RNA–Protein interactions for RNA: ENST00000489041.1

MTHFD2-208, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 2

Gene MTHFD2, Length 1,135 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-208ENST00000489041 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
MTHFD2-208ENST00000489041 SF3B2Q13435 895 aaKnown RBP12.1□□□□□ -0.47
MTHFD2-208ENST00000489041 SAFB2Q14151 953 aaKnown RBP eCLIP12.1□□□□□ -0.47
MTHFD2-208ENST00000489041 POGKQ9P215 609 aa12.1□□□□□ -0.47
MTHFD2-208ENST00000489041 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
MTHFD2-208ENST00000489041 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
MTHFD2-208ENST00000489041 FAM83GA6ND36 823 aa12.09□□□□□ -0.47
MTHFD2-208ENST00000489041 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
MTHFD2-208ENST00000489041 ARHGEF10O15013 1369 aa12.08□□□□□ -0.48
MTHFD2-208ENST00000489041 PMFBP1Q8TBY8 1022 aa12.08□□□□□ -0.48
MTHFD2-208ENST00000489041 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
MTHFD2-208ENST00000489041 MARF1Q9Y4F3 1742 aaKnown RBP12.08□□□□□ -0.48
MTHFD2-208ENST00000489041 KRT27Q7Z3Y8 459 aa12.07□□□□□ -0.48
MTHFD2-208ENST00000489041 DEFB132Q7Z7B7 95 aa12.07□□□□□ -0.48
MTHFD2-208ENST00000489041 FMN2Q9NZ56 1722 aa12.07□□□□□ -0.48
MTHFD2-208ENST00000489041 KIF1AQ12756 1690 aa12.06□□□□□ -0.48
MTHFD2-208ENST00000489041 KNDC1Q76NI1 1749 aa12.06□□□□□ -0.48
MTHFD2-208ENST00000489041 TRAK1Q9UPV9 953 aa12.06□□□□□ -0.48
MTHFD2-208ENST00000489041 NRXN1Q9ULB1 1477 aa12.06□□□□□ -0.48
MTHFD2-208ENST00000489041 IFT172Q9UG01 1749 aa12.06□□□□□ -0.48
MTHFD2-208ENST00000489041 GLI3P10071 1580 aa12.05□□□□□ -0.48
MTHFD2-208ENST00000489041 PRKAR2AP13861 404 aaKnown RBP12.05□□□□□ -0.48
MTHFD2-208ENST00000489041 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.05□□□□□ -0.48
MTHFD2-208ENST00000489041 CHADLQ6NUI6 762 aa12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 HIRIP3Q9BW71 556 aaPredicted RBP12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 BTG4Q9NY30 223 aa12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 KDM2AQ9Y2K7 1162 aa12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 GPRASP1Q5JY77 1395 aa12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
MTHFD2-208ENST00000489041 ANKARQ7Z5J8 1434 aa12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 A0A0G2JS52 829 aa12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 MYT1Q01538 1121 aa12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 STAC3Q96MF2 364 aa12.03□□□□□ -0.48
MTHFD2-208ENST00000489041 WASLO00401 505 aaPredicted RBP12.02□□□□□ -0.49
MTHFD2-208ENST00000489041 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
MTHFD2-208ENST00000489041 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 PAK3O75914 559 aaPredicted RBP12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 PRR29P0C7W0 189 aa12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 BAG6P46379 1132 aa12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 EIF3AQ14152 1382 aaKnown RBP12.01□□□□□ -0.49
MTHFD2-208ENST00000489041 EVX2Q03828 476 aa12□□□□□ -0.49
MTHFD2-208ENST00000489041 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
MTHFD2-208ENST00000489041 SPATA31A5Q5VU36 1347 aa11.99□□□□□ -0.49
MTHFD2-208ENST00000489041 SPATA31A7Q8IWB4 1347 aa11.99□□□□□ -0.49
MTHFD2-208ENST00000489041 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
MTHFD2-208ENST00000489041 RAB3GAP2Q9H2M9 1393 aa11.99□□□□□ -0.49
MTHFD2-208ENST00000489041 NWD2Q9ULI1 1742 aa11.98□□□□□ -0.49
MTHFD2-208ENST00000489041 PRDM11Q9NQV5 511 aa11.98□□□□□ -0.49
MTHFD2-208ENST00000489041 BRWD3Q6RI45 1802 aa11.97□□□□□ -0.49
MTHFD2-208ENST00000489041 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
MTHFD2-208ENST00000489041 NUDT16Q96DE0 195 aaKnown RBP11.97□□□□□ -0.49
MTHFD2-208ENST00000489041 PSDA5PKW4 1024 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-208ENST00000489041 HRCP23327 699 aa11.96□□□□□ -0.49
MTHFD2-208ENST00000489041 EN1Q05925 392 aaPredicted RBP11.96□□□□□ -0.49
MTHFD2-208ENST00000489041 FAM182BQ5T319 152 aa11.96□□□□□ -0.49
MTHFD2-208ENST00000489041 PLCH1Q4KWH8 1693 aa11.96□□□□□ -0.5
MTHFD2-208ENST00000489041 HAX1O00165 279 aa11.95□□□□□ -0.5
MTHFD2-208ENST00000489041 ADGRB2O60241 1585 aa11.95□□□□□ -0.5
MTHFD2-208ENST00000489041 TULP4Q9NRJ4 1543 aa11.95□□□□□ -0.5
MTHFD2-208ENST00000489041 CDK19Q9BWU1 502 aa11.94□□□□□ -0.5
MTHFD2-208ENST00000489041 SPATA31A1Q5TZJ5 1347 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 EVA1CP58658 441 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 ZC3H6P61129 1189 aaKnown RBP11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 CHRNA2Q15822 529 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 NBPF8Q3BBV2 869 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 PROM2Q8N271 834 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 STRN4Q9NRL3 753 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 CCDC61Q9Y6R9 512 aa11.93□□□□□ -0.5
MTHFD2-208ENST00000489041 KIAA0232Q92628 1395 aa11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 COL14A1Q05707 1796 aaKnown RBP11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 ABCA3Q99758 1704 aa11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 TRPM3Q9HCF6 1732 aaPredicted RBP11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 R3HDM1Q15032 1099 aaKnown RBP11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 NUTM2GQ5VZR2 741 aa11.92□□□□□ -0.5
MTHFD2-208ENST00000489041 ALS2Q96Q42 1657 aa11.91□□□□□ -0.5
MTHFD2-208ENST00000489041 PLEKHG3A1L390 1219 aa11.91□□□□□ -0.5
MTHFD2-208ENST00000489041 EZH2Q15910 746 aaKnown RBP11.91□□□□□ -0.5
MTHFD2-208ENST00000489041 ACEP12821 1306 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 TRIM37O94972 964 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 APBA3O96018 575 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 BARGINQ6ZT62 677 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 ABTB2Q8N961 1025 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 CAMKK2Q96RR4 588 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 USP35Q9P2H5 1018 aa11.9□□□□□ -0.5
MTHFD2-208ENST00000489041 NRAPQ86VF7 1730 aa11.89□□□□□ -0.51
MTHFD2-208ENST00000489041 PDE3BQ13370 1112 aa11.89□□□□□ -0.51
MTHFD2-208ENST00000489041 SP7Q8TDD2 431 aaPredicted RBP11.89□□□□□ -0.51
MTHFD2-208ENST00000489041 POLR3AO14802 1390 aaPredicted RBP11.89□□□□□ -0.51
MTHFD2-208ENST00000489041 DISP2A7MBM2 1401 aa11.88□□□□□ -0.51
MTHFD2-208ENST00000489041 ATP7BP35670 1465 aa11.88□□□□□ -0.51
MTHFD2-208ENST00000489041 LRP5O75197 1615 aa11.87□□□□□ -0.51
MTHFD2-208ENST00000489041 LARP1Q6PKG0 1096 aaKnown RBP11.87□□□□□ -0.51
MTHFD2-208ENST00000489041 NLRP13Q86W25 1043 aa11.87□□□□□ -0.51
MTHFD2-208ENST00000489041 TCP11L2Q8N4U5 519 aa11.87□□□□□ -0.51
MTHFD2-208ENST00000489041 GCP02774 474 aa11.86□□□□□ -0.51
MTHFD2-208ENST00000489041 SRPK2P78362 688 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms