RNA–Protein interactions for RNA: ENST00000489333.1

GABRE-210, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-210ENST00000489333 NBPF1Q3BBV0 1214 aa11.39□□□□□ -0.59
GABRE-210ENST00000489333 NUTM2AQ8IVF1 878 aaPredicted RBP11.39□□□□□ -0.59
GABRE-210ENST00000489333 IFT172Q9UG01 1749 aa11.38□□□□□ -0.59
GABRE-210ENST00000489333 DCCP43146 1447 aa11.38□□□□□ -0.59
GABRE-210ENST00000489333 MS4A1P11836 297 aa11.38□□□□□ -0.59
GABRE-210ENST00000489333 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
GABRE-210ENST00000489333 IRX6P78412 446 aaPredicted RBP11.38□□□□□ -0.59
GABRE-210ENST00000489333 PANK3Q9H999 370 aa11.38□□□□□ -0.59
GABRE-210ENST00000489333 RPGRIP1LQ68CZ1 1315 aa11.37□□□□□ -0.59
GABRE-210ENST00000489333 MST1RQ04912 1400 aa11.37□□□□□ -0.59
GABRE-210ENST00000489333 TCERG1O14776 1098 aaKnown RBP11.37□□□□□ -0.59
GABRE-210ENST00000489333 B4GALNT3Q6L9W6 998 aa11.37□□□□□ -0.59
GABRE-210ENST00000489333 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.37□□□□□ -0.59
GABRE-210ENST00000489333 PUS7Q96PZ0 661 aaKnown RBP11.37□□□□□ -0.59
GABRE-210ENST00000489333 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
GABRE-210ENST00000489333 ADGRL3Q9HAR2 1447 aa11.36□□□□□ -0.59
GABRE-210ENST00000489333 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
GABRE-210ENST00000489333 ZNF772Q68DY9 489 aaPredicted RBP11.36□□□□□ -0.59
GABRE-210ENST00000489333 PPLO60437 1756 aa11.36□□□□□ -0.59
GABRE-210ENST00000489333 ANP32AP39687 249 aaKnown RBP11.35□□□□□ -0.59
GABRE-210ENST00000489333 DDX17Q92841 729 aaKnown RBP11.35□□□□□ -0.59
GABRE-210ENST00000489333 SPDYE2BA6NHP3 402 aa11.33□□□□□ -0.6
GABRE-210ENST00000489333 SPDYE6P0CI01 402 aa11.33□□□□□ -0.6
GABRE-210ENST00000489333 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
GABRE-210ENST00000489333 MYOM1P52179 1685 aa11.32□□□□□ -0.6
GABRE-210ENST00000489333 AFF2P51816 1311 aa11.32□□□□□ -0.6
GABRE-210ENST00000489333 ROBO2Q9HCK4 1378 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 NINLQ9Y2I6 1382 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 VGFO15240 615 aaPredicted RBP11.31□□□□□ -0.6
GABRE-210ENST00000489333 RXRBP28702 533 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 AAMPQ13685 434 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 AMER1Q5JTC6 1135 aaPredicted RBP11.31□□□□□ -0.6
GABRE-210ENST00000489333 LRRC59Q96AG4 307 aaKnown RBP11.31□□□□□ -0.6
GABRE-210ENST00000489333 AKT1S1Q96B36 256 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 C8orf37Q96NL8 207 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 PTCH1Q13635 1447 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
GABRE-210ENST00000489333 PNPLA6Q8IY17 1366 aa11.3□□□□□ -0.6
GABRE-210ENST00000489333 PPP2R1AP30153 589 aa11.3□□□□□ -0.6
GABRE-210ENST00000489333 CC2D1BQ5T0F9 858 aaKnown RBP11.3□□□□□ -0.6
GABRE-210ENST00000489333 C1orf167Q5SNV9 1468 aa11.3□□□□□ -0.6
GABRE-210ENST00000489333 ADAMTS2O95450 1211 aa11.28□□□□□ -0.6
GABRE-210ENST00000489333 GOLGA2Q08379 1002 aa11.28□□□□□ -0.6
GABRE-210ENST00000489333 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
GABRE-210ENST00000489333 SSUH2Q9Y2M2 353 aa11.28□□□□□ -0.6
GABRE-210ENST00000489333 NSD2O96028 1365 aa11.28□□□□□ -0.6
GABRE-210ENST00000489333 IPO9Q96P70 1041 aaKnown RBP11.27□□□□□ -0.61
GABRE-210ENST00000489333 ORAI2Q96SN7 254 aa11.27□□□□□ -0.61
GABRE-210ENST00000489333 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
GABRE-210ENST00000489333 POLR3AO14802 1390 aaPredicted RBP11.27□□□□□ -0.61
GABRE-210ENST00000489333 CDK12Q9NYV4 1490 aaPredicted RBP11.26□□□□□ -0.61
GABRE-210ENST00000489333 CNGB1Q14028 1251 aaPredicted RBP11.25□□□□□ -0.61
GABRE-210ENST00000489333 NGLY1Q96IV0 654 aa11.25□□□□□ -0.61
GABRE-210ENST00000489333 QTRT2Q9H974 415 aaKnown RBP11.25□□□□□ -0.61
GABRE-210ENST00000489333 ZNF521Q96K83 1311 aa11.25□□□□□ -0.61
GABRE-210ENST00000489333 CENPJQ9HC77 1338 aaPredicted RBP11.25□□□□□ -0.61
GABRE-210ENST00000489333 RGS12O14924 1447 aa11.25□□□□□ -0.61
GABRE-210ENST00000489333 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 E9PSI1 815 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 CENPQQ7L2Z9 268 aaPredicted RBP11.24□□□□□ -0.61
GABRE-210ENST00000489333 DDRGK1Q96HY6 314 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 ZNF692Q9BU19 519 aaPredicted RBP11.24□□□□□ -0.61
GABRE-210ENST00000489333 C14orf93Q9H972 538 aaKnown RBP11.24□□□□□ -0.61
GABRE-210ENST00000489333 STK26Q9P289 416 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 ADAMTS8Q9UP79 889 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 SOS2Q07890 1332 aaPredicted RBP11.24□□□□□ -0.61
GABRE-210ENST00000489333 ADGRF5Q8IZF2 1346 aa11.24□□□□□ -0.61
GABRE-210ENST00000489333 COL22A1Q8NFW1 1626 aaPredicted RBP11.24□□□□□ -0.61
GABRE-210ENST00000489333 KNDC1Q76NI1 1749 aa11.23□□□□□ -0.61
GABRE-210ENST00000489333 MARF1Q9Y4F3 1742 aaKnown RBP11.23□□□□□ -0.61
GABRE-210ENST00000489333 RBM6P78332 1123 aaKnown RBP11.23□□□□□ -0.61
GABRE-210ENST00000489333 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
GABRE-210ENST00000489333 ZBTB47Q9UFB7 747 aaPredicted RBP11.23□□□□□ -0.61
GABRE-210ENST00000489333 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
GABRE-210ENST00000489333 XPCQ01831 940 aaPredicted RBP11.22□□□□□ -0.61
GABRE-210ENST00000489333 REM2Q8IYK8 340 aaPredicted RBP11.22□□□□□ -0.61
GABRE-210ENST00000489333 TRMT2AQ8IZ69 625 aaKnown RBP11.22□□□□□ -0.61
GABRE-210ENST00000489333 QRICH2Q9H0J4 1663 aa11.22□□□□□ -0.61
GABRE-210ENST00000489333 RGPD8O14715 1765 aaPredicted RBP11.21□□□□□ -0.61
GABRE-210ENST00000489333 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 CGNL1Q0VF96 1302 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 SLFN5Q08AF3 891 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 DUSP27Q5VZP5 1158 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 EXOC6Q8TAG9 804 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 CFAP53Q96M91 514 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 USP21Q9UK80 565 aa11.21□□□□□ -0.61
GABRE-210ENST00000489333 NPHP3Q7Z494 1330 aa11.2□□□□□ -0.62
GABRE-210ENST00000489333 TMEM132EQ6IEE7 984 aa11.2□□□□□ -0.62
GABRE-210ENST00000489333 USP35Q9P2H5 1018 aa11.2□□□□□ -0.62
GABRE-210ENST00000489333 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
GABRE-210ENST00000489333 PXDNQ92626 1479 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 PLEKHH1Q9ULM0 1364 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 EVC2Q86UK5 1308 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 FOXO3O43524 673 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 PDE3AQ14432 1141 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 BACH2Q9BYV9 841 aa11.19□□□□□ -0.62
GABRE-210ENST00000489333 TRPC5Q9UL62 973 aaPredicted RBP11.19□□□□□ -0.62
GABRE-210ENST00000489333 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms