RNA–Protein interactions for RNA: ENST00000488946.1

RPL13A-212, Transcript of ribosomal protein L13a, humanhuman

TSL 2

Gene RPL13A, Length 2,312 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-212ENST00000488946 TRMT2AQ8IZ69 625 aaKnown RBP18.58■□□□□ 0.56
RPL13A-212ENST00000488946 CFAP53Q96M91 514 aa18.58■□□□□ 0.56
RPL13A-212ENST00000488946 MON2Q7Z3U7 1717 aa18.58■□□□□ 0.56
RPL13A-212ENST00000488946 CDC42BPGQ6DT37 1551 aa18.57■□□□□ 0.56
RPL13A-212ENST00000488946 LTKP29376 864 aa18.57■□□□□ 0.56
RPL13A-212ENST00000488946 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
RPL13A-212ENST00000488946 SLFN5Q08AF3 891 aa18.57■□□□□ 0.56
RPL13A-212ENST00000488946 CPSF1Q10570 1443 aaKnown RBP18.56■□□□□ 0.56
RPL13A-212ENST00000488946 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
RPL13A-212ENST00000488946 FYB1O15117 783 aa18.56■□□□□ 0.56
RPL13A-212ENST00000488946 CABP1Q9NZU7 370 aa18.55■□□□□ 0.56
RPL13A-212ENST00000488946 DIP2AQ14689 1571 aa18.55■□□□□ 0.56
RPL13A-212ENST00000488946 NPHP4O75161 1426 aaPredicted RBP18.55■□□□□ 0.56
RPL13A-212ENST00000488946 WASLO00401 505 aaPredicted RBP18.55■□□□□ 0.56
RPL13A-212ENST00000488946 TOPAZ1Q8N9V7 1692 aa18.54■□□□□ 0.56
RPL13A-212ENST00000488946 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
RPL13A-212ENST00000488946 ITSN1Q15811 1721 aa18.54■□□□□ 0.56
RPL13A-212ENST00000488946 DAXXQ9UER7 740 aaPredicted RBP18.54■□□□□ 0.56
RPL13A-212ENST00000488946 PPIP5K1Q6PFW1 1433 aa18.53■□□□□ 0.56
RPL13A-212ENST00000488946 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
RPL13A-212ENST00000488946 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
RPL13A-212ENST00000488946 GGNBP2Q9H3C7 697 aa18.53■□□□□ 0.56
RPL13A-212ENST00000488946 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
RPL13A-212ENST00000488946 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
RPL13A-212ENST00000488946 ROBO2Q9HCK4 1378 aa18.52■□□□□ 0.56
RPL13A-212ENST00000488946 ANP32AP39687 249 aaKnown RBP18.52■□□□□ 0.56
RPL13A-212ENST00000488946 EDC4Q6P2E9 1401 aaKnown RBP18.52■□□□□ 0.56
RPL13A-212ENST00000488946 IPO9Q96P70 1041 aaKnown RBP18.52■□□□□ 0.56
RPL13A-212ENST00000488946 PHF23Q9BUL5 403 aaPredicted RBP18.51■□□□□ 0.55
RPL13A-212ENST00000488946 E9PSI1 815 aa18.51■□□□□ 0.55
RPL13A-212ENST00000488946 PNPLA6Q8IY17 1366 aa18.5■□□□□ 0.55
RPL13A-212ENST00000488946 PLEKHG5O94827 1062 aa18.5■□□□□ 0.55
RPL13A-212ENST00000488946 NRKQ7Z2Y5 1582 aa18.49■□□□□ 0.55
RPL13A-212ENST00000488946 PTPRUQ92729 1446 aa18.49■□□□□ 0.55
RPL13A-212ENST00000488946 EXOC6Q8TAG9 804 aa18.49■□□□□ 0.55
RPL13A-212ENST00000488946 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
RPL13A-212ENST00000488946 WWC1Q8IX03 1113 aa18.48■□□□□ 0.55
RPL13A-212ENST00000488946 PTCH1Q13635 1447 aa18.48■□□□□ 0.55
RPL13A-212ENST00000488946 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
RPL13A-212ENST00000488946 XRN1Q8IZH2 1706 aaKnown RBP18.47■□□□□ 0.55
RPL13A-212ENST00000488946 TCP11L2Q8N4U5 519 aa18.46■□□□□ 0.55
RPL13A-212ENST00000488946 NUDT16Q96DE0 195 aaKnown RBP18.46■□□□□ 0.55
RPL13A-212ENST00000488946 CCDC61Q9Y6R9 512 aa18.45■□□□□ 0.54
RPL13A-212ENST00000488946 ZBTB47Q9UFB7 747 aaPredicted RBP18.44■□□□□ 0.54
RPL13A-212ENST00000488946 PRR36Q9H6K5 1346 aa18.44■□□□□ 0.54
RPL13A-212ENST00000488946 PLIN1O60240 522 aa18.43■□□□□ 0.54
RPL13A-212ENST00000488946 U2AF1L5P0DN76 240 aaPredicted RBP18.43■□□□□ 0.54
RPL13A-212ENST00000488946 U2AF1Q01081 240 aaKnown RBP eCLIP18.43■□□□□ 0.54
RPL13A-212ENST00000488946 PODXL2Q9NZ53 605 aa18.43■□□□□ 0.54
RPL13A-212ENST00000488946 TBX22Q9Y458 520 aa18.43■□□□□ 0.54
RPL13A-212ENST00000488946 MAP2P11137 1827 aaKnown RBP18.43■□□□□ 0.54
RPL13A-212ENST00000488946 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
RPL13A-212ENST00000488946 SLC26A8Q96RN1 970 aa18.43■□□□□ 0.54
RPL13A-212ENST00000488946 CDK12Q9NYV4 1490 aaPredicted RBP18.42■□□□□ 0.54
RPL13A-212ENST00000488946 AATKQ6ZMQ8 1374 aa18.42■□□□□ 0.54
RPL13A-212ENST00000488946 PLEKHF1Q96S99 279 aa18.41■□□□□ 0.54
RPL13A-212ENST00000488946 CRBNQ96SW2 442 aa18.4■□□□□ 0.54
RPL13A-212ENST00000488946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.4■□□□□ 0.54
RPL13A-212ENST00000488946 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.4■□□□□ 0.54
RPL13A-212ENST00000488946 LRRC7Q96NW7 1537 aa18.39■□□□□ 0.54
RPL13A-212ENST00000488946 ZNF335Q9H4Z2 1342 aaPredicted RBP18.39■□□□□ 0.53
RPL13A-212ENST00000488946 NALCNQ8IZF0 1738 aa18.39■□□□□ 0.53
RPL13A-212ENST00000488946 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
RPL13A-212ENST00000488946 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
RPL13A-212ENST00000488946 ZNF692Q9BU19 519 aaPredicted RBP18.38■□□□□ 0.53
RPL13A-212ENST00000488946 POLKQ9UBT6 870 aa18.38■□□□□ 0.53
RPL13A-212ENST00000488946 PIK3R4Q99570 1358 aa18.38■□□□□ 0.53
RPL13A-212ENST00000488946 C20orf194Q5TEA3 1177 aa18.37■□□□□ 0.53
RPL13A-212ENST00000488946 NME9Q86XW9 330 aa18.37■□□□□ 0.53
RPL13A-212ENST00000488946 PLEKHG3A1L390 1219 aa18.36■□□□□ 0.53
RPL13A-212ENST00000488946 U2SURPO15042 1029 aaKnown RBP18.35■□□□□ 0.53
RPL13A-212ENST00000488946 AMOTL2Q9Y2J4 779 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 CHD2O14647 1828 aaKnown RBP18.35■□□□□ 0.53
RPL13A-212ENST00000488946 LTBP4Q8N2S1 1624 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 NEUROD2Q15784 382 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 OVOS2A0A0J9YW53 1432 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 USP6P35125 1406 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 OVOS2Q6IE36 1432 aa18.35■□□□□ 0.53
RPL13A-212ENST00000488946 KCNA6P17658 529 aa18.34■□□□□ 0.53
RPL13A-212ENST00000488946 TCERG1O14776 1098 aaKnown RBP18.34■□□□□ 0.53
RPL13A-212ENST00000488946 SSH2Q76I76 1423 aa18.34■□□□□ 0.53
RPL13A-212ENST00000488946 STRCP1A6NGW2 1772 aa18.33■□□□□ 0.53
RPL13A-212ENST00000488946 PNNQ9H307 717 aaKnown RBP18.33■□□□□ 0.53
RPL13A-212ENST00000488946 TMPOP42166 694 aaKnown RBP18.33■□□□□ 0.52
RPL13A-212ENST00000488946 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.52
RPL13A-212ENST00000488946 COG3Q96JB2 828 aa18.32■□□□□ 0.52
RPL13A-212ENST00000488946 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
RPL13A-212ENST00000488946 FCHSD2O94868 740 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 ANKARQ7Z5J8 1434 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 ACEP12821 1306 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 IL16Q14005 1332 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 TTC21BQ7Z4L5 1316 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 BCAR3O75815 825 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 ZRANB1Q9UGI0 708 aa18.31■□□□□ 0.52
RPL13A-212ENST00000488946 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
RPL13A-212ENST00000488946 TRIM35Q9UPQ4 493 aa18.3■□□□□ 0.52
RPL13A-212ENST00000488946 NWD1Q149M9 1564 aa18.3■□□□□ 0.52
RPL13A-212ENST00000488946 RGPD8O14715 1765 aaPredicted RBP18.3■□□□□ 0.52
RPL13A-212ENST00000488946 CERKQ8TCT0 537 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms