RNA–Protein interactions for RNA: ENST00000487667.5

PHF1-209, Transcript of PHD finger protein 1, humanhuman

TSL 5

Gene PHF1, Length 1,930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-209ENST00000487667 RUNDC1Q96C34 613 aa26.88■■□□□ 1.89
PHF1-209ENST00000487667 USP6P35125 1406 aa26.88■■□□□ 1.89
PHF1-209ENST00000487667 SALL2Q9Y467 1007 aaPredicted RBP26.87■■□□□ 1.89
PHF1-209ENST00000487667 NRKQ7Z2Y5 1582 aa26.87■■□□□ 1.89
PHF1-209ENST00000487667 FMN2Q9NZ56 1722 aa26.87■■□□□ 1.89
PHF1-209ENST00000487667 PNNQ9H307 717 aaKnown RBP26.86■■□□□ 1.89
PHF1-209ENST00000487667 TTC21AQ8NDW8 1320 aa26.86■■□□□ 1.89
PHF1-209ENST00000487667 ZNF521Q96K83 1311 aa26.86■■□□□ 1.89
PHF1-209ENST00000487667 NWD1Q149M9 1564 aa26.86■■□□□ 1.89
PHF1-209ENST00000487667 COL3A1P02461 1466 aaPredicted RBP26.85■■□□□ 1.89
PHF1-209ENST00000487667 TTC21BQ7Z4L5 1316 aa26.85■■□□□ 1.89
PHF1-209ENST00000487667 RNF123Q5XPI4 1314 aa26.84■■□□□ 1.89
PHF1-209ENST00000487667 APAF1O14727 1248 aa26.84■■□□□ 1.89
PHF1-209ENST00000487667 GOLGA2Q08379 1002 aa26.84■■□□□ 1.89
PHF1-209ENST00000487667 NKTRP30414 1462 aaKnown RBP26.83■■□□□ 1.89
PHF1-209ENST00000487667 NME9Q86XW9 330 aa26.83■■□□□ 1.89
PHF1-209ENST00000487667 CCDC146Q8IYE0 955 aa26.83■■□□□ 1.89
PHF1-209ENST00000487667 ADGRL3Q9HAR2 1447 aa26.83■■□□□ 1.89
PHF1-209ENST00000487667 DIAPH1O60610 1272 aaKnown RBP26.82■■□□□ 1.88
PHF1-209ENST00000487667 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
PHF1-209ENST00000487667 SSH2Q76I76 1423 aa26.81■■□□□ 1.88
PHF1-209ENST00000487667 U2AF1L5P0DN76 240 aaPredicted RBP26.8■■□□□ 1.88
PHF1-209ENST00000487667 U2AF1Q01081 240 aaKnown RBP eCLIP26.8■■□□□ 1.88
PHF1-209ENST00000487667 NGDNQ8NEJ9 315 aaKnown RBP26.8■■□□□ 1.88
PHF1-209ENST00000487667 STRCQ7RTU9 1775 aa26.8■■□□□ 1.88
PHF1-209ENST00000487667 SENP3-EIF4A1A0A087X0R7 540 aa26.8■■□□□ 1.88
PHF1-209ENST00000487667 RBM33Q96EV2 1170 aaKnown RBP26.8■■□□□ 1.88
PHF1-209ENST00000487667 POLKQ9UBT6 870 aa26.8■■□□□ 1.88
PHF1-209ENST00000487667 CDK12Q9NYV4 1490 aaPredicted RBP26.79■■□□□ 1.88
PHF1-209ENST00000487667 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
PHF1-209ENST00000487667 NUTM2FA1L443 756 aa26.78■■□□□ 1.88
PHF1-209ENST00000487667 CCDC27Q2M243 656 aa26.77■■□□□ 1.88
PHF1-209ENST00000487667 RCAN3Q9UKA8 241 aa26.77■■□□□ 1.88
PHF1-209ENST00000487667 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.88
PHF1-209ENST00000487667 OVOS2A0A0J9YW53 1432 aa26.76■■□□□ 1.87
PHF1-209ENST00000487667 OVOS2Q6IE36 1432 aa26.76■■□□□ 1.87
PHF1-209ENST00000487667 IQSEC2Q5JU85 1478 aa26.76■■□□□ 1.87
PHF1-209ENST00000487667 PROSER2Q86WR7 435 aaPredicted RBP26.75■■□□□ 1.87
PHF1-209ENST00000487667 CDCA7LQ96GN5 454 aa26.75■■□□□ 1.87
PHF1-209ENST00000487667 E9PSI1 815 aa26.75■■□□□ 1.87
PHF1-209ENST00000487667 USP31Q70CQ4 1352 aa26.74■■□□□ 1.87
PHF1-209ENST00000487667 RGPD8O14715 1765 aaPredicted RBP26.74■■□□□ 1.87
PHF1-209ENST00000487667 U2SURPO15042 1029 aaKnown RBP26.73■■□□□ 1.87
PHF1-209ENST00000487667 TCP11L2Q8N4U5 519 aa26.73■■□□□ 1.87
PHF1-209ENST00000487667 SLFN5Q08AF3 891 aa26.73■■□□□ 1.87
PHF1-209ENST00000487667 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
PHF1-209ENST00000487667 FCHSD2O94868 740 aa26.71■■□□□ 1.87
PHF1-209ENST00000487667 C14orf37Q86TY3 774 aa26.71■■□□□ 1.87
PHF1-209ENST00000487667 TRMT2AQ8IZ69 625 aaKnown RBP26.71■■□□□ 1.87
PHF1-209ENST00000487667 MAPK8IP3Q9UPT6 1336 aa26.7■■□□□ 1.87
PHF1-209ENST00000487667 NCOA3Q9Y6Q9 1424 aa26.7■■□□□ 1.87
PHF1-209ENST00000487667 DUSP27Q5VZP5 1158 aa26.7■■□□□ 1.86
PHF1-209ENST00000487667 WDR63Q8IWG1 891 aa26.7■■□□□ 1.86
PHF1-209ENST00000487667 PHF23Q9BUL5 403 aaPredicted RBP26.7■■□□□ 1.86
PHF1-209ENST00000487667 DMRT2Q9Y5R5 561 aa26.7■■□□□ 1.86
PHF1-209ENST00000487667 NEFMP07197 916 aa26.69■■□□□ 1.86
PHF1-209ENST00000487667 WWC1Q8IX03 1113 aa26.69■■□□□ 1.86
PHF1-209ENST00000487667 PHF8Q9UPP1 1060 aa26.69■■□□□ 1.86
PHF1-209ENST00000487667 LRRC7Q96NW7 1537 aa26.69■■□□□ 1.86
PHF1-209ENST00000487667 PPM1GO15355 546 aaPredicted RBP26.68■■□□□ 1.86
PHF1-209ENST00000487667 ZRANB1Q9UGI0 708 aa26.68■■□□□ 1.86
PHF1-209ENST00000487667 PPP4R2Q9NY27 417 aa26.67■■□□□ 1.86
PHF1-209ENST00000487667 PLEKHF1Q96S99 279 aa26.67■■□□□ 1.86
PHF1-209ENST00000487667 EMILIN1Q9Y6C2 1016 aa26.66■■□□□ 1.86
PHF1-209ENST00000487667 USP54Q70EL1 1684 aa26.65■■□□□ 1.86
PHF1-209ENST00000487667 RRP1P56182 461 aaKnown RBP26.65■■□□□ 1.86
PHF1-209ENST00000487667 ZNF335Q9H4Z2 1342 aaPredicted RBP26.63■■□□□ 1.85
PHF1-209ENST00000487667 IL13P35225 146 aa26.63■■□□□ 1.85
PHF1-209ENST00000487667 IRX6P78412 446 aaPredicted RBP26.62■■□□□ 1.85
PHF1-209ENST00000487667 C19orf44Q9H6X5 657 aa26.62■■□□□ 1.85
PHF1-209ENST00000487667 STRCP1A6NGW2 1772 aa26.62■■□□□ 1.85
PHF1-209ENST00000487667 KIF24Q5T7B8 1368 aa26.62■■□□□ 1.85
PHF1-209ENST00000487667 TMEM94Q12767 1356 aa26.61■■□□□ 1.85
PHF1-209ENST00000487667 DCCP43146 1447 aa26.6■■□□□ 1.85
PHF1-209ENST00000487667 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
PHF1-209ENST00000487667 RRS1Q15050 365 aaKnown RBP26.6■■□□□ 1.85
PHF1-209ENST00000487667 TMPOP42166 694 aaKnown RBP26.59■■□□□ 1.85
PHF1-209ENST00000487667 FBLN1P23142 703 aa26.58■■□□□ 1.85
PHF1-209ENST00000487667 NEUROD2Q15784 382 aa26.58■■□□□ 1.85
PHF1-209ENST00000487667 ESCO1Q5FWF5 840 aa26.58■■□□□ 1.85
PHF1-209ENST00000487667 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.58■■□□□ 1.85
PHF1-209ENST00000487667 RSPH6AQ9H0K4 717 aa26.58■■□□□ 1.85
PHF1-209ENST00000487667 MYH16Q9H6N6 1097 aa26.57■■□□□ 1.84
PHF1-209ENST00000487667 NLRP6P59044 892 aa26.57■■□□□ 1.84
PHF1-209ENST00000487667 RRP7AQ9Y3A4 280 aaKnown RBP26.56■■□□□ 1.84
PHF1-209ENST00000487667 IL16Q14005 1332 aa26.56■■□□□ 1.84
PHF1-209ENST00000487667 SBNO1A3KN83 1393 aa26.56■■□□□ 1.84
PHF1-209ENST00000487667 KIF1AQ12756 1690 aa26.55■■□□□ 1.84
PHF1-209ENST00000487667 FLT4P35916 1363 aa26.55■■□□□ 1.84
PHF1-209ENST00000487667 PSME1Q06323 249 aa26.55■■□□□ 1.84
PHF1-209ENST00000487667 ABTB2Q8N961 1025 aa26.55■■□□□ 1.84
PHF1-209ENST00000487667 PRKAR2BP31323 418 aa26.53■■□□□ 1.84
PHF1-209ENST00000487667 PAK3O75914 559 aaPredicted RBP26.51■■□□□ 1.83
PHF1-209ENST00000487667 ATF3P18847 181 aa26.51■■□□□ 1.83
PHF1-209ENST00000487667 SPINK5Q9NQ38 1064 aaPredicted RBP26.51■■□□□ 1.83
PHF1-209ENST00000487667 RIPK4P57078 832 aa26.51■■□□□ 1.83
PHF1-209ENST00000487667 CALD1Q05682 793 aaKnown RBP26.51■■□□□ 1.83
PHF1-209ENST00000487667 C1orf167Q5SNV9 1468 aa26.5■■□□□ 1.83
PHF1-209ENST00000487667 MAP3K19Q56UN5 1328 aa26.49■■□□□ 1.83
PHF1-209ENST00000487667 CT47B1P0C2W7 299 aaPredicted RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms