RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
LRRC1-203ENST00000487251 MAP2P11137 1827 aaKnown RBP29.62■■■□□ 2.33
LRRC1-203ENST00000487251 BCAR3O75815 825 aa29.62■■■□□ 2.33
LRRC1-203ENST00000487251 CPSF1Q10570 1443 aaKnown RBP29.61■■■□□ 2.33
LRRC1-203ENST00000487251 DEKP35659 375 aaKnown RBP29.61■■■□□ 2.33
LRRC1-203ENST00000487251 ZRANB1Q9UGI0 708 aa29.61■■■□□ 2.33
LRRC1-203ENST00000487251 PRR36Q9H6K5 1346 aa29.6■■■□□ 2.33
LRRC1-203ENST00000487251 SIRT1Q96EB6 747 aa29.6■■■□□ 2.33
LRRC1-203ENST00000487251 PHF23Q9BUL5 403 aaPredicted RBP29.6■■■□□ 2.33
LRRC1-203ENST00000487251 NME9Q86XW9 330 aa29.59■■■□□ 2.33
LRRC1-203ENST00000487251 PTPRUQ92729 1446 aa29.58■■■□□ 2.33
LRRC1-203ENST00000487251 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
LRRC1-203ENST00000487251 NUTM2FA1L443 756 aa29.58■■■□□ 2.33
LRRC1-203ENST00000487251 PPM1GO15355 546 aaPredicted RBP29.58■■■□□ 2.33
LRRC1-203ENST00000487251 CDC42BPGQ6DT37 1551 aa29.57■■■□□ 2.32
LRRC1-203ENST00000487251 MON2Q7Z3U7 1717 aa29.56■■■□□ 2.32
LRRC1-203ENST00000487251 EID1Q9Y6B2 187 aa29.56■■■□□ 2.32
LRRC1-203ENST00000487251 CCDC61Q9Y6R9 512 aa29.56■■■□□ 2.32
LRRC1-203ENST00000487251 AKAP12Q02952 1782 aa29.55■■■□□ 2.32
LRRC1-203ENST00000487251 EDC4Q6P2E9 1401 aaKnown RBP29.55■■■□□ 2.32
LRRC1-203ENST00000487251 ITSN1Q15811 1721 aa29.55■■■□□ 2.32
LRRC1-203ENST00000487251 PLEKHF1Q96S99 279 aa29.55■■■□□ 2.32
LRRC1-203ENST00000487251 POLKQ9UBT6 870 aa29.54■■■□□ 2.32
LRRC1-203ENST00000487251 SLIT1O75093 1534 aa29.54■■■□□ 2.32
LRRC1-203ENST00000487251 DIAPH1O60610 1272 aaKnown RBP29.53■■■□□ 2.32
LRRC1-203ENST00000487251 ARHGAP23Q9P227 1491 aa29.53■■■□□ 2.32
LRRC1-203ENST00000487251 PNPLA6Q8IY17 1366 aa29.53■■■□□ 2.32
LRRC1-203ENST00000487251 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.51■■■□□ 2.31
LRRC1-203ENST00000487251 CCDC27Q2M243 656 aa29.5■■■□□ 2.31
LRRC1-203ENST00000487251 WDR63Q8IWG1 891 aa29.5■■■□□ 2.31
LRRC1-203ENST00000487251 EMILIN1Q9Y6C2 1016 aa29.5■■■□□ 2.31
LRRC1-203ENST00000487251 PAK3O75914 559 aaPredicted RBP29.48■■■□□ 2.31
LRRC1-203ENST00000487251 AMOTL2Q9Y2J4 779 aa29.48■■■□□ 2.31
LRRC1-203ENST00000487251 NOP58Q9Y2X3 529 aaKnown RBP29.48■■■□□ 2.31
LRRC1-203ENST00000487251 TMPOP42166 694 aaKnown RBP29.47■■■□□ 2.31
LRRC1-203ENST00000487251 SKAP1Q86WV1 359 aa29.47■■■□□ 2.31
LRRC1-203ENST00000487251 THEMISQ8N1K5 641 aaPredicted RBP29.45■■■□□ 2.31
LRRC1-203ENST00000487251 MAPK8IP3Q9UPT6 1336 aa29.45■■■□□ 2.31
LRRC1-203ENST00000487251 TOPAZ1Q8N9V7 1692 aa29.45■■■□□ 2.31
LRRC1-203ENST00000487251 RIMS1Q86UR5 1692 aaKnown RBP29.45■■■□□ 2.3
LRRC1-203ENST00000487251 TRIM35Q9UPQ4 493 aa29.44■■■□□ 2.3
LRRC1-203ENST00000487251 LRRC7Q96NW7 1537 aa29.43■■■□□ 2.3
LRRC1-203ENST00000487251 NBR1Q14596 966 aa29.43■■■□□ 2.3
LRRC1-203ENST00000487251 RRS1Q15050 365 aaKnown RBP29.42■■■□□ 2.3
LRRC1-203ENST00000487251 TSR2Q969E8 191 aaKnown RBP29.41■■■□□ 2.3
LRRC1-203ENST00000487251 COG3Q96JB2 828 aa29.41■■■□□ 2.3
LRRC1-203ENST00000487251 TBX22Q9Y458 520 aa29.41■■■□□ 2.3
LRRC1-203ENST00000487251 ACEP12821 1306 aa29.41■■■□□ 2.3
LRRC1-203ENST00000487251 RGPD8O14715 1765 aaPredicted RBP29.41■■■□□ 2.3
LRRC1-203ENST00000487251 BCL2L13Q9BXK5 485 aa29.4■■■□□ 2.3
LRRC1-203ENST00000487251 HMOX1P09601 288 aa29.39■■■□□ 2.3
LRRC1-203ENST00000487251 RARSP54136 660 aaKnown RBP29.39■■■□□ 2.3
LRRC1-203ENST00000487251 NRKQ7Z2Y5 1582 aa29.39■■■□□ 2.29
LRRC1-203ENST00000487251 RIPK4P57078 832 aa29.38■■■□□ 2.29
LRRC1-203ENST00000487251 FRAT1Q92837 279 aaPredicted RBP29.38■■■□□ 2.29
LRRC1-203ENST00000487251 ZNF692Q9BU19 519 aaPredicted RBP29.38■■■□□ 2.29
LRRC1-203ENST00000487251 CEP170BQ9Y4F5 1589 aaPredicted RBP29.37■■■□□ 2.29
LRRC1-203ENST00000487251 NCBP3Q53F19 620 aaKnown RBP29.37■■■□□ 2.29
LRRC1-203ENST00000487251 PRKAR2BP31323 418 aa29.37■■■□□ 2.29
LRRC1-203ENST00000487251 RSPH6AQ9H0K4 717 aa29.37■■■□□ 2.29
LRRC1-203ENST00000487251 MYH16Q9H6N6 1097 aa29.37■■■□□ 2.29
LRRC1-203ENST00000487251 PANK1Q8TE04 598 aa29.36■■■□□ 2.29
LRRC1-203ENST00000487251 CANXP27824 592 aaKnown RBP29.36■■■□□ 2.29
LRRC1-203ENST00000487251 TNNQ9UQP3 1299 aa29.35■■■□□ 2.29
LRRC1-203ENST00000487251 KDM2BQ8NHM5 1336 aa29.35■■■□□ 2.29
LRRC1-203ENST00000487251 TTC21BQ7Z4L5 1316 aa29.34■■■□□ 2.29
LRRC1-203ENST00000487251 FCHSD2O94868 740 aa29.34■■■□□ 2.29
LRRC1-203ENST00000487251 PMFBP1Q8TBY8 1022 aa29.34■■■□□ 2.29
LRRC1-203ENST00000487251 CDK12Q9NYV4 1490 aaPredicted RBP29.34■■■□□ 2.29
LRRC1-203ENST00000487251 AATKQ6ZMQ8 1374 aa29.33■■■□□ 2.29
LRRC1-203ENST00000487251 IL13P35225 146 aa29.33■■■□□ 2.29
LRRC1-203ENST00000487251 PHACTR3Q96KR7 559 aa29.33■■■□□ 2.29
LRRC1-203ENST00000487251 PTCH1Q13635 1447 aa29.33■■■□□ 2.29
LRRC1-203ENST00000487251 PLEKHG3A1L390 1219 aa29.32■■■□□ 2.28
LRRC1-203ENST00000487251 COG6Q9Y2V7 657 aa29.32■■■□□ 2.28
LRRC1-203ENST00000487251 DIP2AQ14689 1571 aa29.32■■■□□ 2.28
LRRC1-203ENST00000487251 XRN1Q8IZH2 1706 aaKnown RBP29.32■■■□□ 2.28
LRRC1-203ENST00000487251 USP6P35125 1406 aa29.31■■■□□ 2.28
LRRC1-203ENST00000487251 KCNA6P17658 529 aa29.29■■■□□ 2.28
LRRC1-203ENST00000487251 EXOSC9Q06265 439 aaKnown RBP29.29■■■□□ 2.28
LRRC1-203ENST00000487251 PDE3AQ14432 1141 aa29.29■■■□□ 2.28
LRRC1-203ENST00000487251 PNNQ9H307 717 aaKnown RBP29.29■■■□□ 2.28
LRRC1-203ENST00000487251 TCERG1O14776 1098 aaKnown RBP29.28■■■□□ 2.28
LRRC1-203ENST00000487251 SOX12O15370 315 aa29.26■■■□□ 2.27
LRRC1-203ENST00000487251 RLBP1P12271 317 aa29.26■■■□□ 2.27
LRRC1-203ENST00000487251 OVOS2A0A0J9YW53 1432 aa29.25■■■□□ 2.27
LRRC1-203ENST00000487251 OVOS2Q6IE36 1432 aa29.25■■■□□ 2.27
LRRC1-203ENST00000487251 CENPQQ7L2Z9 268 aaPredicted RBP29.25■■■□□ 2.27
LRRC1-203ENST00000487251 DLG5Q8TDM6 1919 aa29.24■■■□□ 2.27
LRRC1-203ENST00000487251 CLUAP1Q96AJ1 413 aa29.24■■■□□ 2.27
LRRC1-203ENST00000487251 THUMPD2Q9BTF0 503 aaKnown RBP29.24■■■□□ 2.27
LRRC1-203ENST00000487251 NALCNQ8IZF0 1738 aa29.22■■■□□ 2.27
LRRC1-203ENST00000487251 PEAK1Q9H792 1746 aa29.22■■■□□ 2.27
LRRC1-203ENST00000487251 NEFMP07197 916 aa29.21■■■□□ 2.27
LRRC1-203ENST00000487251 SSH2Q76I76 1423 aa29.21■■■□□ 2.27
LRRC1-203ENST00000487251 IL16Q14005 1332 aa29.21■■■□□ 2.27
LRRC1-203ENST00000487251 NFE2L2Q16236 605 aa29.21■■■□□ 2.27
LRRC1-203ENST00000487251 ADAMTSL3P82987 1691 aa29.2■■■□□ 2.27
LRRC1-203ENST00000487251 RBM33Q96EV2 1170 aaKnown RBP29.2■■■□□ 2.27
LRRC1-203ENST00000487251 IPO9Q96P70 1041 aaKnown RBP29.2■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms