RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 TRPM3Q9HCF6 1732 aaPredicted RBP16.86■□□□□ 0.29
SNU13-208ENST00000488571 ANKARQ7Z5J8 1434 aa16.86■□□□□ 0.29
SNU13-208ENST00000488571 SEPT12Q8IYM1 358 aa16.85■□□□□ 0.29
SNU13-208ENST00000488571 ARHGEF10O15013 1369 aa16.85■□□□□ 0.29
SNU13-208ENST00000488571 NRAPQ86VF7 1730 aa16.84■□□□□ 0.29
SNU13-208ENST00000488571 ONECUT3O60422 494 aaPredicted RBP16.84■□□□□ 0.29
SNU13-208ENST00000488571 PLEKHG5O94827 1062 aa16.84■□□□□ 0.29
SNU13-208ENST00000488571 HAP1P54257 671 aaPredicted RBP16.84■□□□□ 0.29
SNU13-208ENST00000488571 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
SNU13-208ENST00000488571 POTEHQ6S545 545 aa16.83■□□□□ 0.28
SNU13-208ENST00000488571 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
SNU13-208ENST00000488571 ACIN1Q9UKV3 1341 aaKnown RBP16.83■□□□□ 0.28
SNU13-208ENST00000488571 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
SNU13-208ENST00000488571 DEFB132Q7Z7B7 95 aa16.82■□□□□ 0.28
SNU13-208ENST00000488571 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
SNU13-208ENST00000488571 POGKQ9P215 609 aa16.81■□□□□ 0.28
SNU13-208ENST00000488571 CRYBG1Q9Y4K1 1723 aa16.81■□□□□ 0.28
SNU13-208ENST00000488571 RAB3GAP2Q9H2M9 1393 aa16.8■□□□□ 0.28
SNU13-208ENST00000488571 PRR36Q9H6K5 1346 aa16.8■□□□□ 0.28
SNU13-208ENST00000488571 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
SNU13-208ENST00000488571 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
SNU13-208ENST00000488571 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
SNU13-208ENST00000488571 KRT27Q7Z3Y8 459 aa16.78■□□□□ 0.28
SNU13-208ENST00000488571 TRAK1Q9UPV9 953 aa16.78■□□□□ 0.28
SNU13-208ENST00000488571 COL14A1Q05707 1796 aaKnown RBP16.78■□□□□ 0.28
SNU13-208ENST00000488571 MINK1Q8N4C8 1332 aaPredicted RBP16.76■□□□□ 0.27
SNU13-208ENST00000488571 SF3B2Q13435 895 aaKnown RBP16.75■□□□□ 0.27
SNU13-208ENST00000488571 BTG4Q9NY30 223 aa16.75■□□□□ 0.27
SNU13-208ENST00000488571 EIF3AQ14152 1382 aaKnown RBP16.75■□□□□ 0.27
SNU13-208ENST00000488571 GPRASP1Q5JY77 1395 aa16.75■□□□□ 0.27
SNU13-208ENST00000488571 ARHGEF28Q8N1W1 1705 aaKnown RBP16.74■□□□□ 0.27
SNU13-208ENST00000488571 WASLO00401 505 aaPredicted RBP16.74■□□□□ 0.27
SNU13-208ENST00000488571 FAM98CQ17RN3 349 aaKnown RBP16.74■□□□□ 0.27
SNU13-208ENST00000488571 LRP5O75197 1615 aa16.74■□□□□ 0.27
SNU13-208ENST00000488571 THSD7AQ9UPZ6 1657 aa16.73■□□□□ 0.27
SNU13-208ENST00000488571 KDM2AQ9Y2K7 1162 aa16.73■□□□□ 0.27
SNU13-208ENST00000488571 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
SNU13-208ENST00000488571 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
SNU13-208ENST00000488571 ATP7BP35670 1465 aa16.72■□□□□ 0.27
SNU13-208ENST00000488571 A0A0G2JS52 829 aa16.71■□□□□ 0.27
SNU13-208ENST00000488571 MYT1Q01538 1121 aa16.71■□□□□ 0.27
SNU13-208ENST00000488571 SPATA31A5Q5VU36 1347 aa16.7■□□□□ 0.26
SNU13-208ENST00000488571 SPATA31A7Q8IWB4 1347 aa16.7■□□□□ 0.26
SNU13-208ENST00000488571 RGPD1P0DJD0 1748 aa16.7■□□□□ 0.26
SNU13-208ENST00000488571 PHRF1Q9P1Y6 1649 aaKnown RBP16.7■□□□□ 0.26
SNU13-208ENST00000488571 BAG6P46379 1132 aa16.69■□□□□ 0.26
SNU13-208ENST00000488571 NGDNQ8NEJ9 315 aaKnown RBP16.69■□□□□ 0.26
SNU13-208ENST00000488571 TNS1Q9HBL0 1735 aaKnown RBP16.69■□□□□ 0.26
SNU13-208ENST00000488571 FAM182BQ5T319 152 aa16.68■□□□□ 0.26
SNU13-208ENST00000488571 STAC3Q96MF2 364 aa16.68■□□□□ 0.26
SNU13-208ENST00000488571 TOPAZ1Q8N9V7 1692 aa16.68■□□□□ 0.26
SNU13-208ENST00000488571 PAK3O75914 559 aaPredicted RBP16.67■□□□□ 0.26
SNU13-208ENST00000488571 PRDM11Q9NQV5 511 aa16.67■□□□□ 0.26
SNU13-208ENST00000488571 PSDA5PKW4 1024 aaPredicted RBP16.66■□□□□ 0.26
SNU13-208ENST00000488571 EN1Q05925 392 aaPredicted RBP16.66■□□□□ 0.26
SNU13-208ENST00000488571 NUDT16Q96DE0 195 aaKnown RBP16.66■□□□□ 0.26
SNU13-208ENST00000488571 KIAA0232Q92628 1395 aa16.65■□□□□ 0.26
SNU13-208ENST00000488571 DISP2A7MBM2 1401 aa16.65■□□□□ 0.26
SNU13-208ENST00000488571 HRCP23327 699 aa16.64■□□□□ 0.25
SNU13-208ENST00000488571 SPATA31A1Q5TZJ5 1347 aa16.64■□□□□ 0.25
SNU13-208ENST00000488571 POLR3AO14802 1390 aaPredicted RBP16.64■□□□□ 0.25
SNU13-208ENST00000488571 CHRNA2Q15822 529 aa16.63■□□□□ 0.25
SNU13-208ENST00000488571 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
SNU13-208ENST00000488571 NRKQ7Z2Y5 1582 aa16.62■□□□□ 0.25
SNU13-208ENST00000488571 KIAA1210Q9ULL0 1709 aa16.62■□□□□ 0.25
SNU13-208ENST00000488571 NUTM2GQ5VZR2 741 aa16.61■□□□□ 0.25
SNU13-208ENST00000488571 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
SNU13-208ENST00000488571 AKT1S1Q96B36 256 aa16.6■□□□□ 0.25
SNU13-208ENST00000488571 ACEP12821 1306 aa16.6■□□□□ 0.25
SNU13-208ENST00000488571 LMO7Q8WWI1 1683 aa16.59■□□□□ 0.25
SNU13-208ENST00000488571 R3HDM1Q15032 1099 aaKnown RBP16.59■□□□□ 0.25
SNU13-208ENST00000488571 NBPF8Q3BBV2 869 aa16.59■□□□□ 0.25
SNU13-208ENST00000488571 STRN4Q9NRL3 753 aa16.59■□□□□ 0.25
SNU13-208ENST00000488571 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
SNU13-208ENST00000488571 CAMTA1Q9Y6Y1 1673 aa16.59■□□□□ 0.25
SNU13-208ENST00000488571 PLEKHG3A1L390 1219 aa16.58■□□□□ 0.24
SNU13-208ENST00000488571 EZH2Q15910 746 aaKnown RBP16.58■□□□□ 0.24
SNU13-208ENST00000488571 CCDC61Q9Y6R9 512 aa16.58■□□□□ 0.24
SNU13-208ENST00000488571 TRIM37O94972 964 aa16.57■□□□□ 0.24
SNU13-208ENST00000488571 FAM196AQ6ZSG2 479 aa16.57■□□□□ 0.24
SNU13-208ENST00000488571 CAMKK2Q96RR4 588 aa16.57■□□□□ 0.24
SNU13-208ENST00000488571 RREB1Q92766 1687 aa16.56■□□□□ 0.24
SNU13-208ENST00000488571 USP19O94966 1318 aa16.56■□□□□ 0.24
SNU13-208ENST00000488571 BARGINQ6ZT62 677 aa16.56■□□□□ 0.24
SNU13-208ENST00000488571 CPDO75976 1380 aa16.55■□□□□ 0.24
SNU13-208ENST00000488571 NBPF1Q3BBV0 1214 aa16.55■□□□□ 0.24
SNU13-208ENST00000488571 USP35Q9P2H5 1018 aa16.55■□□□□ 0.24
SNU13-208ENST00000488571 LARP1Q6PKG0 1096 aaKnown RBP16.54■□□□□ 0.24
SNU13-208ENST00000488571 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
SNU13-208ENST00000488571 ABTB2Q8N961 1025 aa16.54■□□□□ 0.24
SNU13-208ENST00000488571 NUP188Q5SRE5 1749 aa16.53■□□□□ 0.24
SNU13-208ENST00000488571 PPIP5K1Q6PFW1 1433 aa16.53■□□□□ 0.24
SNU13-208ENST00000488571 PARD3Q8TEW0 1356 aa16.52■□□□□ 0.24
SNU13-208ENST00000488571 EVA1CP58658 441 aa16.52■□□□□ 0.24
SNU13-208ENST00000488571 PARP4Q9UKK3 1724 aaKnown RBP16.52■□□□□ 0.24
SNU13-208ENST00000488571 APBA3O96018 575 aa16.51■□□□□ 0.23
SNU13-208ENST00000488571 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
SNU13-208ENST00000488571 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
SNU13-208ENST00000488571 COL5A2P05997 1499 aaPredicted RBP16.5■□□□□ 0.23
SNU13-208ENST00000488571 GCP02774 474 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms