RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 WNT7BP56706 349 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 PRR20EP86478 221 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 PRR20CP86479 221 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 PRR20DP86480 221 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 PRR20BP86481 221 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 PRR20AP86496 221 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 NR6A1Q15406 480 aa8.36□□□□□ -1.07
RFC4-213ENST00000489028 TMEM259Q4ZIN3 620 aa8.35□□□□□ -1.07
RFC4-213ENST00000489028 RC3H1Q5TC82 1133 aaKnown RBP8.35□□□□□ -1.07
RFC4-213ENST00000489028 ZNF511Q8NB15 262 aa8.35□□□□□ -1.07
RFC4-213ENST00000489028 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
RFC4-213ENST00000489028 NRG2O14511 850 aaPredicted RBP8.33□□□□□ -1.08
RFC4-213ENST00000489028 FOXJ1Q92949 421 aa8.33□□□□□ -1.08
RFC4-213ENST00000489028 TRIM34Q9BYJ4 488 aa8.33□□□□□ -1.08
RFC4-213ENST00000489028 LCE2BO14633 110 aa8.32□□□□□ -1.08
RFC4-213ENST00000489028 C4orf48Q5BLP8 95 aa8.32□□□□□ -1.08
RFC4-213ENST00000489028 GJD4Q96KN9 370 aaPredicted RBP8.32□□□□□ -1.08
RFC4-213ENST00000489028 SNRKQ9NRH2 765 aa8.32□□□□□ -1.08
RFC4-213ENST00000489028 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
RFC4-213ENST00000489028 MTMR14Q8NCE2 650 aa8.31□□□□□ -1.08
RFC4-213ENST00000489028 SIAH2O43255 324 aa8.3□□□□□ -1.08
RFC4-213ENST00000489028 LAPTM4AQ15012 233 aa8.3□□□□□ -1.08
RFC4-213ENST00000489028 BANK1Q8NDB2 785 aa8.3□□□□□ -1.08
RFC4-213ENST00000489028 EHBP1Q8NDI1 1231 aa8.3□□□□□ -1.08
RFC4-213ENST00000489028 FKBPLQ9UIM3 349 aa8.3□□□□□ -1.08
RFC4-213ENST00000489028 TMEM132AQ24JP5 1023 aa8.29□□□□□ -1.08
RFC4-213ENST00000489028 SH3BP5LQ7L8J4 393 aa8.29□□□□□ -1.08
RFC4-213ENST00000489028 J3QL48 77 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 GPR37L1O60883 481 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 SH3RF1Q7Z6J0 888 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 CYP4X1Q8N118 509 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 ARMC2Q8NEN0 867 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 TLL2Q9Y6L7 1015 aa8.28□□□□□ -1.08
RFC4-213ENST00000489028 FAM187AA6NFU0 413 aa8.27□□□□□ -1.09
RFC4-213ENST00000489028 SMPD1P17405 629 aa8.27□□□□□ -1.09
RFC4-213ENST00000489028 NBPF14Q5TI25 921 aa8.27□□□□□ -1.09
RFC4-213ENST00000489028 SNIP1Q8TAD8 396 aaKnown RBP8.27□□□□□ -1.09
RFC4-213ENST00000489028 OCSTAMPQ9BR26 566 aa8.27□□□□□ -1.09
RFC4-213ENST00000489028 TTC24A2A3L6 582 aaPredicted RBP8.26□□□□□ -1.09
RFC4-213ENST00000489028 Q6ZNB5 142 aa8.26□□□□□ -1.09
RFC4-213ENST00000489028 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
RFC4-213ENST00000489028 GPKOWQ92917 476 aaPredicted RBP eCLIP8.25□□□□□ -1.09
RFC4-213ENST00000489028 C1QTNF2Q9BXJ5 285 aa8.25□□□□□ -1.09
RFC4-213ENST00000489028 AGERQ15109 404 aa8.24□□□□□ -1.09
RFC4-213ENST00000489028 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
RFC4-213ENST00000489028 BPHLQ86WA6 291 aaPredicted RBP8.24□□□□□ -1.09
RFC4-213ENST00000489028 ZC3H4Q9UPT8 1303 aaKnown RBP8.24□□□□□ -1.09
RFC4-213ENST00000489028 MAGEB6P1A0A0J9YX57 407 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 SOCS7O14512 581 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 DGAT1O75907 488 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 ALDH1A1P00352 501 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 PKDCCQ504Y2 493 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
RFC4-213ENST00000489028 MCM6Q14566 821 aa8.22□□□□□ -1.09
RFC4-213ENST00000489028 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
RFC4-213ENST00000489028 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
RFC4-213ENST00000489028 ARHGAP9Q9BRR9 750 aa8.22□□□□□ -1.09
RFC4-213ENST00000489028 MYT1Q01538 1121 aa8.21□□□□□ -1.1
RFC4-213ENST00000489028 HPS1Q92902 700 aa8.21□□□□□ -1.1
RFC4-213ENST00000489028 AVPP01185 164 aa8.2□□□□□ -1.1
RFC4-213ENST00000489028 MPNDQ8N594 471 aa8.2□□□□□ -1.1
RFC4-213ENST00000489028 CDK15Q96Q40 435 aa8.2□□□□□ -1.1
RFC4-213ENST00000489028 TBC1D2BQ9UPU7 963 aa8.2□□□□□ -1.1
RFC4-213ENST00000489028 ST8SIA5O15466 376 aa8.19□□□□□ -1.1
RFC4-213ENST00000489028 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
RFC4-213ENST00000489028 TRMT44Q8IYL2 757 aaKnown RBP8.19□□□□□ -1.1
RFC4-213ENST00000489028 ADAM32Q8TC27 787 aa8.19□□□□□ -1.1
RFC4-213ENST00000489028 GPSM3Q9Y4H4 160 aa8.19□□□□□ -1.1
RFC4-213ENST00000489028 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
RFC4-213ENST00000489028 FBXO45P0C2W1 286 aa8.18□□□□□ -1.1
RFC4-213ENST00000489028 GRM5P41594 1212 aa8.18□□□□□ -1.1
RFC4-213ENST00000489028 PTK2Q05397 1052 aa8.18□□□□□ -1.1
RFC4-213ENST00000489028 ARID5BQ14865 1188 aa8.18□□□□□ -1.1
RFC4-213ENST00000489028 PNMA1Q8ND90 353 aa8.18□□□□□ -1.1
RFC4-213ENST00000489028 ADH1CP00326 375 aa8.17□□□□□ -1.1
RFC4-213ENST00000489028 WASF2Q9Y6W5 498 aa8.17□□□□□ -1.1
RFC4-213ENST00000489028 NR3C2P08235 984 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 NNTQ13423 1086 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 IRF5Q13568 498 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 ZBTB33Q86T24 672 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 AAASQ9NRG9 546 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
RFC4-213ENST00000489028 ZBBXA8MT70 800 aa8.15□□□□□ -1.1
RFC4-213ENST00000489028 CRIPAKQ8N1N5 446 aa8.15□□□□□ -1.1
RFC4-213ENST00000489028 GDPD2Q9HCC8 539 aa8.15□□□□□ -1.1
RFC4-213ENST00000489028 APBB1O00213 710 aa8.14□□□□□ -1.11
RFC4-213ENST00000489028 FSHRP23945 695 aa8.14□□□□□ -1.11
RFC4-213ENST00000489028 VASH1Q7L8A9 365 aaPredicted RBP8.14□□□□□ -1.11
RFC4-213ENST00000489028 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
RFC4-213ENST00000489028 POM121Q96HA1 1249 aa8.14□□□□□ -1.11
RFC4-213ENST00000489028 SMCPP49901 116 aaPredicted RBP8.13□□□□□ -1.11
RFC4-213ENST00000489028 NR1H3Q13133 447 aa8.13□□□□□ -1.11
RFC4-213ENST00000489028 KLF16Q9BXK1 252 aaPredicted RBP8.13□□□□□ -1.11
RFC4-213ENST00000489028 COG6Q9Y2V7 657 aa8.13□□□□□ -1.11
RFC4-213ENST00000489028 AXIN1O15169 862 aa8.12□□□□□ -1.11
RFC4-213ENST00000489028 CTC1Q2NKJ3 1217 aa8.12□□□□□ -1.11
RFC4-213ENST00000489028 TIMP2P16035 220 aa8.11□□□□□ -1.11
RFC4-213ENST00000489028 ABL2P42684 1182 aa8.11□□□□□ -1.11
RFC4-213ENST00000489028 NR5A1Q13285 461 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms