RNA–Protein interactions for RNA: ENST00000488254.6

NOLC1-207, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NOLC1, Length 2,441 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-207ENST00000488254 PSME1Q06323 249 aa13.83□□□□□ -0.2
NOLC1-207ENST00000488254 BRINP3Q76B58 766 aa13.83□□□□□ -0.2
NOLC1-207ENST00000488254 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
NOLC1-207ENST00000488254 SOX12O15370 315 aa13.82□□□□□ -0.2
NOLC1-207ENST00000488254 PIP4K2BP78356 416 aa13.82□□□□□ -0.2
NOLC1-207ENST00000488254 LMOD2Q6P5Q4 547 aa13.81□□□□□ -0.2
NOLC1-207ENST00000488254 CGNL1Q0VF96 1302 aa13.81□□□□□ -0.2
NOLC1-207ENST00000488254 POLR3AO14802 1390 aaPredicted RBP13.81□□□□□ -0.2
NOLC1-207ENST00000488254 USP6P35125 1406 aa13.81□□□□□ -0.2
NOLC1-207ENST00000488254 DCCP43146 1447 aa13.81□□□□□ -0.2
NOLC1-207ENST00000488254 TTC21BQ7Z4L5 1316 aa13.81□□□□□ -0.2
NOLC1-207ENST00000488254 MON2Q7Z3U7 1717 aa13.8□□□□□ -0.2
NOLC1-207ENST00000488254 ZNF692Q9BU19 519 aaPredicted RBP13.8□□□□□ -0.2
NOLC1-207ENST00000488254 SUPT16HQ9Y5B9 1047 aaKnown RBP13.8□□□□□ -0.2
NOLC1-207ENST00000488254 KRT28Q7Z3Y7 464 aa13.79□□□□□ -0.2
NOLC1-207ENST00000488254 EDC4Q6P2E9 1401 aaKnown RBP13.79□□□□□ -0.2
NOLC1-207ENST00000488254 MORC1Q86VD1 984 aa13.79□□□□□ -0.2
NOLC1-207ENST00000488254 UBAP1LF5GYI3 381 aa13.78□□□□□ -0.2
NOLC1-207ENST00000488254 ABTB2Q8N961 1025 aa13.78□□□□□ -0.2
NOLC1-207ENST00000488254 PARD3Q8TEW0 1356 aa13.77□□□□□ -0.21
NOLC1-207ENST00000488254 SSH2Q76I76 1423 aa13.76□□□□□ -0.21
NOLC1-207ENST00000488254 CERKQ8TCT0 537 aa13.76□□□□□ -0.21
NOLC1-207ENST00000488254 NRKQ7Z2Y5 1582 aa13.76□□□□□ -0.21
NOLC1-207ENST00000488254 NLRP6P59044 892 aa13.76□□□□□ -0.21
NOLC1-207ENST00000488254 KIF20BQ96Q89 1820 aa13.75□□□□□ -0.21
NOLC1-207ENST00000488254 PPP2R1AP30153 589 aa13.75□□□□□ -0.21
NOLC1-207ENST00000488254 SENP3-EIF4A1A0A087X0R7 540 aa13.74□□□□□ -0.21
NOLC1-207ENST00000488254 PIK3C2AO00443 1686 aa13.74□□□□□ -0.21
NOLC1-207ENST00000488254 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
NOLC1-207ENST00000488254 RRS1Q15050 365 aaKnown RBP13.74□□□□□ -0.21
NOLC1-207ENST00000488254 RALBP1Q15311 655 aa13.74□□□□□ -0.21
NOLC1-207ENST00000488254 CABLES1Q8TDN4 633 aa13.74□□□□□ -0.21
NOLC1-207ENST00000488254 ROBO1Q9Y6N7 1651 aa13.74□□□□□ -0.21
NOLC1-207ENST00000488254 COG3Q96JB2 828 aa13.73□□□□□ -0.21
NOLC1-207ENST00000488254 MRS2Q9HD23 443 aa13.73□□□□□ -0.21
NOLC1-207ENST00000488254 NPHP3Q7Z494 1330 aa13.73□□□□□ -0.21
NOLC1-207ENST00000488254 MYBBP1AQ9BQG0 1328 aaKnown RBP13.73□□□□□ -0.21
NOLC1-207ENST00000488254 TOM1O60784 492 aa13.72□□□□□ -0.21
NOLC1-207ENST00000488254 KIF1AQ12756 1690 aa13.72□□□□□ -0.21
NOLC1-207ENST00000488254 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
NOLC1-207ENST00000488254 EMILIN1Q9Y6C2 1016 aa13.71□□□□□ -0.21
NOLC1-207ENST00000488254 PXDNQ92626 1479 aa13.71□□□□□ -0.22
NOLC1-207ENST00000488254 ZBTB7CA1YPR0 619 aa13.71□□□□□ -0.22
NOLC1-207ENST00000488254 MTHFSP49914 203 aa13.71□□□□□ -0.22
NOLC1-207ENST00000488254 TRPM3Q9HCF6 1732 aaPredicted RBP13.7□□□□□ -0.22
NOLC1-207ENST00000488254 TTC21AQ8NDW8 1320 aa13.7□□□□□ -0.22
NOLC1-207ENST00000488254 FAM9BQ8IZU0 186 aa13.7□□□□□ -0.22
NOLC1-207ENST00000488254 MAP2P11137 1827 aaKnown RBP13.69□□□□□ -0.22
NOLC1-207ENST00000488254 OVOS2A0A0J9YW53 1432 aa13.69□□□□□ -0.22
NOLC1-207ENST00000488254 OVOS2Q6IE36 1432 aa13.69□□□□□ -0.22
NOLC1-207ENST00000488254 ANKRD26Q9UPS8 1709 aa13.69□□□□□ -0.22
NOLC1-207ENST00000488254 MARF1Q9Y4F3 1742 aaKnown RBP13.69□□□□□ -0.22
NOLC1-207ENST00000488254 NLRP13Q86W25 1043 aa13.69□□□□□ -0.22
NOLC1-207ENST00000488254 NSD2O96028 1365 aa13.69□□□□□ -0.22
NOLC1-207ENST00000488254 POLKQ9UBT6 870 aa13.68□□□□□ -0.22
NOLC1-207ENST00000488254 SOS2Q07890 1332 aaPredicted RBP13.68□□□□□ -0.22
NOLC1-207ENST00000488254 SPATA31A3Q5VYP0 1347 aa13.68□□□□□ -0.22
NOLC1-207ENST00000488254 CCER2I3L3R5 266 aa13.67□□□□□ -0.22
NOLC1-207ENST00000488254 ZC3H6P61129 1189 aaKnown RBP13.66□□□□□ -0.22
NOLC1-207ENST00000488254 ALS2Q96Q42 1657 aa13.66□□□□□ -0.22
NOLC1-207ENST00000488254 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
NOLC1-207ENST00000488254 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
NOLC1-207ENST00000488254 GCP02774 474 aa13.65□□□□□ -0.22
NOLC1-207ENST00000488254 USP31Q70CQ4 1352 aa13.65□□□□□ -0.22
NOLC1-207ENST00000488254 MAP3K19Q56UN5 1328 aa13.65□□□□□ -0.23
NOLC1-207ENST00000488254 MED1Q15648 1581 aaPredicted RBP13.64□□□□□ -0.23
NOLC1-207ENST00000488254 SBNO1A3KN83 1393 aa13.64□□□□□ -0.23
NOLC1-207ENST00000488254 HSP90AB2PQ58FF8 381 aa13.63□□□□□ -0.23
NOLC1-207ENST00000488254 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
NOLC1-207ENST00000488254 BRD4O60885 1362 aaPredicted RBP13.63□□□□□ -0.23
NOLC1-207ENST00000488254 CHRNA2Q15822 529 aa13.62□□□□□ -0.23
NOLC1-207ENST00000488254 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
NOLC1-207ENST00000488254 PHLPP1O60346 1717 aa13.62□□□□□ -0.23
NOLC1-207ENST00000488254 LTV1Q96GA3 475 aaPredicted RBP13.62□□□□□ -0.23
NOLC1-207ENST00000488254 PEAK1Q9H792 1746 aa13.61□□□□□ -0.23
NOLC1-207ENST00000488254 AMPHP49418 695 aa13.61□□□□□ -0.23
NOLC1-207ENST00000488254 LRRC59Q96AG4 307 aaKnown RBP13.61□□□□□ -0.23
NOLC1-207ENST00000488254 HAP1P54257 671 aaPredicted RBP13.6□□□□□ -0.23
NOLC1-207ENST00000488254 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
NOLC1-207ENST00000488254 USP19O94966 1318 aa13.6□□□□□ -0.23
NOLC1-207ENST00000488254 HSPA1LP34931 641 aa13.6□□□□□ -0.23
NOLC1-207ENST00000488254 AXIN2Q9Y2T1 843 aa13.6□□□□□ -0.23
NOLC1-207ENST00000488254 AHDC1Q5TGY3 1603 aaPredicted RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 LTN1O94822 1766 aa13.59□□□□□ -0.23
NOLC1-207ENST00000488254 NFAT5O94916 1531 aa13.59□□□□□ -0.23
NOLC1-207ENST00000488254 NUTM2BA6NNL0 878 aaPredicted RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 NUTM2EB1AL46 878 aaPredicted RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 U2SURPO15042 1029 aaKnown RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 NUTM2AQ8IVF1 878 aaPredicted RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 COL16A1Q07092 1604 aaPredicted RBP13.59□□□□□ -0.23
NOLC1-207ENST00000488254 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
NOLC1-207ENST00000488254 ARHGEF10O15013 1369 aa13.58□□□□□ -0.24
NOLC1-207ENST00000488254 CCDC146Q8IYE0 955 aa13.58□□□□□ -0.24
NOLC1-207ENST00000488254 IQSEC2Q5JU85 1478 aa13.58□□□□□ -0.24
NOLC1-207ENST00000488254 HOXC9P31274 260 aa13.58□□□□□ -0.24
NOLC1-207ENST00000488254 ARHGEF25Q86VW2 580 aa13.58□□□□□ -0.24
NOLC1-207ENST00000488254 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
NOLC1-207ENST00000488254 KIAA0232Q92628 1395 aa13.57□□□□□ -0.24
NOLC1-207ENST00000488254 ADAMTS2O95450 1211 aa13.57□□□□□ -0.24
NOLC1-207ENST00000488254 KCNH5Q8NCM2 988 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms