RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-215ENST00000487332 PLCH1Q4KWH8 1693 aa14.61□□□□□ -0.07
RNF220-215ENST00000487332 ACEP12821 1306 aa14.61□□□□□ -0.07
RNF220-215ENST00000487332 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
RNF220-215ENST00000487332 NRKQ7Z2Y5 1582 aa14.6□□□□□ -0.07
RNF220-215ENST00000487332 USP6P35125 1406 aa14.59□□□□□ -0.07
RNF220-215ENST00000487332 RXRBP28702 533 aa14.59□□□□□ -0.07
RNF220-215ENST00000487332 PCGF6Q9BYE7 350 aa14.59□□□□□ -0.07
RNF220-215ENST00000487332 COL14A1Q05707 1796 aaKnown RBP14.59□□□□□ -0.07
RNF220-215ENST00000487332 SSH2Q76I76 1423 aa14.58□□□□□ -0.07
RNF220-215ENST00000487332 AKAP12Q02952 1782 aa14.58□□□□□ -0.08
RNF220-215ENST00000487332 SLC24A1O60721 1099 aa14.58□□□□□ -0.08
RNF220-215ENST00000487332 RBM6P78332 1123 aaKnown RBP14.58□□□□□ -0.08
RNF220-215ENST00000487332 PUS7Q96PZ0 661 aaKnown RBP14.58□□□□□ -0.08
RNF220-215ENST00000487332 USP21Q9UK80 565 aa14.58□□□□□ -0.08
RNF220-215ENST00000487332 TRPC5Q9UL62 973 aaPredicted RBP14.58□□□□□ -0.08
RNF220-215ENST00000487332 NRAPQ86VF7 1730 aa14.58□□□□□ -0.08
RNF220-215ENST00000487332 RGS12O14924 1447 aa14.58□□□□□ -0.08
RNF220-215ENST00000487332 CABP2Q9NPB3 220 aa14.57□□□□□ -0.08
RNF220-215ENST00000487332 USP19O94966 1318 aa14.56□□□□□ -0.08
RNF220-215ENST00000487332 CPSF1Q10570 1443 aaKnown RBP14.56□□□□□ -0.08
RNF220-215ENST00000487332 MON2Q7Z3U7 1717 aa14.55□□□□□ -0.08
RNF220-215ENST00000487332 HAP1P54257 671 aaPredicted RBP14.55□□□□□ -0.08
RNF220-215ENST00000487332 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
RNF220-215ENST00000487332 NINLQ9Y2I6 1382 aa14.55□□□□□ -0.08
RNF220-215ENST00000487332 SLIT3O75094 1523 aa14.55□□□□□ -0.08
RNF220-215ENST00000487332 USP54Q70EL1 1684 aa14.55□□□□□ -0.08
RNF220-215ENST00000487332 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
RNF220-215ENST00000487332 UNC5CLQ8IV45 518 aa14.54□□□□□ -0.08
RNF220-215ENST00000487332 PIK3C2AO00443 1686 aa14.54□□□□□ -0.08
RNF220-215ENST00000487332 GLI3P10071 1580 aa14.53□□□□□ -0.08
RNF220-215ENST00000487332 CPDO75976 1380 aa14.53□□□□□ -0.08
RNF220-215ENST00000487332 USP47Q96K76 1375 aa14.53□□□□□ -0.08
RNF220-215ENST00000487332 ZNF692Q9BU19 519 aaPredicted RBP14.53□□□□□ -0.08
RNF220-215ENST00000487332 CABP1Q9NZU7 370 aa14.53□□□□□ -0.08
RNF220-215ENST00000487332 CD163L1Q9NR16 1453 aa14.52□□□□□ -0.08
RNF220-215ENST00000487332 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.09
RNF220-215ENST00000487332 CABLES1Q8TDN4 633 aa14.52□□□□□ -0.09
RNF220-215ENST00000487332 TESK2Q96S53 571 aa14.52□□□□□ -0.09
RNF220-215ENST00000487332 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
RNF220-215ENST00000487332 LMO7Q8WWI1 1683 aa14.51□□□□□ -0.09
RNF220-215ENST00000487332 VPS72Q15906 364 aa14.5□□□□□ -0.09
RNF220-215ENST00000487332 ABCC6O95255 1503 aa14.5□□□□□ -0.09
RNF220-215ENST00000487332 NLRP13Q86W25 1043 aa14.49□□□□□ -0.09
RNF220-215ENST00000487332 GJD4Q96KN9 370 aaPredicted RBP14.49□□□□□ -0.09
RNF220-215ENST00000487332 KIAA0232Q92628 1395 aa14.48□□□□□ -0.09
RNF220-215ENST00000487332 ST20-MTHFSA0A0A6YYL1 179 aa14.48□□□□□ -0.09
RNF220-215ENST00000487332 FAM83GA6ND36 823 aa14.48□□□□□ -0.09
RNF220-215ENST00000487332 ABTB2Q8N961 1025 aa14.48□□□□□ -0.09
RNF220-215ENST00000487332 EDC4Q6P2E9 1401 aaKnown RBP14.48□□□□□ -0.09
RNF220-215ENST00000487332 KTN1Q86UP2 1357 aaKnown RBP14.47□□□□□ -0.09
RNF220-215ENST00000487332 TTC21BQ7Z4L5 1316 aa14.47□□□□□ -0.09
RNF220-215ENST00000487332 CCER1Q8TC90 406 aaPredicted RBP14.47□□□□□ -0.09
RNF220-215ENST00000487332 USP31Q70CQ4 1352 aa14.47□□□□□ -0.09
RNF220-215ENST00000487332 PRDM11Q9NQV5 511 aa14.46□□□□□ -0.09
RNF220-215ENST00000487332 NFAT5O94916 1531 aa14.46□□□□□ -0.1
RNF220-215ENST00000487332 THSD7AQ9UPZ6 1657 aa14.45□□□□□ -0.1
RNF220-215ENST00000487332 A0A1W2PP64 1363 aa14.45□□□□□ -0.1
RNF220-215ENST00000487332 ONECUT3O60422 494 aaPredicted RBP14.44□□□□□ -0.1
RNF220-215ENST00000487332 GCP02774 474 aa14.44□□□□□ -0.1
RNF220-215ENST00000487332 TMF1P82094 1093 aa14.44□□□□□ -0.1
RNF220-215ENST00000487332 BTG4Q9NY30 223 aa14.44□□□□□ -0.1
RNF220-215ENST00000487332 ANKRD36BQ8N2N9 1353 aa14.44□□□□□ -0.1
RNF220-215ENST00000487332 CDCA8Q53HL2 280 aa14.43□□□□□ -0.1
RNF220-215ENST00000487332 HDGFL2Q7Z4V5 671 aaPredicted RBP14.43□□□□□ -0.1
RNF220-215ENST00000487332 TERF2IPQ9NYB0 399 aa14.43□□□□□ -0.1
RNF220-215ENST00000487332 AATKQ6ZMQ8 1374 aa14.43□□□□□ -0.1
RNF220-215ENST00000487332 CAMTA1Q9Y6Y1 1673 aa14.42□□□□□ -0.1
RNF220-215ENST00000487332 NUTM2GQ5VZR2 741 aa14.42□□□□□ -0.1
RNF220-215ENST00000487332 KCNH5Q8NCM2 988 aa14.42□□□□□ -0.1
RNF220-215ENST00000487332 COL5A2P05997 1499 aaPredicted RBP14.42□□□□□ -0.1
RNF220-215ENST00000487332 MYOM1P52179 1685 aa14.42□□□□□ -0.1
RNF220-215ENST00000487332 SPATA31A5Q5VU36 1347 aa14.41□□□□□ -0.1
RNF220-215ENST00000487332 SPATA31A7Q8IWB4 1347 aa14.41□□□□□ -0.1
RNF220-215ENST00000487332 OVOS2A0A0J9YW53 1432 aa14.41□□□□□ -0.1
RNF220-215ENST00000487332 OVOS2Q6IE36 1432 aa14.41□□□□□ -0.1
RNF220-215ENST00000487332 NLRP6P59044 892 aa14.41□□□□□ -0.1
RNF220-215ENST00000487332 UPF1Q92900 1129 aaKnown RBP eCLIP14.41□□□□□ -0.1
RNF220-215ENST00000487332 COL18A1P39060 1754 aa14.4□□□□□ -0.1
RNF220-215ENST00000487332 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
RNF220-215ENST00000487332 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
RNF220-215ENST00000487332 TMC1Q8TDI8 760 aa14.39□□□□□ -0.11
RNF220-215ENST00000487332 SLC12A5Q9H2X9 1139 aa14.39□□□□□ -0.11
RNF220-215ENST00000487332 SPATA31A1Q5TZJ5 1347 aa14.39□□□□□ -0.11
RNF220-215ENST00000487332 CHRNA2Q15822 529 aa14.37□□□□□ -0.11
RNF220-215ENST00000487332 CRB1P82279 1406 aa14.37□□□□□ -0.11
RNF220-215ENST00000487332 BRWD3Q6RI45 1802 aa14.36□□□□□ -0.11
RNF220-215ENST00000487332 BARGINQ6ZT62 677 aa14.36□□□□□ -0.11
RNF220-215ENST00000487332 ARHGEF25Q86VW2 580 aa14.36□□□□□ -0.11
RNF220-215ENST00000487332 SEPT12Q8IYM1 358 aa14.36□□□□□ -0.11
RNF220-215ENST00000487332 THRAP3Q9Y2W1 955 aaKnown RBP14.36□□□□□ -0.11
RNF220-215ENST00000487332 CCDC9Q9Y3X0 531 aaKnown RBP14.36□□□□□ -0.11
RNF220-215ENST00000487332 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
RNF220-215ENST00000487332 CCDC125Q86Z20 511 aa14.35□□□□□ -0.11
RNF220-215ENST00000487332 WNK3Q9BYP7 1800 aa14.34□□□□□ -0.11
RNF220-215ENST00000487332 EIF4G2P78344 907 aaKnown RBP eCLIP14.34□□□□□ -0.11
RNF220-215ENST00000487332 BLMP54132 1417 aaPredicted RBP14.33□□□□□ -0.11
RNF220-215ENST00000487332 FAM98CQ17RN3 349 aaKnown RBP14.33□□□□□ -0.12
RNF220-215ENST00000487332 NME9Q86XW9 330 aa14.33□□□□□ -0.12
RNF220-215ENST00000487332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.33□□□□□ -0.12
RNF220-215ENST00000487332 WDR17Q8IZU2 1322 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms