RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 FAM98CQ17RN3 349 aaKnown RBP9.4□□□□□ -0.9
CDHR3-213ENST00000488386 CEBPAP49715 358 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-213ENST00000488386 LAPTM4BQ86VI4 370 aa9.39□□□□□ -0.91
CDHR3-213ENST00000488386 RBM46Q8TBY0 533 aaKnown RBP9.39□□□□□ -0.91
CDHR3-213ENST00000488386 CFDP1Q9UEE9 299 aaPredicted RBP9.39□□□□□ -0.91
CDHR3-213ENST00000488386 RCCD1A6NED2 376 aa9.38□□□□□ -0.91
CDHR3-213ENST00000488386 OATP04181 439 aa9.38□□□□□ -0.91
CDHR3-213ENST00000488386 HSPA2P54652 639 aa9.38□□□□□ -0.91
CDHR3-213ENST00000488386 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
CDHR3-213ENST00000488386 VPS8Q8N3P4 1428 aa9.38□□□□□ -0.91
CDHR3-213ENST00000488386 SUPT6HQ7KZ85 1726 aaKnown RBP9.37□□□□□ -0.91
CDHR3-213ENST00000488386 MLH3Q9UHC1 1453 aa9.37□□□□□ -0.91
CDHR3-213ENST00000488386 NCOA2Q15596 1464 aa9.36□□□□□ -0.91
CDHR3-213ENST00000488386 LMTK3Q96Q04 1460 aa9.36□□□□□ -0.91
CDHR3-213ENST00000488386 TRIM66O15016 1216 aa9.36□□□□□ -0.91
CDHR3-213ENST00000488386 KANK4Q5T7N3 995 aaPredicted RBP9.36□□□□□ -0.91
CDHR3-213ENST00000488386 AK7Q96M32 723 aa9.36□□□□□ -0.91
CDHR3-213ENST00000488386 DNAJB2P25686 324 aa9.35□□□□□ -0.91
CDHR3-213ENST00000488386 SWT1Q5T5J6 900 aaKnown RBP9.35□□□□□ -0.91
CDHR3-213ENST00000488386 SAMD7Q7Z3H4 446 aa9.35□□□□□ -0.91
CDHR3-213ENST00000488386 TMEM134Q9H6X4 195 aa9.35□□□□□ -0.91
CDHR3-213ENST00000488386 ATP7AQ04656 1500 aa9.35□□□□□ -0.91
CDHR3-213ENST00000488386 SPAG9O60271 1321 aaKnown RBP9.34□□□□□ -0.91
CDHR3-213ENST00000488386 INO80Q9ULG1 1556 aaPredicted RBP9.34□□□□□ -0.91
CDHR3-213ENST00000488386 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.34□□□□□ -0.91
CDHR3-213ENST00000488386 STAC3Q96MF2 364 aa9.34□□□□□ -0.91
CDHR3-213ENST00000488386 REPIN1Q9BWE0 567 aaKnown RBP9.34□□□□□ -0.91
CDHR3-213ENST00000488386 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
CDHR3-213ENST00000488386 REREQ9P2R6 1566 aa9.33□□□□□ -0.92
CDHR3-213ENST00000488386 BCAMP50895 628 aa9.33□□□□□ -0.92
CDHR3-213ENST00000488386 MDM2Q00987 491 aaPredicted RBP9.33□□□□□ -0.92
CDHR3-213ENST00000488386 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
CDHR3-213ENST00000488386 CAMSAP2Q08AD1 1489 aa9.33□□□□□ -0.92
CDHR3-213ENST00000488386 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
CDHR3-213ENST00000488386 C3P01024 1663 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 KIAA1107Q9UPP5 1409 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 GOLGA8CPA6NN73 597 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 MMRN1Q13201 1228 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 AMHR2Q16671 573 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 WNT2BQ93097 391 aa9.32□□□□□ -0.92
CDHR3-213ENST00000488386 AGLP35573 1532 aa9.31□□□□□ -0.92
CDHR3-213ENST00000488386 ANKK1Q8NFD2 765 aa9.31□□□□□ -0.92
CDHR3-213ENST00000488386 PLEKHH2Q8IVE3 1493 aa9.31□□□□□ -0.92
CDHR3-213ENST00000488386 CLTCQ00610 1675 aaKnown RBP9.3□□□□□ -0.92
CDHR3-213ENST00000488386 ADGBQ8N7X0 1667 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 A2MP01023 1474 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 SOWAHBA6NEL2 793 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 PDE4DQ08499 809 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 THSD4Q6ZMP0 1018 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 PARP9Q8IXQ6 854 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
CDHR3-213ENST00000488386 TMUB1Q9BVT8 246 aa9.3□□□□□ -0.92
CDHR3-213ENST00000488386 PREX1Q8TCU6 1659 aa9.29□□□□□ -0.92
CDHR3-213ENST00000488386 PLXNC1O60486 1568 aa9.29□□□□□ -0.92
CDHR3-213ENST00000488386 GGT6Q6P531 493 aa9.29□□□□□ -0.92
CDHR3-213ENST00000488386 LRCH3Q96II8 777 aa9.29□□□□□ -0.92
CDHR3-213ENST00000488386 ESF1Q9H501 851 aaKnown RBP9.29□□□□□ -0.92
CDHR3-213ENST00000488386 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.29□□□□□ -0.92
CDHR3-213ENST00000488386 CCDC141Q6ZP82 1450 aa9.28□□□□□ -0.92
CDHR3-213ENST00000488386 RNF40O75150 1001 aa9.27□□□□□ -0.93
CDHR3-213ENST00000488386 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-213ENST00000488386 GPBP1L1Q9HC44 474 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-213ENST00000488386 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
CDHR3-213ENST00000488386 DAXXQ9UER7 740 aaPredicted RBP9.27□□□□□ -0.93
CDHR3-213ENST00000488386 SLC10A3P09131 477 aa9.26□□□□□ -0.93
CDHR3-213ENST00000488386 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
CDHR3-213ENST00000488386 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
CDHR3-213ENST00000488386 UHRF1BP1Q6BDS2 1440 aa9.25□□□□□ -0.93
CDHR3-213ENST00000488386 CLCN1P35523 988 aa9.25□□□□□ -0.93
CDHR3-213ENST00000488386 MAP3K1Q13233 1512 aa9.25□□□□□ -0.93
CDHR3-213ENST00000488386 ZMYM3Q14202 1370 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 ARHGEF5Q12774 1597 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 STRCQ7RTU9 1775 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 MYOM3Q5VTT5 1437 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 MROH2AA6NES4 1674 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 DDX11L8A8MPP1 907 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 KIF3BO15066 747 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 PTPN5P54829 565 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 SLF2Q8IX21 1173 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 FAM217BQ9NTX9 383 aaPredicted RBP9.24□□□□□ -0.93
CDHR3-213ENST00000488386 WBP1LQ9NX94 342 aa9.24□□□□□ -0.93
CDHR3-213ENST00000488386 DHX29Q7Z478 1369 aaKnown RBP9.24□□□□□ -0.93
CDHR3-213ENST00000488386 RTEL1-TNFRSF6BF6WH68 1400 aa9.23□□□□□ -0.93
CDHR3-213ENST00000488386 MS4A1P11836 297 aa9.23□□□□□ -0.93
CDHR3-213ENST00000488386 BRPF1P55201 1214 aaPredicted RBP9.23□□□□□ -0.93
CDHR3-213ENST00000488386 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
CDHR3-213ENST00000488386 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
CDHR3-213ENST00000488386 CNTLNQ9NXG0 1405 aa9.22□□□□□ -0.93
CDHR3-213ENST00000488386 TSPY4P0CV99 314 aa9.22□□□□□ -0.93
CDHR3-213ENST00000488386 TSPY10P0CW01 314 aa9.22□□□□□ -0.93
CDHR3-213ENST00000488386 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
CDHR3-213ENST00000488386 MYO3AQ8NEV4 1616 aa9.21□□□□□ -0.93
CDHR3-213ENST00000488386 HDGFP51858 240 aaKnown RBP9.21□□□□□ -0.94
CDHR3-213ENST00000488386 TSR3Q9UJK0 312 aaKnown RBP9.21□□□□□ -0.94
CDHR3-213ENST00000488386 PTPRKQ15262 1439 aa9.21□□□□□ -0.94
CDHR3-213ENST00000488386 MAST1Q9Y2H9 1570 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CROCC2H7BZ55 1655 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 CD46P15529 392 aa9.2□□□□□ -0.94
CDHR3-213ENST00000488386 FBXO31Q5XUX0 539 aaPredicted RBP9.2□□□□□ -0.94
CDHR3-213ENST00000488386 RDH13Q8NBN7 331 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms