RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 WDR4P57081 412 aaKnown RBP9.07□□□□□ -0.96
HMGB1P36-201ENST00000487709 MRPL14Q6P1L8 145 aaKnown RBP9.07□□□□□ -0.96
HMGB1P36-201ENST00000487709 PURBQ96QR8 312 aaKnown RBP9.07□□□□□ -0.96
HMGB1P36-201ENST00000487709 SOBPA7XYQ1 873 aa9.06□□□□□ -0.96
HMGB1P36-201ENST00000487709 GIGYF2Q6Y7W6 1299 aaKnown RBP9.06□□□□□ -0.96
HMGB1P36-201ENST00000487709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.06□□□□□ -0.96
HMGB1P36-201ENST00000487709 ADH1CP00326 375 aa9.05□□□□□ -0.96
HMGB1P36-201ENST00000487709 TIMP2P16035 220 aa9.05□□□□□ -0.96
HMGB1P36-201ENST00000487709 LORP23490 312 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P36-201ENST00000487709 SCARF1Q14162 830 aa9.05□□□□□ -0.96
HMGB1P36-201ENST00000487709 VSIG10Q8N0Z9 540 aa9.05□□□□□ -0.96
HMGB1P36-201ENST00000487709 SPDYE5A6NIY4 337 aa9.04□□□□□ -0.96
HMGB1P36-201ENST00000487709 ARID5BQ14865 1188 aa9.04□□□□□ -0.96
HMGB1P36-201ENST00000487709 DESI1Q6ICB0 168 aa9.04□□□□□ -0.96
HMGB1P36-201ENST00000487709 BEGAINQ9BUH8 593 aa9.04□□□□□ -0.96
HMGB1P36-201ENST00000487709 FAM174AQ8TBP5 190 aa9.03□□□□□ -0.96
HMGB1P36-201ENST00000487709 MPNDQ8N594 471 aa9.02□□□□□ -0.97
HMGB1P36-201ENST00000487709 FOXJ1Q92949 421 aa9.02□□□□□ -0.97
HMGB1P36-201ENST00000487709 TBC1D2Q9BYX2 928 aa9.02□□□□□ -0.97
HMGB1P36-201ENST00000487709 MAP10Q9P2G4 905 aa9.02□□□□□ -0.97
HMGB1P36-201ENST00000487709 CFAP99D6REC4 459 aa9.01□□□□□ -0.97
HMGB1P36-201ENST00000487709 AMHR2Q16671 573 aa9.01□□□□□ -0.97
HMGB1P36-201ENST00000487709 LYPD8Q6UX82 237 aa9.01□□□□□ -0.97
HMGB1P36-201ENST00000487709 BARGINQ6ZT62 677 aa9.01□□□□□ -0.97
HMGB1P36-201ENST00000487709 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
HMGB1P36-201ENST00000487709 RSBN1LQ6PCB5 846 aaPredicted RBP9□□□□□ -0.97
HMGB1P36-201ENST00000487709 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
HMGB1P36-201ENST00000487709 PCDHB15Q9Y5E8 787 aa9□□□□□ -0.97
HMGB1P36-201ENST00000487709 AGERQ15109 404 aa8.99□□□□□ -0.97
HMGB1P36-201ENST00000487709 KLF16Q9BXK1 252 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P36-201ENST00000487709 ZIC2O95409 532 aaPredicted RBP8.98□□□□□ -0.97
HMGB1P36-201ENST00000487709 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
HMGB1P36-201ENST00000487709 MAN1A2O60476 641 aa8.97□□□□□ -0.97
HMGB1P36-201ENST00000487709 ZMYND10O75800 440 aa8.97□□□□□ -0.97
HMGB1P36-201ENST00000487709 HRCP23327 699 aa8.97□□□□□ -0.97
HMGB1P36-201ENST00000487709 CSPP1Q1MSJ5 1256 aa8.97□□□□□ -0.97
HMGB1P36-201ENST00000487709 ZBTB3Q9H5J0 574 aa8.97□□□□□ -0.97
HMGB1P36-201ENST00000487709 F12P00748 615 aaPredicted RBP8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 NR3C2P08235 984 aa8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 CABLES1Q8TDN4 633 aa8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 TSC1Q92574 1164 aa8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 CDK15Q96Q40 435 aa8.96□□□□□ -0.98
HMGB1P36-201ENST00000487709 GJA5P36382 358 aa8.95□□□□□ -0.98
HMGB1P36-201ENST00000487709 DIXDC1Q155Q3 683 aa8.95□□□□□ -0.98
HMGB1P36-201ENST00000487709 C4orf48Q5BLP8 95 aa8.95□□□□□ -0.98
HMGB1P36-201ENST00000487709 ZC3H15Q8WU90 426 aaKnown RBP8.95□□□□□ -0.98
HMGB1P36-201ENST00000487709 SPTLC1O15269 473 aa8.94□□□□□ -0.98
HMGB1P36-201ENST00000487709 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
HMGB1P36-201ENST00000487709 BMP2P12643 396 aa8.94□□□□□ -0.98
HMGB1P36-201ENST00000487709 VSIG8P0DPA2 414 aa8.93□□□□□ -0.98
HMGB1P36-201ENST00000487709 NR5A1Q13285 461 aa8.93□□□□□ -0.98
HMGB1P36-201ENST00000487709 RIC3Q7Z5B4 369 aa8.93□□□□□ -0.98
HMGB1P36-201ENST00000487709 UPP2O95045 317 aa8.92□□□□□ -0.98
HMGB1P36-201ENST00000487709 BPHLQ86WA6 291 aaPredicted RBP8.92□□□□□ -0.98
HMGB1P36-201ENST00000487709 LINC00528Q8N1L1 170 aa8.92□□□□□ -0.98
HMGB1P36-201ENST00000487709 FSHRP23945 695 aa8.91□□□□□ -0.98
HMGB1P36-201ENST00000487709 GRM5P41594 1212 aa8.91□□□□□ -0.98
HMGB1P36-201ENST00000487709 PPFIA3O75145 1194 aa8.9□□□□□ -0.98
HMGB1P36-201ENST00000487709 PRPF38BQ5VTL8 546 aaKnown RBP8.9□□□□□ -0.98
HMGB1P36-201ENST00000487709 MEIOBQ8N635 442 aa8.9□□□□□ -0.98
HMGB1P36-201ENST00000487709 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P36-201ENST00000487709 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P36-201ENST00000487709 TRIM66O15016 1216 aa8.89□□□□□ -0.99
HMGB1P36-201ENST00000487709 NUTM2DQ5VT03 806 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P36-201ENST00000487709 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
HMGB1P36-201ENST00000487709 MAGEB6P1A0A0J9YX57 407 aa8.88□□□□□ -0.99
HMGB1P36-201ENST00000487709 QPCTQ16769 361 aa8.88□□□□□ -0.99
HMGB1P36-201ENST00000487709 DNMT3LQ9UJW3 386 aa8.88□□□□□ -0.99
HMGB1P36-201ENST00000487709 LIMD1Q9UGP4 676 aa8.87□□□□□ -0.99
HMGB1P36-201ENST00000487709 SOS2Q07890 1332 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P36-201ENST00000487709 VASH1Q7L8A9 365 aaPredicted RBP8.86□□□□□ -0.99
HMGB1P36-201ENST00000487709 NBPF14Q5TI25 921 aa8.85□□□□□ -0.99
HMGB1P36-201ENST00000487709 MYSM1Q5VVJ2 828 aa8.85□□□□□ -0.99
HMGB1P36-201ENST00000487709 ARMC2Q8NEN0 867 aa8.85□□□□□ -0.99
HMGB1P36-201ENST00000487709 C1QTNF2Q9BXJ5 285 aa8.85□□□□□ -0.99
HMGB1P36-201ENST00000487709 CARD14Q9BXL6 1004 aa8.85□□□□□ -0.99
HMGB1P36-201ENST00000487709 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
HMGB1P36-201ENST00000487709 CCDC116Q8IYX3 515 aa8.83□□□□□ -1
HMGB1P36-201ENST00000487709 HELBQ8NG08 1087 aaPredicted RBP8.83□□□□□ -1
HMGB1P36-201ENST00000487709 TSEN34Q9BSV6 310 aaKnown RBP8.83□□□□□ -1
HMGB1P36-201ENST00000487709 SH3BP5LQ7L8J4 393 aa8.82□□□□□ -1
HMGB1P36-201ENST00000487709 AK7Q96M32 723 aa8.82□□□□□ -1
HMGB1P36-201ENST00000487709 MAP4K5Q9Y4K4 846 aa8.82□□□□□ -1
HMGB1P36-201ENST00000487709 EMILIN1Q9Y6C2 1016 aa8.82□□□□□ -1
HMGB1P36-201ENST00000487709 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 TTLL8A6PVC2 850 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 LILRB3O75022 631 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 KRT76Q01546 638 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 CNTNAP3BQ96NU0 1288 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 CNTNAP3Q9BZ76 1288 aa8.81□□□□□ -1
HMGB1P36-201ENST00000487709 CBLBQ13191 982 aa8.8□□□□□ -1
HMGB1P36-201ENST00000487709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
HMGB1P36-201ENST00000487709 RTL5Q5HYW3 569 aaPredicted RBP8.8□□□□□ -1
HMGB1P36-201ENST00000487709 TRMT44Q8IYL2 757 aaKnown RBP8.8□□□□□ -1
HMGB1P36-201ENST00000487709 KCTD17Q8N5Z5 321 aa8.8□□□□□ -1
HMGB1P36-201ENST00000487709 GPR161Q8N6U8 529 aaKnown RBP8.8□□□□□ -1
HMGB1P36-201ENST00000487709 PTSQ03393 145 aa8.79□□□□□ -1
HMGB1P36-201ENST00000487709 LOC100996750A0A140TA64 210 aa8.78□□□□□ -1
HMGB1P36-201ENST00000487709 PDE4DQ08499 809 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms