RNA–Protein interactions for RNA: ENST00000487575.6

CBWD1-215, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,877 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-215ENST00000487575 LMTK3Q96Q04 1460 aa9.45□□□□□ -0.9
CBWD1-215ENST00000487575 PPIP5K1Q6PFW1 1433 aa9.45□□□□□ -0.9
CBWD1-215ENST00000487575 CD163L1Q9NR16 1453 aa9.45□□□□□ -0.9
CBWD1-215ENST00000487575 PPP2R1AP30153 589 aa9.44□□□□□ -0.9
CBWD1-215ENST00000487575 PRR36Q9H6K5 1346 aa9.44□□□□□ -0.9
CBWD1-215ENST00000487575 NWD1Q149M9 1564 aa9.44□□□□□ -0.9
CBWD1-215ENST00000487575 MORC1Q86VD1 984 aa9.43□□□□□ -0.9
CBWD1-215ENST00000487575 FAM9BQ8IZU0 186 aa9.43□□□□□ -0.9
CBWD1-215ENST00000487575 CPSF1Q10570 1443 aaKnown RBP9.43□□□□□ -0.9
CBWD1-215ENST00000487575 PLEKHG3A1L390 1219 aa9.42□□□□□ -0.9
CBWD1-215ENST00000487575 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
CBWD1-215ENST00000487575 ANKARQ7Z5J8 1434 aa9.42□□□□□ -0.9
CBWD1-215ENST00000487575 CDC42BPGQ6DT37 1551 aa9.42□□□□□ -0.9
CBWD1-215ENST00000487575 NKTRP30414 1462 aaKnown RBP9.42□□□□□ -0.9
CBWD1-215ENST00000487575 EDC4Q6P2E9 1401 aaKnown RBP9.41□□□□□ -0.9
CBWD1-215ENST00000487575 ADGRL3Q9HAR2 1447 aa9.41□□□□□ -0.9
CBWD1-215ENST00000487575 PROSER2Q86WR7 435 aaPredicted RBP9.41□□□□□ -0.9
CBWD1-215ENST00000487575 TOPAZ1Q8N9V7 1692 aa9.41□□□□□ -0.9
CBWD1-215ENST00000487575 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
CBWD1-215ENST00000487575 FYB1O15117 783 aa9.4□□□□□ -0.9
CBWD1-215ENST00000487575 C14orf37Q86TY3 774 aa9.4□□□□□ -0.9
CBWD1-215ENST00000487575 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
CBWD1-215ENST00000487575 ITSN1Q15811 1721 aa9.39□□□□□ -0.91
CBWD1-215ENST00000487575 FMN2Q9NZ56 1722 aa9.39□□□□□ -0.91
CBWD1-215ENST00000487575 HNRNPUQ00839 825 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD1-215ENST00000487575 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.39□□□□□ -0.91
CBWD1-215ENST00000487575 CLEC11AQ9Y240 323 aa9.39□□□□□ -0.91
CBWD1-215ENST00000487575 ACEP12821 1306 aa9.39□□□□□ -0.91
CBWD1-215ENST00000487575 NALCNQ8IZF0 1738 aa9.39□□□□□ -0.91
CBWD1-215ENST00000487575 FKBP8Q14318 412 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 AKAP12Q02952 1782 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 STRCQ7RTU9 1775 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 NCOA3Q9Y6Q9 1424 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 RBM33Q96EV2 1170 aaKnown RBP9.38□□□□□ -0.91
CBWD1-215ENST00000487575 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
CBWD1-215ENST00000487575 POLR3AO14802 1390 aaPredicted RBP9.38□□□□□ -0.91
CBWD1-215ENST00000487575 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
CBWD1-215ENST00000487575 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
CBWD1-215ENST00000487575 INSRP06213 1382 aa9.37□□□□□ -0.91
CBWD1-215ENST00000487575 USP6P35125 1406 aa9.37□□□□□ -0.91
CBWD1-215ENST00000487575 ANKRD26Q9UPS8 1709 aa9.37□□□□□ -0.91
CBWD1-215ENST00000487575 KIF20BQ96Q89 1820 aa9.37□□□□□ -0.91
CBWD1-215ENST00000487575 TTC21BQ7Z4L5 1316 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 PMFBP1Q8TBY8 1022 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 TMEM94Q12767 1356 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 TTC21AQ8NDW8 1320 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 WDR43Q15061 677 aaKnown RBP eCLIP9.36□□□□□ -0.91
CBWD1-215ENST00000487575 NME9Q86XW9 330 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 CFAP53Q96M91 514 aa9.36□□□□□ -0.91
CBWD1-215ENST00000487575 MTHFSP49914 203 aa9.35□□□□□ -0.91
CBWD1-215ENST00000487575 COG3Q96JB2 828 aa9.35□□□□□ -0.91
CBWD1-215ENST00000487575 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
CBWD1-215ENST00000487575 DCCP43146 1447 aa9.35□□□□□ -0.91
CBWD1-215ENST00000487575 SSH2Q76I76 1423 aa9.35□□□□□ -0.91
CBWD1-215ENST00000487575 STRCP1A6NGW2 1772 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 RGPD8O14715 1765 aaPredicted RBP9.34□□□□□ -0.91
CBWD1-215ENST00000487575 SPDYE4A6NLX3 237 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 ATF3P18847 181 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 ZBED9Q6R2W3 1325 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 ESCO1Q5FWF5 840 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 NRKQ7Z2Y5 1582 aa9.34□□□□□ -0.91
CBWD1-215ENST00000487575 ADAMTS8Q9UP79 889 aa9.33□□□□□ -0.92
CBWD1-215ENST00000487575 CADPS2Q86UW7 1296 aa9.32□□□□□ -0.92
CBWD1-215ENST00000487575 BLMP54132 1417 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-215ENST00000487575 MSH6P52701 1360 aa9.32□□□□□ -0.92
CBWD1-215ENST00000487575 AATKQ6ZMQ8 1374 aa9.32□□□□□ -0.92
CBWD1-215ENST00000487575 ZNF335Q9H4Z2 1342 aaPredicted RBP9.32□□□□□ -0.92
CBWD1-215ENST00000487575 ZRANB1Q9UGI0 708 aa9.32□□□□□ -0.92
CBWD1-215ENST00000487575 C1orf167Q5SNV9 1468 aa9.31□□□□□ -0.92
CBWD1-215ENST00000487575 PSME1Q06323 249 aa9.31□□□□□ -0.92
CBWD1-215ENST00000487575 USP31Q70CQ4 1352 aa9.31□□□□□ -0.92
CBWD1-215ENST00000487575 LRRC7Q96NW7 1537 aa9.31□□□□□ -0.92
CBWD1-215ENST00000487575 OVOS2A0A0J9YW53 1432 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 OVOS2Q6IE36 1432 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 PRKAR2AP13861 404 aaKnown RBP9.3□□□□□ -0.92
CBWD1-215ENST00000487575 ORAI2Q96SN7 254 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 POLKQ9UBT6 870 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 NUDCQ9Y266 331 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 PNPLA6Q8IY17 1366 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 MST1RQ04912 1400 aa9.3□□□□□ -0.92
CBWD1-215ENST00000487575 SMG6Q86US8 1419 aaKnown RBP9.29□□□□□ -0.92
CBWD1-215ENST00000487575 PAK3O75914 559 aaPredicted RBP9.29□□□□□ -0.92
CBWD1-215ENST00000487575 KIF1AQ12756 1690 aa9.29□□□□□ -0.92
CBWD1-215ENST00000487575 FOXO3O43524 673 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 DIAPH1O60610 1272 aaKnown RBP9.28□□□□□ -0.92
CBWD1-215ENST00000487575 NLRP6P59044 892 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 ABTB2Q8N961 1025 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 SHPRHQ149N8 1683 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 COL3A1P02461 1466 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-215ENST00000487575 CDK12Q9NYV4 1490 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-215ENST00000487575 PPM1GO15355 546 aaPredicted RBP9.28□□□□□ -0.92
CBWD1-215ENST00000487575 PRR29P0C7W0 189 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 FBLN1P23142 703 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 EMILIN1Q9Y6C2 1016 aa9.28□□□□□ -0.92
CBWD1-215ENST00000487575 XIRP1Q702N8 1843 aaKnown RBP9.27□□□□□ -0.92
CBWD1-215ENST00000487575 PIK3C2AO00443 1686 aa9.27□□□□□ -0.93
CBWD1-215ENST00000487575 MAP2P11137 1827 aaKnown RBP9.27□□□□□ -0.93
CBWD1-215ENST00000487575 U2AF1L5P0DN76 240 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms