RNA–Protein interactions for RNA: ENST00000489144.5

POLR2J3-205, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-205ENST00000489144 NME9Q86XW9 330 aa23.89■■□□□ 1.42
POLR2J3-205ENST00000489144 ATP7BP35670 1465 aa23.88■■□□□ 1.41
POLR2J3-205ENST00000489144 IPO9Q96P70 1041 aaKnown RBP23.86■■□□□ 1.41
POLR2J3-205ENST00000489144 PPM1GO15355 546 aaPredicted RBP23.86■■□□□ 1.41
POLR2J3-205ENST00000489144 CDCA7LQ96GN5 454 aa23.85■■□□□ 1.41
POLR2J3-205ENST00000489144 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
POLR2J3-205ENST00000489144 USP35Q9P2H5 1018 aa23.84■■□□□ 1.41
POLR2J3-205ENST00000489144 KDM4FA0A1W2PPD8 638 aa23.84■■□□□ 1.41
POLR2J3-205ENST00000489144 NPHP4O75161 1426 aaPredicted RBP23.83■■□□□ 1.41
POLR2J3-205ENST00000489144 ACEP12821 1306 aa23.83■■□□□ 1.4
POLR2J3-205ENST00000489144 DIP2AQ14689 1571 aa23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 XRN1Q8IZH2 1706 aaKnown RBP23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 ZBTB47Q9UFB7 747 aaPredicted RBP23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 BRPF3Q9ULD4 1205 aa23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 NKTRP30414 1462 aaKnown RBP23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 BLMP54132 1417 aaPredicted RBP23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 PTCH1Q13635 1447 aa23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 SOX12O15370 315 aa23.82■■□□□ 1.4
POLR2J3-205ENST00000489144 RGPD8O14715 1765 aaPredicted RBP23.8■■□□□ 1.4
POLR2J3-205ENST00000489144 CPSF1Q10570 1443 aaKnown RBP23.8■■□□□ 1.4
POLR2J3-205ENST00000489144 PPP4R2Q9NY27 417 aa23.8■■□□□ 1.4
POLR2J3-205ENST00000489144 C14orf37Q86TY3 774 aa23.79■■□□□ 1.4
POLR2J3-205ENST00000489144 APAF1O14727 1248 aa23.78■■□□□ 1.4
POLR2J3-205ENST00000489144 NSD2O96028 1365 aa23.78■■□□□ 1.4
POLR2J3-205ENST00000489144 CDC42BPGQ6DT37 1551 aa23.78■■□□□ 1.4
POLR2J3-205ENST00000489144 ANP32AP39687 249 aaKnown RBP23.78■■□□□ 1.4
POLR2J3-205ENST00000489144 ADGRB2O60241 1585 aa23.77■■□□□ 1.4
POLR2J3-205ENST00000489144 NEUROD2Q15784 382 aa23.77■■□□□ 1.4
POLR2J3-205ENST00000489144 KIF20BQ96Q89 1820 aa23.77■■□□□ 1.39
POLR2J3-205ENST00000489144 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
POLR2J3-205ENST00000489144 POLR3AO14802 1390 aaPredicted RBP23.76■■□□□ 1.39
POLR2J3-205ENST00000489144 U2SURPO15042 1029 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 RRS1Q15050 365 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 CHD2O14647 1828 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 EMILIN1Q9Y6C2 1016 aa23.75■■□□□ 1.39
POLR2J3-205ENST00000489144 EDC4Q6P2E9 1401 aaKnown RBP23.74■■□□□ 1.39
POLR2J3-205ENST00000489144 SHPRHQ149N8 1683 aa23.74■■□□□ 1.39
POLR2J3-205ENST00000489144 NUTM2GQ5VZR2 741 aa23.74■■□□□ 1.39
POLR2J3-205ENST00000489144 ITSN1Q15811 1721 aa23.73■■□□□ 1.39
POLR2J3-205ENST00000489144 U2AF1L5P0DN76 240 aaPredicted RBP23.73■■□□□ 1.39
POLR2J3-205ENST00000489144 U2AF1Q01081 240 aaKnown RBP eCLIP23.73■■□□□ 1.39
POLR2J3-205ENST00000489144 CFAP53Q96M91 514 aa23.73■■□□□ 1.39
POLR2J3-205ENST00000489144 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
POLR2J3-205ENST00000489144 PIK3R4Q99570 1358 aa23.71■■□□□ 1.39
POLR2J3-205ENST00000489144 TTC21BQ7Z4L5 1316 aa23.7■■□□□ 1.39
POLR2J3-205ENST00000489144 COG3Q96JB2 828 aa23.7■■□□□ 1.38
POLR2J3-205ENST00000489144 POLKQ9UBT6 870 aa23.7■■□□□ 1.38
POLR2J3-205ENST00000489144 SMG6Q86US8 1419 aaKnown RBP23.7■■□□□ 1.38
POLR2J3-205ENST00000489144 ANKRD26Q9UPS8 1709 aa23.7■■□□□ 1.38
POLR2J3-205ENST00000489144 TOPAZ1Q8N9V7 1692 aa23.7■■□□□ 1.38
POLR2J3-205ENST00000489144 MON2Q7Z3U7 1717 aa23.69■■□□□ 1.38
POLR2J3-205ENST00000489144 AKAP12Q02952 1782 aa23.69■■□□□ 1.38
POLR2J3-205ENST00000489144 PLEKHG3A1L390 1219 aa23.69■■□□□ 1.38
POLR2J3-205ENST00000489144 NEFMP07197 916 aa23.68■■□□□ 1.38
POLR2J3-205ENST00000489144 DMRT2Q9Y5R5 561 aa23.68■■□□□ 1.38
POLR2J3-205ENST00000489144 PROSER2Q86WR7 435 aaPredicted RBP23.67■■□□□ 1.38
POLR2J3-205ENST00000489144 ZNF692Q9BU19 519 aaPredicted RBP23.67■■□□□ 1.38
POLR2J3-205ENST00000489144 USP6P35125 1406 aa23.67■■□□□ 1.38
POLR2J3-205ENST00000489144 XPCQ01831 940 aaPredicted RBP23.66■■□□□ 1.38
POLR2J3-205ENST00000489144 FAM43AQ8N2R8 423 aa23.66■■□□□ 1.38
POLR2J3-205ENST00000489144 FGD1P98174 961 aa23.65■■□□□ 1.38
POLR2J3-205ENST00000489144 SPINK5Q9NQ38 1064 aaPredicted RBP23.65■■□□□ 1.38
POLR2J3-205ENST00000489144 ESCO1Q5FWF5 840 aa23.64■■□□□ 1.38
POLR2J3-205ENST00000489144 MAP2P11137 1827 aaKnown RBP23.64■■□□□ 1.37
POLR2J3-205ENST00000489144 ORAI2Q96SN7 254 aa23.62■■□□□ 1.37
POLR2J3-205ENST00000489144 PDE4CQ08493 712 aa23.62■■□□□ 1.37
POLR2J3-205ENST00000489144 TCP11L2Q8N4U5 519 aa23.62■■□□□ 1.37
POLR2J3-205ENST00000489144 DIAPH1O60610 1272 aaKnown RBP23.61■■□□□ 1.37
POLR2J3-205ENST00000489144 COL3A1P02461 1466 aaPredicted RBP23.61■■□□□ 1.37
POLR2J3-205ENST00000489144 FMN2Q9NZ56 1722 aa23.61■■□□□ 1.37
POLR2J3-205ENST00000489144 HMOX1P09601 288 aa23.61■■□□□ 1.37
POLR2J3-205ENST00000489144 NRKQ7Z2Y5 1582 aa23.6■■□□□ 1.37
POLR2J3-205ENST00000489144 A0A0U1RQG5 324 aaPredicted RBP23.6■■□□□ 1.37
POLR2J3-205ENST00000489144 RBM10P98175 930 aaKnown RBP23.59■■□□□ 1.37
POLR2J3-205ENST00000489144 AAMPQ13685 434 aa23.59■■□□□ 1.37
POLR2J3-205ENST00000489144 ADGRL3Q9HAR2 1447 aa23.59■■□□□ 1.37
POLR2J3-205ENST00000489144 RUNDC1Q96C34 613 aa23.58■■□□□ 1.37
POLR2J3-205ENST00000489144 PHF8Q9UPP1 1060 aa23.58■■□□□ 1.37
POLR2J3-205ENST00000489144 INSRP06213 1382 aa23.58■■□□□ 1.37
POLR2J3-205ENST00000489144 GSE1Q14687 1217 aa23.57■■□□□ 1.36
POLR2J3-205ENST00000489144 LMTK3Q96Q04 1460 aa23.57■■□□□ 1.36
POLR2J3-205ENST00000489144 ZNF521Q96K83 1311 aa23.57■■□□□ 1.36
POLR2J3-205ENST00000489144 FOXO3O43524 673 aa23.55■■□□□ 1.36
POLR2J3-205ENST00000489144 NLRP6P59044 892 aa23.55■■□□□ 1.36
POLR2J3-205ENST00000489144 STRCP1A6NGW2 1772 aa23.55■■□□□ 1.36
POLR2J3-205ENST00000489144 GOLGA2Q08379 1002 aa23.55■■□□□ 1.36
POLR2J3-205ENST00000489144 SSH2Q76I76 1423 aa23.55■■□□□ 1.36
POLR2J3-205ENST00000489144 DDX17Q92841 729 aaKnown RBP23.54■■□□□ 1.36
POLR2J3-205ENST00000489144 ABTB2Q8N961 1025 aa23.54■■□□□ 1.36
POLR2J3-205ENST00000489144 RCAN3Q9UKA8 241 aa23.54■■□□□ 1.36
POLR2J3-205ENST00000489144 PDE3BQ13370 1112 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 OVOS2A0A0J9YW53 1432 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 OVOS2Q6IE36 1432 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 ANKARQ7Z5J8 1434 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 TMEM94Q12767 1356 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 PLIN1O60240 522 aa23.53■■□□□ 1.36
POLR2J3-205ENST00000489144 PNPLA6Q8IY17 1366 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms