RNA–Protein interactions for RNA: ENST00000487558.1

CUL3-211, Transcript of cullin 3, humanhuman

TSL 2

Gene CUL3, Length 1,093 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-211ENST00000487558 TRIM47Q96LD4 638 aa11.04□□□□□ -0.64
CUL3-211ENST00000487558 SH3BP2P78314 561 aa11.03□□□□□ -0.64
CUL3-211ENST00000487558 PTPRNQ16849 979 aa11.03□□□□□ -0.64
CUL3-211ENST00000487558 EVA1BQ9NVM1 165 aa11.03□□□□□ -0.64
CUL3-211ENST00000487558 WFS1O76024 890 aa11.02□□□□□ -0.65
CUL3-211ENST00000487558 NFX1Q12986 1120 aaKnown RBP11.02□□□□□ -0.65
CUL3-211ENST00000487558 EHBP1Q8NDI1 1231 aa11.02□□□□□ -0.65
CUL3-211ENST00000487558 SENP2Q9HC62 589 aa11.02□□□□□ -0.65
CUL3-211ENST00000487558 POLR3EQ9NVU0 708 aa11.02□□□□□ -0.65
CUL3-211ENST00000487558 PRR7Q8TB68 274 aa11.01□□□□□ -0.65
CUL3-211ENST00000487558 SPDYE5A6NIY4 337 aa11□□□□□ -0.65
CUL3-211ENST00000487558 GJA5P36382 358 aa11□□□□□ -0.65
CUL3-211ENST00000487558 MYSM1Q5VVJ2 828 aa11□□□□□ -0.65
CUL3-211ENST00000487558 DESI1Q6ICB0 168 aa11□□□□□ -0.65
CUL3-211ENST00000487558 PROCA1Q8NCQ7 364 aaPredicted RBP11□□□□□ -0.65
CUL3-211ENST00000487558 KCNH2Q12809 1159 aa10.99□□□□□ -0.65
CUL3-211ENST00000487558 MTMR2Q13614 643 aa10.99□□□□□ -0.65
CUL3-211ENST00000487558 TBC1D2Q9BYX2 928 aa10.99□□□□□ -0.65
CUL3-211ENST00000487558 UNC93B1Q9H1C4 597 aa10.99□□□□□ -0.65
CUL3-211ENST00000487558 CLK2P49760 499 aaKnown RBP10.98□□□□□ -0.65
CUL3-211ENST00000487558 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
CUL3-211ENST00000487558 KIFC2Q96AC6 838 aa10.97□□□□□ -0.65
CUL3-211ENST00000487558 RSBN1LQ6PCB5 846 aaPredicted RBP10.96□□□□□ -0.65
CUL3-211ENST00000487558 BAP1Q92560 729 aa10.96□□□□□ -0.65
CUL3-211ENST00000487558 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.96□□□□□ -0.65
CUL3-211ENST00000487558 A6NJR5 290 aa10.95□□□□□ -0.66
CUL3-211ENST00000487558 TERTO14746 1132 aaKnown RBP10.95□□□□□ -0.66
CUL3-211ENST00000487558 LCE2CQ5TA81 110 aa10.95□□□□□ -0.66
CUL3-211ENST00000487558 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
CUL3-211ENST00000487558 SPTLC1O15269 473 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 WIPF1O43516 503 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 MCM6Q14566 821 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 LINC01559Q495D7 138 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 ZNF511Q8NB15 262 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 WASF2Q9Y6W5 498 aa10.94□□□□□ -0.66
CUL3-211ENST00000487558 LYPD8Q6UX82 237 aa10.93□□□□□ -0.66
CUL3-211ENST00000487558 MPNDQ8N594 471 aa10.93□□□□□ -0.66
CUL3-211ENST00000487558 CAPN5O15484 640 aaPredicted RBP10.92□□□□□ -0.66
CUL3-211ENST00000487558 TRIM46Q7Z4K8 759 aa10.92□□□□□ -0.66
CUL3-211ENST00000487558 RIC3Q7Z5B4 369 aa10.92□□□□□ -0.66
CUL3-211ENST00000487558 CFAP99D6REC4 459 aa10.91□□□□□ -0.66
CUL3-211ENST00000487558 VARSP26640 1264 aaKnown RBP10.91□□□□□ -0.66
CUL3-211ENST00000487558 BANK1Q8NDB2 785 aa10.9□□□□□ -0.66
CUL3-211ENST00000487558 CLUAP1Q96AJ1 413 aa10.9□□□□□ -0.66
CUL3-211ENST00000487558 TLL2Q9Y6L7 1015 aa10.9□□□□□ -0.66
CUL3-211ENST00000487558 APBB1O00213 710 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 RAD21O60216 631 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 BMP1P13497 986 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 HRCP23327 699 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 TUSC1Q2TAM9 212 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 TMEM259Q4ZIN3 620 aa10.89□□□□□ -0.67
CUL3-211ENST00000487558 TRAK2O60296 914 aa10.88□□□□□ -0.67
CUL3-211ENST00000487558 RFC5P40937 340 aa10.88□□□□□ -0.67
CUL3-211ENST00000487558 PRPF38BQ5VTL8 546 aaKnown RBP10.88□□□□□ -0.67
CUL3-211ENST00000487558 ZBTB3Q9H5J0 574 aa10.88□□□□□ -0.67
CUL3-211ENST00000487558 F12P00748 615 aaPredicted RBP10.87□□□□□ -0.67
CUL3-211ENST00000487558 PPP2R2DQ66LE6 453 aa10.87□□□□□ -0.67
CUL3-211ENST00000487558 LIMD1Q9UGP4 676 aa10.87□□□□□ -0.67
CUL3-211ENST00000487558 CTHP32929 405 aa10.86□□□□□ -0.67
CUL3-211ENST00000487558 ARID3CA6NKF2 412 aa10.85□□□□□ -0.67
CUL3-211ENST00000487558 CABLES1Q8TDN4 633 aa10.85□□□□□ -0.67
CUL3-211ENST00000487558 ARID3AQ99856 593 aa10.85□□□□□ -0.67
CUL3-211ENST00000487558 NNTQ13423 1086 aa10.84□□□□□ -0.67
CUL3-211ENST00000487558 C1orf115Q9H7X2 142 aa10.84□□□□□ -0.67
CUL3-211ENST00000487558 MAP10Q9P2G4 905 aa10.84□□□□□ -0.67
CUL3-211ENST00000487558 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
CUL3-211ENST00000487558 PROSER2Q86WR7 435 aaPredicted RBP10.83□□□□□ -0.68
CUL3-211ENST00000487558 FOXJ1Q92949 421 aa10.83□□□□□ -0.68
CUL3-211ENST00000487558 KLF16Q9BXK1 252 aaPredicted RBP10.83□□□□□ -0.68
CUL3-211ENST00000487558 NXF1Q9UBU9 619 aaKnown RBP10.83□□□□□ -0.68
CUL3-211ENST00000487558 STK17AQ9UEE5 414 aa10.83□□□□□ -0.68
CUL3-211ENST00000487558 FAM174AQ8TBP5 190 aa10.82□□□□□ -0.68
CUL3-211ENST00000487558 CDK15Q96Q40 435 aa10.82□□□□□ -0.68
CUL3-211ENST00000487558 PER1O15534 1290 aaPredicted RBP10.81□□□□□ -0.68
CUL3-211ENST00000487558 CSPP1Q1MSJ5 1256 aa10.81□□□□□ -0.68
CUL3-211ENST00000487558 ZFP42Q96MM3 310 aa10.81□□□□□ -0.68
CUL3-211ENST00000487558 ADH1CP00326 375 aa10.8□□□□□ -0.68
CUL3-211ENST00000487558 TIMP2P16035 220 aa10.8□□□□□ -0.68
CUL3-211ENST00000487558 NPAS3Q8IXF0 933 aa10.8□□□□□ -0.68
CUL3-211ENST00000487558 SNRKQ9NRH2 765 aa10.8□□□□□ -0.68
CUL3-211ENST00000487558 QPCTQ16769 361 aa10.79□□□□□ -0.68
CUL3-211ENST00000487558 SLC16A10Q8TF71 515 aa10.79□□□□□ -0.68
CUL3-211ENST00000487558 NUTM2BA6NNL0 878 aaPredicted RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 NUTM2EB1AL46 878 aaPredicted RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 LILRB3O75022 631 aa10.78□□□□□ -0.68
CUL3-211ENST00000487558 WDR4P57081 412 aaKnown RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 C4orf48Q5BLP8 95 aa10.78□□□□□ -0.68
CUL3-211ENST00000487558 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 FBXO31Q5XUX0 539 aaPredicted RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 NUTM2AQ8IVF1 878 aaPredicted RBP10.78□□□□□ -0.68
CUL3-211ENST00000487558 POM121Q96HA1 1249 aa10.78□□□□□ -0.68
CUL3-211ENST00000487558 PRM3Q9NNZ6 103 aa10.78□□□□□ -0.68
CUL3-211ENST00000487558 FNBP4Q8N3X1 1017 aaPredicted RBP10.77□□□□□ -0.69
CUL3-211ENST00000487558 COG6Q9Y2V7 657 aa10.77□□□□□ -0.69
CUL3-211ENST00000487558 H3BM21 787 aa10.76□□□□□ -0.69
CUL3-211ENST00000487558 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
CUL3-211ENST00000487558 GRM5P41594 1212 aa10.75□□□□□ -0.69
CUL3-211ENST00000487558 WWC1Q8IX03 1113 aa10.75□□□□□ -0.69
CUL3-211ENST00000487558 SOCS7O14512 581 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms