□ 0.62
VPS26A-205ENST00000489656 PAK3O75914 559 aaPredicted RBP18.95■□□□□ 0.62
VPS26A-205ENST00000489656 AHDC1Q5TGY3 1603 aaPredicted RBP18.95■□□□□ 0.62
VPS26A-205ENST00000489656 KIF24Q5T7B8 1368 aa18.94■□□□□ 0.62
VPS26A-205ENST00000489656 WDR43Q15061 677 aaKnown RBP eCLIP18.94■□□□□ 0.62
VPS26A-205ENST00000489656 RGPD1P0DJD0 1748 aa18.93■□□□□ 0.62
VPS26A-205ENST00000489656 ABCA3Q99758 1704 aa18.93■□□□□ 0.62
VPS26A-205ENST00000489656 USP19O94966 1318 aa18.93■□□□□ 0.62
VPS26A-205ENST00000489656 SOS2Q07890 1332 aaPredicted RBP18.92■□□□□ 0.62
VPS26A-205ENST00000489656 XPCQ01831 940 aaPredicted RBP18.91■□□□□ 0.62
VPS26A-205ENST00000489656 EMILIN1Q9Y6C2 1016 aa18.91■□□□□ 0.62
VPS26A-205ENST00000489656 FBLN1P23142 703 aa18.9■□□□□ 0.62
VPS26A-205ENST00000489656 ADAMTS8Q9UP79 889 aa18.9■□□□□ 0.62
VPS26A-205ENST00000489656 SPATA31A3Q5VYP0 1347 aa18.9■□□□□ 0.62
VPS26A-205ENST00000489656 ARHGEF10O15013 1369 aa18.9■□□□□ 0.62
VPS26A-205ENST00000489656 HNRNPUQ00839 825 aaKnown RBP eCLIP18.89■□□□□ 0.61
VPS26A-205ENST00000489656 RRS1Q15050 365 aaKnown RBP18.89■□□□□ 0.61
VPS26A-205ENST00000489656 RTL1A6NKG5 1358 aa18.89■□□□□ 0.61
VPS26A-205ENST00000489656 CENPBP07199 599 aaPredicted RBP18.88■□□□□ 0.61
VPS26A-205ENST00000489656 KCNH5Q8NCM2 988 aa18.88■□□□□ 0.61
VPS26A-205ENST00000489656 DDX17Q92841 729 aaKnown RBP18.88■□□□□ 0.61
VPS26A-205ENST00000489656 FLT4P35916 1363 aa18.88■□□□□ 0.61
VPS26A-205ENST00000489656 RGPD5Q99666 1765 aa18.88■□□□□ 0.61
VPS26A-205ENST00000489656 DIAPH1O60610 1272 aaKnown RBP18.87■□□□□ 0.61
VPS26A-205ENST00000489656 ABCC6O95255 1503 aa18.87■□□□□ 0.61
VPS26A-205ENST00000489656 MAP3K19Q56UN5 1328 aa18.87■□□□□ 0.61
VPS26A-205ENST00000489656 NUTM2GQ5VZR2 741 aa18.87■□□□□ 0.61
VPS26A-205ENST00000489656 ZBED9Q6R2W3 1325 aa18.87■□□□□ 0.61
VPS26A-205ENST00000489656 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms