RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 MLECQ14165 292 aa10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 FMN1Q68DA7 1419 aa10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 SPNS2Q8IVW8 549 aa10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 KCTD12Q96CX2 325 aaKnown RBP10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 LRRIQ1Q96JM4 1722 aa10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 SCAPERQ9BY12 1400 aa10.37□□□□□ -0.75
TNFSF4-203ENST00000488053 PCF11O94913 1555 aaKnown RBP10.36□□□□□ -0.75
TNFSF4-203ENST00000488053 PLCH2O75038 1416 aa10.36□□□□□ -0.75
TNFSF4-203ENST00000488053 RDH13Q8NBN7 331 aa10.36□□□□□ -0.75
TNFSF4-203ENST00000488053 BCAMP50895 628 aa10.35□□□□□ -0.75
TNFSF4-203ENST00000488053 THSD4Q6ZMP0 1018 aa10.35□□□□□ -0.75
TNFSF4-203ENST00000488053 LMTK3Q96Q04 1460 aa10.35□□□□□ -0.75
TNFSF4-203ENST00000488053 FER1L4A9Z1Z3 1794 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 POGZQ7Z3K3 1410 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 MS4A1P11836 297 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 HSPA2P54652 639 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 DDRGK1Q96HY6 314 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 TSR3Q9UJK0 312 aaKnown RBP10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
TNFSF4-203ENST00000488053 CD46P15529 392 aa10.33□□□□□ -0.76
TNFSF4-203ENST00000488053 PPP4CP60510 307 aa10.33□□□□□ -0.76
TNFSF4-203ENST00000488053 CDK11AQ9UQ88 783 aaPredicted RBP10.33□□□□□ -0.76
TNFSF4-203ENST00000488053 ARHGAP5Q13017 1502 aa10.33□□□□□ -0.76
TNFSF4-203ENST00000488053 MAGI2Q86UL8 1455 aa10.32□□□□□ -0.76
TNFSF4-203ENST00000488053 SLC10A3P09131 477 aa10.32□□□□□ -0.76
TNFSF4-203ENST00000488053 EFCAB2Q5VUJ9 269 aa10.32□□□□□ -0.76
TNFSF4-203ENST00000488053 TROQ12816 1431 aaPredicted RBP10.32□□□□□ -0.76
TNFSF4-203ENST00000488053 RNF166Q96A37 237 aaPredicted RBP10.31□□□□□ -0.76
TNFSF4-203ENST00000488053 BEGAINQ9BUH8 593 aa10.31□□□□□ -0.76
TNFSF4-203ENST00000488053 PRR14Q9BWN1 585 aa10.31□□□□□ -0.76
TNFSF4-203ENST00000488053 ATP10AO60312 1499 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 CDC42BPBQ9Y5S2 1711 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 CFHP08603 1231 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 KMT5BQ4FZB7 885 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 CLIP1P30622 1438 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 C9orf84Q5VXU9 1444 aa10.3□□□□□ -0.76
TNFSF4-203ENST00000488053 GCGRP47871 477 aa10.29□□□□□ -0.76
TNFSF4-203ENST00000488053 NYAP1Q6ZVC0 841 aa10.29□□□□□ -0.76
TNFSF4-203ENST00000488053 AFAP1Q8N556 730 aa10.29□□□□□ -0.76
TNFSF4-203ENST00000488053 FBXO41Q8TF61 875 aa10.29□□□□□ -0.76
TNFSF4-203ENST00000488053 FAM117AQ9C073 453 aa10.29□□□□□ -0.76
TNFSF4-203ENST00000488053 CEBPAP49715 358 aaPredicted RBP10.28□□□□□ -0.76
TNFSF4-203ENST00000488053 DIXDC1Q155Q3 683 aa10.28□□□□□ -0.76
TNFSF4-203ENST00000488053 WBP1LQ9NX94 342 aa10.28□□□□□ -0.76
TNFSF4-203ENST00000488053 ZNF518AQ6AHZ1 1483 aa10.28□□□□□ -0.76
TNFSF4-203ENST00000488053 ARHGEF12Q9NZN5 1544 aa10.28□□□□□ -0.76
TNFSF4-203ENST00000488053 NUTM1Q86Y26 1132 aa10.27□□□□□ -0.77
TNFSF4-203ENST00000488053 KDM5CP41229 1560 aa10.26□□□□□ -0.77
TNFSF4-203ENST00000488053 PREX2Q70Z35 1606 aa10.26□□□□□ -0.77
TNFSF4-203ENST00000488053 CASKIN1Q8WXD9 1431 aa10.26□□□□□ -0.77
TNFSF4-203ENST00000488053 USP46P62068 366 aa10.26□□□□□ -0.77
TNFSF4-203ENST00000488053 DIP2CQ9Y2E4 1556 aa10.26□□□□□ -0.77
TNFSF4-203ENST00000488053 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 ITSN2Q9NZM3 1697 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 CCDC18Q5T9S5 1454 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 CDC42BPAQ5VT25 1732 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 KDM4AO75164 1064 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 PTPN5P54829 565 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 MMRN1Q13201 1228 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 IL27Q8NEV9 243 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 HCSTQ9UBK5 93 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
TNFSF4-203ENST00000488053 TRAPPC8Q9Y2L5 1435 aa10.24□□□□□ -0.77
TNFSF4-203ENST00000488053 ABCC1P33527 1531 aa10.24□□□□□ -0.77
TNFSF4-203ENST00000488053 PLEKHG3A1L390 1219 aa10.23□□□□□ -0.77
TNFSF4-203ENST00000488053 ACTN4O43707 911 aaKnown RBP10.23□□□□□ -0.77
TNFSF4-203ENST00000488053 APLP1P51693 650 aa10.23□□□□□ -0.77
TNFSF4-203ENST00000488053 GRIPAP1Q4V328 841 aa10.23□□□□□ -0.77
TNFSF4-203ENST00000488053 ZNF777Q9ULD5 760 aaPredicted RBP10.23□□□□□ -0.77
TNFSF4-203ENST00000488053 SPIRE2Q8WWL2 714 aa10.22□□□□□ -0.77
TNFSF4-203ENST00000488053 TBC1D2Q9BYX2 928 aa10.22□□□□□ -0.77
TNFSF4-203ENST00000488053 FYCO1Q9BQS8 1478 aa10.22□□□□□ -0.77
TNFSF4-203ENST00000488053 KIDINS220Q9ULH0 1771 aa10.21□□□□□ -0.77
TNFSF4-203ENST00000488053 MLH3Q9UHC1 1453 aa10.21□□□□□ -0.78
TNFSF4-203ENST00000488053 C3P01024 1663 aa10.21□□□□□ -0.78
TNFSF4-203ENST00000488053 ATP6V1AP38606 617 aa10.2□□□□□ -0.78
TNFSF4-203ENST00000488053 FUT2Q10981 343 aa10.2□□□□□ -0.78
TNFSF4-203ENST00000488053 SAMD9LQ8IVG5 1584 aa10.2□□□□□ -0.78
TNFSF4-203ENST00000488053 REREQ9P2R6 1566 aa10.2□□□□□ -0.78
TNFSF4-203ENST00000488053 SETD1BQ9UPS6 1966 aaKnown RBP10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 SYCP2Q9BX26 1530 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 HOXA2O43364 376 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 TMEM132AQ24JP5 1023 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 SH3D19Q5HYK7 790 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 GOPCQ9HD26 462 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 PCDHB3Q9Y5E6 796 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 STRCQ7RTU9 1775 aa10.19□□□□□ -0.78
TNFSF4-203ENST00000488053 UHRF1BP1Q6BDS2 1440 aa10.18□□□□□ -0.78
TNFSF4-203ENST00000488053 HNRNPMP52272 730 aaKnown RBP eCLIP10.18□□□□□ -0.78
TNFSF4-203ENST00000488053 MYSM1Q5VVJ2 828 aa10.18□□□□□ -0.78
TNFSF4-203ENST00000488053 SUPT6HQ7KZ85 1726 aaKnown RBP10.18□□□□□ -0.78
TNFSF4-203ENST00000488053 GPATCH8Q9UKJ3 1502 aaKnown RBP10.17□□□□□ -0.78
TNFSF4-203ENST00000488053 GJA5P36382 358 aa10.17□□□□□ -0.78
TNFSF4-203ENST00000488053 AGLP35573 1532 aa10.17□□□□□ -0.78
TNFSF4-203ENST00000488053 SPAG9O60271 1321 aaKnown RBP10.15□□□□□ -0.78
TNFSF4-203ENST00000488053 MOXD2PA6NHM9 499 aa10.15□□□□□ -0.78
TNFSF4-203ENST00000488053 NR1I2O75469 434 aa10.15□□□□□ -0.78
TNFSF4-203ENST00000488053 SKIV2LQ15477 1246 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms