RNA–Protein interactions for RNA: ENST00000489029.1

FAM53A-206, Transcript of family with sequence similarity 53 member A, humanhuman

TSL 3

Gene FAM53A, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53A-206ENST00000489029 BCL9LQ86UU0 1499 aa24.58■■□□□ 1.53
FAM53A-206ENST00000489029 NBPF8Q3BBV2 869 aa24.58■■□□□ 1.53
FAM53A-206ENST00000489029 PPIP5K1Q6PFW1 1433 aa24.56■■□□□ 1.52
FAM53A-206ENST00000489029 ACEP12821 1306 aa24.56■■□□□ 1.52
FAM53A-206ENST00000489029 CLSPNQ9HAW4 1339 aa24.56■■□□□ 1.52
FAM53A-206ENST00000489029 PAK3O75914 559 aaPredicted RBP24.55■■□□□ 1.52
FAM53A-206ENST00000489029 CARD11Q9BXL7 1154 aa24.55■■□□□ 1.52
FAM53A-206ENST00000489029 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
FAM53A-206ENST00000489029 RGS12O14924 1447 aa24.54■■□□□ 1.52
FAM53A-206ENST00000489029 PLCH1Q4KWH8 1693 aa24.54■■□□□ 1.52
FAM53A-206ENST00000489029 UNC5CLQ8IV45 518 aa24.54■■□□□ 1.52
FAM53A-206ENST00000489029 CABLES1Q8TDN4 633 aa24.53■■□□□ 1.52
FAM53A-206ENST00000489029 CABP2Q9NPB3 220 aa24.52■■□□□ 1.52
FAM53A-206ENST00000489029 COL14A1Q05707 1796 aaKnown RBP24.51■■□□□ 1.51
FAM53A-206ENST00000489029 ATAD2Q6PL18 1390 aa24.51■■□□□ 1.51
FAM53A-206ENST00000489029 GJD4Q96KN9 370 aaPredicted RBP24.49■■□□□ 1.51
FAM53A-206ENST00000489029 TIMELESSQ9UNS1 1208 aa24.49■■□□□ 1.51
FAM53A-206ENST00000489029 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
FAM53A-206ENST00000489029 PHRF1Q9P1Y6 1649 aaKnown RBP24.48■■□□□ 1.51
FAM53A-206ENST00000489029 USP6P35125 1406 aa24.45■■□□□ 1.51
FAM53A-206ENST00000489029 VPS72Q15906 364 aa24.45■■□□□ 1.5
FAM53A-206ENST00000489029 CABP1Q9NZU7 370 aa24.45■■□□□ 1.5
FAM53A-206ENST00000489029 FAM83GA6ND36 823 aa24.44■■□□□ 1.5
FAM53A-206ENST00000489029 PLEKHG5O94827 1062 aa24.44■■□□□ 1.5
FAM53A-206ENST00000489029 ZNF692Q9BU19 519 aaPredicted RBP24.44■■□□□ 1.5
FAM53A-206ENST00000489029 ABTB2Q8N961 1025 aa24.43■■□□□ 1.5
FAM53A-206ENST00000489029 NRAPQ86VF7 1730 aa24.43■■□□□ 1.5
FAM53A-206ENST00000489029 GLI3P10071 1580 aa24.42■■□□□ 1.5
FAM53A-206ENST00000489029 NLRP13Q86W25 1043 aa24.42■■□□□ 1.5
FAM53A-206ENST00000489029 AKAP12Q02952 1782 aa24.42■■□□□ 1.5
FAM53A-206ENST00000489029 USP19O94966 1318 aa24.41■■□□□ 1.5
FAM53A-206ENST00000489029 UPF1Q92900 1129 aaKnown RBP eCLIP24.41■■□□□ 1.5
FAM53A-206ENST00000489029 PUS7Q96PZ0 661 aaKnown RBP24.41■■□□□ 1.5
FAM53A-206ENST00000489029 PRDM11Q9NQV5 511 aa24.41■■□□□ 1.5
FAM53A-206ENST00000489029 NRKQ7Z2Y5 1582 aa24.4■■□□□ 1.5
FAM53A-206ENST00000489029 SSH2Q76I76 1423 aa24.38■■□□□ 1.49
FAM53A-206ENST00000489029 BTG4Q9NY30 223 aa24.38■■□□□ 1.49
FAM53A-206ENST00000489029 CPDO75976 1380 aa24.38■■□□□ 1.49
FAM53A-206ENST00000489029 KIAA0232Q92628 1395 aa24.37■■□□□ 1.49
FAM53A-206ENST00000489029 CPSF1Q10570 1443 aaKnown RBP24.36■■□□□ 1.49
FAM53A-206ENST00000489029 TTC21AQ8NDW8 1320 aa24.35■■□□□ 1.49
FAM53A-206ENST00000489029 CCDC9Q9Y3X0 531 aaKnown RBP24.35■■□□□ 1.49
FAM53A-206ENST00000489029 NINLQ9Y2I6 1382 aa24.34■■□□□ 1.49
FAM53A-206ENST00000489029 ONECUT3O60422 494 aaPredicted RBP24.34■■□□□ 1.49
FAM53A-206ENST00000489029 NUTM2GQ5VZR2 741 aa24.34■■□□□ 1.49
FAM53A-206ENST00000489029 MON2Q7Z3U7 1717 aa24.34■■□□□ 1.49
FAM53A-206ENST00000489029 SLIT3O75094 1523 aa24.33■■□□□ 1.49
FAM53A-206ENST00000489029 PIK3C2AO00443 1686 aa24.33■■□□□ 1.49
FAM53A-206ENST00000489029 KTN1Q86UP2 1357 aaKnown RBP24.31■■□□□ 1.48
FAM53A-206ENST00000489029 GCP02774 474 aa24.31■■□□□ 1.48
FAM53A-206ENST00000489029 NLRP6P59044 892 aa24.31■■□□□ 1.48
FAM53A-206ENST00000489029 ZC3H6P61129 1189 aaKnown RBP24.31■■□□□ 1.48
FAM53A-206ENST00000489029 TTC21BQ7Z4L5 1316 aa24.31■■□□□ 1.48
FAM53A-206ENST00000489029 ST20-MTHFSA0A0A6YYL1 179 aa24.3■■□□□ 1.48
FAM53A-206ENST00000489029 TESK2Q96S53 571 aa24.29■■□□□ 1.48
FAM53A-206ENST00000489029 LMO7Q8WWI1 1683 aa24.29■■□□□ 1.48
FAM53A-206ENST00000489029 SPATA31A5Q5VU36 1347 aa24.29■■□□□ 1.48
FAM53A-206ENST00000489029 SPATA31A7Q8IWB4 1347 aa24.29■■□□□ 1.48
FAM53A-206ENST00000489029 USP47Q96K76 1375 aa24.29■■□□□ 1.48
FAM53A-206ENST00000489029 HDGFL2Q7Z4V5 671 aaPredicted RBP24.28■■□□□ 1.48
FAM53A-206ENST00000489029 CCDC125Q86Z20 511 aa24.28■■□□□ 1.48
FAM53A-206ENST00000489029 SEPT12Q8IYM1 358 aa24.28■■□□□ 1.48
FAM53A-206ENST00000489029 CCER1Q8TC90 406 aaPredicted RBP24.28■■□□□ 1.48
FAM53A-206ENST00000489029 BRWD3Q6RI45 1802 aa24.28■■□□□ 1.48
FAM53A-206ENST00000489029 KCNH5Q8NCM2 988 aa24.27■■□□□ 1.48
FAM53A-206ENST00000489029 TERF2IPQ9NYB0 399 aa24.27■■□□□ 1.48
FAM53A-206ENST00000489029 CHRNA2Q15822 529 aa24.26■■□□□ 1.47
FAM53A-206ENST00000489029 USP54Q70EL1 1684 aa24.26■■□□□ 1.47
FAM53A-206ENST00000489029 TMC1Q8TDI8 760 aa24.25■■□□□ 1.47
FAM53A-206ENST00000489029 CD163L1Q9NR16 1453 aa24.25■■□□□ 1.47
FAM53A-206ENST00000489029 EDC4Q6P2E9 1401 aaKnown RBP24.24■■□□□ 1.47
FAM53A-206ENST00000489029 CAMTA1Q9Y6Y1 1673 aa24.24■■□□□ 1.47
FAM53A-206ENST00000489029 TMF1P82094 1093 aa24.23■■□□□ 1.47
FAM53A-206ENST00000489029 CDCA8Q53HL2 280 aa24.23■■□□□ 1.47
FAM53A-206ENST00000489029 SPATA31A1Q5TZJ5 1347 aa24.23■■□□□ 1.47
FAM53A-206ENST00000489029 AATKQ6ZMQ8 1374 aa24.23■■□□□ 1.47
FAM53A-206ENST00000489029 THSD7AQ9UPZ6 1657 aa24.22■■□□□ 1.47
FAM53A-206ENST00000489029 USP31Q70CQ4 1352 aa24.22■■□□□ 1.47
FAM53A-206ENST00000489029 EVA1CP58658 441 aa24.22■■□□□ 1.47
FAM53A-206ENST00000489029 ABCC6O95255 1503 aa24.21■■□□□ 1.47
FAM53A-206ENST00000489029 A0A0G2JS52 829 aa24.21■■□□□ 1.47
FAM53A-206ENST00000489029 MYT1Q01538 1121 aa24.21■■□□□ 1.47
FAM53A-206ENST00000489029 FAM98CQ17RN3 349 aaKnown RBP24.21■■□□□ 1.47
FAM53A-206ENST00000489029 KRT27Q7Z3Y8 459 aa24.21■■□□□ 1.47
FAM53A-206ENST00000489029 STRN4Q9NRL3 753 aa24.21■■□□□ 1.47
FAM53A-206ENST00000489029 SLC12A5Q9H2X9 1139 aa24.2■■□□□ 1.46
FAM53A-206ENST00000489029 COL5A2P05997 1499 aaPredicted RBP24.19■■□□□ 1.46
FAM53A-206ENST00000489029 A0A1W2PP64 1363 aa24.19■■□□□ 1.46
FAM53A-206ENST00000489029 BLMP54132 1417 aaPredicted RBP24.18■■□□□ 1.46
FAM53A-206ENST00000489029 THRAP3Q9Y2W1 955 aaKnown RBP24.18■■□□□ 1.46
FAM53A-206ENST00000489029 EP400Q96L91 3159 aa24.18■■□□□ 1.46
FAM53A-206ENST00000489029 BARGINQ6ZT62 677 aa24.17■■□□□ 1.46
FAM53A-206ENST00000489029 COL18A1P39060 1754 aa24.16■■□□□ 1.46
FAM53A-206ENST00000489029 NFAT5O94916 1531 aa24.16■■□□□ 1.46
FAM53A-206ENST00000489029 ARHGEF25Q86VW2 580 aa24.15■■□□□ 1.46
FAM53A-206ENST00000489029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.15■■□□□ 1.46
FAM53A-206ENST00000489029 CRB1P82279 1406 aa24.15■■□□□ 1.46
FAM53A-206ENST00000489029 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
FAM53A-206ENST00000489029 TCP11L2Q8N4U5 519 aa24.14■■□□□ 1.45
FAM53A-206ENST00000489029 SF3B2Q13435 895 aaKnown RBP24.12■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms