RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 TRIM26Q12899 539 aaPredicted RBP18.03■□□□□ 0.48
SRRM1-216ENST00000489130 GLI3P10071 1580 aa18.03■□□□□ 0.48
SRRM1-216ENST00000489130 CRYBG1Q9Y4K1 1723 aa18.03■□□□□ 0.48
SRRM1-216ENST00000489130 ROCK2O75116 1388 aaKnown RBP18.03■□□□□ 0.48
SRRM1-216ENST00000489130 ACEP12821 1306 aa18.01■□□□□ 0.47
SRRM1-216ENST00000489130 PAK3O75914 559 aaPredicted RBP18.01■□□□□ 0.47
SRRM1-216ENST00000489130 SRPK2P78362 688 aaKnown RBP18.01■□□□□ 0.47
SRRM1-216ENST00000489130 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
SRRM1-216ENST00000489130 ATAD2Q6PL18 1390 aa18.01■□□□□ 0.47
SRRM1-216ENST00000489130 FAM83GA6ND36 823 aa18■□□□□ 0.47
SRRM1-216ENST00000489130 VPS72Q15906 364 aa18■□□□□ 0.47
SRRM1-216ENST00000489130 PPIP5K1Q6PFW1 1433 aa17.99■□□□□ 0.47
SRRM1-216ENST00000489130 CABP2Q9NPB3 220 aa17.99■□□□□ 0.47
SRRM1-216ENST00000489130 COL14A1Q05707 1796 aaKnown RBP17.98■□□□□ 0.47
SRRM1-216ENST00000489130 NRAPQ86VF7 1730 aa17.98■□□□□ 0.47
SRRM1-216ENST00000489130 PHRF1Q9P1Y6 1649 aaKnown RBP17.96■□□□□ 0.47
SRRM1-216ENST00000489130 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
SRRM1-216ENST00000489130 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
SRRM1-216ENST00000489130 BTG4Q9NY30 223 aa17.95■□□□□ 0.46
SRRM1-216ENST00000489130 BRD4O60885 1362 aaPredicted RBP17.94■□□□□ 0.46
SRRM1-216ENST00000489130 EP400Q96L91 3159 aa17.93■□□□□ 0.46
SRRM1-216ENST00000489130 ONECUT3O60422 494 aaPredicted RBP17.93■□□□□ 0.46
SRRM1-216ENST00000489130 PRDM11Q9NQV5 511 aa17.93■□□□□ 0.46
SRRM1-216ENST00000489130 KIAA0232Q92628 1395 aa17.92■□□□□ 0.46
SRRM1-216ENST00000489130 USP6P35125 1406 aa17.92■□□□□ 0.46
SRRM1-216ENST00000489130 ABTB2Q8N961 1025 aa17.92■□□□□ 0.46
SRRM1-216ENST00000489130 CABP1Q9NZU7 370 aa17.92■□□□□ 0.46
SRRM1-216ENST00000489130 CCDC9Q9Y3X0 531 aaKnown RBP17.92■□□□□ 0.46
SRRM1-216ENST00000489130 USP19O94966 1318 aa17.92■□□□□ 0.46
SRRM1-216ENST00000489130 SBNO2Q9Y2G9 1366 aa17.91■□□□□ 0.46
SRRM1-216ENST00000489130 NRKQ7Z2Y5 1582 aa17.91■□□□□ 0.46
SRRM1-216ENST00000489130 NUTM2GQ5VZR2 741 aa17.91■□□□□ 0.46
SRRM1-216ENST00000489130 SEPT12Q8IYM1 358 aa17.91■□□□□ 0.46
SRRM1-216ENST00000489130 POTEDQ86YR6 584 aa17.9■□□□□ 0.46
SRRM1-216ENST00000489130 SSH2Q76I76 1423 aa17.89■□□□□ 0.46
SRRM1-216ENST00000489130 CARD11Q9BXL7 1154 aa17.89■□□□□ 0.45
SRRM1-216ENST00000489130 CPDO75976 1380 aa17.89■□□□□ 0.45
SRRM1-216ENST00000489130 ZC3H6P61129 1189 aaKnown RBP17.88■□□□□ 0.45
SRRM1-216ENST00000489130 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
SRRM1-216ENST00000489130 CCDC125Q86Z20 511 aa17.88■□□□□ 0.45
SRRM1-216ENST00000489130 BRWD3Q6RI45 1802 aa17.88■□□□□ 0.45
SRRM1-216ENST00000489130 CHRNA2Q15822 529 aa17.87■□□□□ 0.45
SRRM1-216ENST00000489130 SPATA31A5Q5VU36 1347 aa17.87■□□□□ 0.45
SRRM1-216ENST00000489130 SPATA31A7Q8IWB4 1347 aa17.87■□□□□ 0.45
SRRM1-216ENST00000489130 FAM98CQ17RN3 349 aaKnown RBP17.86■□□□□ 0.45
SRRM1-216ENST00000489130 GCP02774 474 aa17.85■□□□□ 0.45
SRRM1-216ENST00000489130 KRT27Q7Z3Y8 459 aa17.85■□□□□ 0.45
SRRM1-216ENST00000489130 LMO7Q8WWI1 1683 aa17.84■□□□□ 0.45
SRRM1-216ENST00000489130 SLIT3O75094 1523 aa17.84■□□□□ 0.45
SRRM1-216ENST00000489130 BLMP54132 1417 aaPredicted RBP17.84■□□□□ 0.45
SRRM1-216ENST00000489130 CPSF1Q10570 1443 aaKnown RBP17.84■□□□□ 0.45
SRRM1-216ENST00000489130 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
SRRM1-216ENST00000489130 PIK3C2AO00443 1686 aa17.83■□□□□ 0.45
SRRM1-216ENST00000489130 THSD7AQ9UPZ6 1657 aa17.83■□□□□ 0.45
SRRM1-216ENST00000489130 SPATA31A1Q5TZJ5 1347 aa17.83■□□□□ 0.44
SRRM1-216ENST00000489130 AKAP12Q02952 1782 aa17.83■□□□□ 0.44
SRRM1-216ENST00000489130 CAMTA1Q9Y6Y1 1673 aa17.83■□□□□ 0.44
SRRM1-216ENST00000489130 NLRP6P59044 892 aa17.82■□□□□ 0.44
SRRM1-216ENST00000489130 A0A0G2JS52 829 aa17.81■□□□□ 0.44
SRRM1-216ENST00000489130 MYT1Q01538 1121 aa17.81■□□□□ 0.44
SRRM1-216ENST00000489130 STRN4Q9NRL3 753 aa17.81■□□□□ 0.44
SRRM1-216ENST00000489130 TTC21BQ7Z4L5 1316 aa17.8■□□□□ 0.44
SRRM1-216ENST00000489130 TTC21AQ8NDW8 1320 aa17.8■□□□□ 0.44
SRRM1-216ENST00000489130 KTN1Q86UP2 1357 aaKnown RBP17.79■□□□□ 0.44
SRRM1-216ENST00000489130 COL5A2P05997 1499 aaPredicted RBP17.78■□□□□ 0.44
SRRM1-216ENST00000489130 CD163L1Q9NR16 1453 aa17.78■□□□□ 0.44
SRRM1-216ENST00000489130 EVA1CP58658 441 aa17.78■□□□□ 0.44
SRRM1-216ENST00000489130 MON2Q7Z3U7 1717 aa17.78■□□□□ 0.44
SRRM1-216ENST00000489130 AATKQ6ZMQ8 1374 aa17.78■□□□□ 0.44
SRRM1-216ENST00000489130 LARP1Q6PKG0 1096 aaKnown RBP17.77■□□□□ 0.44
SRRM1-216ENST00000489130 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
SRRM1-216ENST00000489130 BARGINQ6ZT62 677 aa17.76■□□□□ 0.43
SRRM1-216ENST00000489130 TESK2Q96S53 571 aa17.76■□□□□ 0.43
SRRM1-216ENST00000489130 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
SRRM1-216ENST00000489130 SF3B2Q13435 895 aaKnown RBP17.74■□□□□ 0.43
SRRM1-216ENST00000489130 KCNH5Q8NCM2 988 aa17.74■□□□□ 0.43
SRRM1-216ENST00000489130 USP35Q9P2H5 1018 aa17.74■□□□□ 0.43
SRRM1-216ENST00000489130 CLSPNQ9HAW4 1339 aa17.73■□□□□ 0.43
SRRM1-216ENST00000489130 SLC24A1O60721 1099 aa17.73■□□□□ 0.43
SRRM1-216ENST00000489130 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
SRRM1-216ENST00000489130 THRAP3Q9Y2W1 955 aaKnown RBP17.73■□□□□ 0.43
SRRM1-216ENST00000489130 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
SRRM1-216ENST00000489130 COL18A1P39060 1754 aa17.73■□□□□ 0.43
SRRM1-216ENST00000489130 CRB1P82279 1406 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 NFAT5O94916 1531 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 USP31Q70CQ4 1352 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 DEFB132Q7Z7B7 95 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 ARHGEF25Q86VW2 580 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 TMC1Q8TDI8 760 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 SLC12A5Q9H2X9 1139 aa17.72■□□□□ 0.43
SRRM1-216ENST00000489130 A0A1W2PP64 1363 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 NINLQ9Y2I6 1382 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 ZBTB7CA1YPR0 619 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 FAM182BQ5T319 152 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 HDGFL2Q7Z4V5 671 aaPredicted RBP17.71■□□□□ 0.43
SRRM1-216ENST00000489130 ZRANB1Q9UGI0 708 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
SRRM1-216ENST00000489130 EDC4Q6P2E9 1401 aaKnown RBP17.71■□□□□ 0.43
SRRM1-216ENST00000489130 TERF2IPQ9NYB0 399 aa17.7■□□□□ 0.42
SRRM1-216ENST00000489130 ABCC6O95255 1503 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms