RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 A0A1W2PP64 1363 aa23.93■■□□□ 1.42
SHROOM1-205ENST00000488072 SSH2Q76I76 1423 aa23.93■■□□□ 1.42
SHROOM1-205ENST00000488072 KTN1Q86UP2 1357 aaKnown RBP23.91■■□□□ 1.42
SHROOM1-205ENST00000488072 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.91■■□□□ 1.42
SHROOM1-205ENST00000488072 SPATA31A6Q5VVP1 1343 aa23.9■■□□□ 1.42
SHROOM1-205ENST00000488072 TTC21BQ7Z4L5 1316 aa23.9■■□□□ 1.42
SHROOM1-205ENST00000488072 ALS2Q96Q42 1657 aa23.89■■□□□ 1.42
SHROOM1-205ENST00000488072 KIF7Q2M1P5 1343 aa23.89■■□□□ 1.42
SHROOM1-205ENST00000488072 ABTB2Q8N961 1025 aa23.89■■□□□ 1.41
SHROOM1-205ENST00000488072 SLC24A1O60721 1099 aa23.88■■□□□ 1.41
SHROOM1-205ENST00000488072 HDGFL2Q7Z4V5 671 aaPredicted RBP23.87■■□□□ 1.41
SHROOM1-205ENST00000488072 NME9Q86XW9 330 aa23.87■■□□□ 1.41
SHROOM1-205ENST00000488072 RGS17Q9UGC6 210 aaPredicted RBP23.87■■□□□ 1.41
SHROOM1-205ENST00000488072 AKAP12Q02952 1782 aa23.87■■□□□ 1.41
SHROOM1-205ENST00000488072 COL22A1Q8NFW1 1626 aaPredicted RBP23.87■■□□□ 1.41
SHROOM1-205ENST00000488072 CDCA8Q53HL2 280 aa23.86■■□□□ 1.41
SHROOM1-205ENST00000488072 MEX3CQ5U5Q3 659 aaKnown RBP23.86■■□□□ 1.41
SHROOM1-205ENST00000488072 ZNF692Q9BU19 519 aaPredicted RBP23.86■■□□□ 1.41
SHROOM1-205ENST00000488072 CARD14Q9BXL6 1004 aa23.86■■□□□ 1.41
SHROOM1-205ENST00000488072 ARHGEF10O15013 1369 aa23.86■■□□□ 1.41
SHROOM1-205ENST00000488072 C8orf37Q96NL8 207 aa23.85■■□□□ 1.41
SHROOM1-205ENST00000488072 TERF2IPQ9NYB0 399 aa23.85■■□□□ 1.41
SHROOM1-205ENST00000488072 MYOM1P52179 1685 aa23.85■■□□□ 1.41
SHROOM1-205ENST00000488072 WASHC2AQ641Q2 1341 aa23.84■■□□□ 1.41
SHROOM1-205ENST00000488072 NLRP6P59044 892 aa23.83■■□□□ 1.41
SHROOM1-205ENST00000488072 NRKQ7Z2Y5 1582 aa23.82■■□□□ 1.4
SHROOM1-205ENST00000488072 ANKRD36BQ8N2N9 1353 aa23.82■■□□□ 1.4
SHROOM1-205ENST00000488072 MON2Q7Z3U7 1717 aa23.81■■□□□ 1.4
SHROOM1-205ENST00000488072 SOX12O15370 315 aa23.81■■□□□ 1.4
SHROOM1-205ENST00000488072 ZEB1P37275 1124 aaPredicted RBP23.81■■□□□ 1.4
SHROOM1-205ENST00000488072 HAP1P54257 671 aaPredicted RBP23.81■■□□□ 1.4
SHROOM1-205ENST00000488072 PIK3C2AO00443 1686 aa23.8■■□□□ 1.4
SHROOM1-205ENST00000488072 NINLQ9Y2I6 1382 aa23.79■■□□□ 1.4
SHROOM1-205ENST00000488072 ZC3H6P61129 1189 aaKnown RBP23.79■■□□□ 1.4
SHROOM1-205ENST00000488072 PANK3Q9H999 370 aa23.79■■□□□ 1.4
SHROOM1-205ENST00000488072 CCDC7Q96M83 1385 aa23.78■■□□□ 1.4
SHROOM1-205ENST00000488072 EDC4Q6P2E9 1401 aaKnown RBP23.78■■□□□ 1.4
SHROOM1-205ENST00000488072 PHF23Q9BUL5 403 aaPredicted RBP23.78■■□□□ 1.4
SHROOM1-205ENST00000488072 ABCA3Q99758 1704 aa23.78■■□□□ 1.4
SHROOM1-205ENST00000488072 USP19O94966 1318 aa23.78■■□□□ 1.4
SHROOM1-205ENST00000488072 FAM83GA6ND36 823 aa23.77■■□□□ 1.4
SHROOM1-205ENST00000488072 FBLN1P23142 703 aa23.77■■□□□ 1.4
SHROOM1-205ENST00000488072 NGLY1Q96IV0 654 aa23.77■■□□□ 1.4
SHROOM1-205ENST00000488072 AFF2P51816 1311 aa23.77■■□□□ 1.4
SHROOM1-205ENST00000488072 TTC21AQ8NDW8 1320 aa23.77■■□□□ 1.4
SHROOM1-205ENST00000488072 NSD3Q9BZ95 1437 aa23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 CRYBG1Q9Y4K1 1723 aa23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 CHRNA2Q15822 529 aa23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 POTEAQ6S8J7 498 aa23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 NLRP13Q86W25 1043 aa23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 BRD4O60885 1362 aaPredicted RBP23.76■■□□□ 1.39
SHROOM1-205ENST00000488072 ZBTB7CA1YPR0 619 aa23.75■■□□□ 1.39
SHROOM1-205ENST00000488072 GGNBP2Q9H3C7 697 aa23.75■■□□□ 1.39
SHROOM1-205ENST00000488072 GCP02774 474 aa23.74■■□□□ 1.39
SHROOM1-205ENST00000488072 MARF1Q9Y4F3 1742 aaKnown RBP23.73■■□□□ 1.39
SHROOM1-205ENST00000488072 FYB1O15117 783 aa23.73■■□□□ 1.39
SHROOM1-205ENST00000488072 KIAA0232Q92628 1395 aa23.73■■□□□ 1.39
SHROOM1-205ENST00000488072 PHRF1Q9P1Y6 1649 aaKnown RBP23.73■■□□□ 1.39
SHROOM1-205ENST00000488072 USP31Q70CQ4 1352 aa23.71■■□□□ 1.39
SHROOM1-205ENST00000488072 SLIT3O75094 1523 aa23.69■■□□□ 1.38
SHROOM1-205ENST00000488072 OVOS2A0A0J9YW53 1432 aa23.68■■□□□ 1.38
SHROOM1-205ENST00000488072 OVOS2Q6IE36 1432 aa23.68■■□□□ 1.38
SHROOM1-205ENST00000488072 FNBP4Q8N3X1 1017 aaPredicted RBP23.68■■□□□ 1.38
SHROOM1-205ENST00000488072 PRDM11Q9NQV5 511 aa23.68■■□□□ 1.38
SHROOM1-205ENST00000488072 USP21Q9UK80 565 aa23.68■■□□□ 1.38
SHROOM1-205ENST00000488072 ILDR2Q71H61 639 aa23.67■■□□□ 1.38
SHROOM1-205ENST00000488072 BCL9LQ86UU0 1499 aa23.67■■□□□ 1.38
SHROOM1-205ENST00000488072 CNGB1Q14028 1251 aaPredicted RBP23.65■■□□□ 1.38
SHROOM1-205ENST00000488072 BTG4Q9NY30 223 aa23.65■■□□□ 1.38
SHROOM1-205ENST00000488072 SLIT2O94813 1529 aa23.64■■□□□ 1.38
SHROOM1-205ENST00000488072 COG3Q96JB2 828 aa23.64■■□□□ 1.37
SHROOM1-205ENST00000488072 QTRT2Q9H974 415 aaKnown RBP23.63■■□□□ 1.37
SHROOM1-205ENST00000488072 NFAT5O94916 1531 aa23.63■■□□□ 1.37
SHROOM1-205ENST00000488072 PER1O15534 1290 aaPredicted RBP23.62■■□□□ 1.37
SHROOM1-205ENST00000488072 ARHGEF25Q86VW2 580 aa23.62■■□□□ 1.37
SHROOM1-205ENST00000488072 AXIN2Q9Y2T1 843 aa23.62■■□□□ 1.37
SHROOM1-205ENST00000488072 ZNF772Q68DY9 489 aaPredicted RBP23.6■■□□□ 1.37
SHROOM1-205ENST00000488072 UNC5CLQ8IV45 518 aa23.6■■□□□ 1.37
SHROOM1-205ENST00000488072 STRN4Q9NRL3 753 aa23.6■■□□□ 1.37
SHROOM1-205ENST00000488072 CPDO75976 1380 aa23.6■■□□□ 1.37
SHROOM1-205ENST00000488072 TNNT2P45379 298 aaPredicted RBP23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 RRS1Q15050 365 aaKnown RBP23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 KCNH5Q8NCM2 988 aa23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 PLCH1Q4KWH8 1693 aa23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 CAMTA1Q9Y6Y1 1673 aa23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 CGNL1Q0VF96 1302 aa23.59■■□□□ 1.37
SHROOM1-205ENST00000488072 USP54Q70EL1 1684 aa23.58■■□□□ 1.37
SHROOM1-205ENST00000488072 AMER1Q5JTC6 1135 aaPredicted RBP23.58■■□□□ 1.37
SHROOM1-205ENST00000488072 KNSTRNQ9Y448 316 aa23.57■■□□□ 1.36
SHROOM1-205ENST00000488072 COL14A1Q05707 1796 aaKnown RBP23.57■■□□□ 1.36
SHROOM1-205ENST00000488072 ATRNO75882 1429 aa23.57■■□□□ 1.36
SHROOM1-205ENST00000488072 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
SHROOM1-205ENST00000488072 MAP3K19Q56UN5 1328 aa23.56■■□□□ 1.36
SHROOM1-205ENST00000488072 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
SHROOM1-205ENST00000488072 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
SHROOM1-205ENST00000488072 LARP1Q6PKG0 1096 aaKnown RBP23.54■■□□□ 1.36
SHROOM1-205ENST00000488072 TRPC5Q9UL62 973 aaPredicted RBP23.54■■□□□ 1.36
SHROOM1-205ENST00000488072 LMO7Q8WWI1 1683 aa23.54■■□□□ 1.36
SHROOM1-205ENST00000488072 AATKQ6ZMQ8 1374 aa23.53■■□□□ 1.36
SHROOM1-205ENST00000488072 COL18A1P39060 1754 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms