RNA–Protein interactions for RNA: ENST00000487091.1

CLIP2-206, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best)

Gene CLIP2, Length 989 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-206ENST00000487091 ACEP12821 1306 aa27.37■■□□□ 1.97
CLIP2-206ENST00000487091 SRPK2P78362 688 aaKnown RBP27.36■■□□□ 1.97
CLIP2-206ENST00000487091 NBPF8Q3BBV2 869 aa27.36■■□□□ 1.97
CLIP2-206ENST00000487091 QRICH2Q9H0J4 1663 aa27.36■■□□□ 1.97
CLIP2-206ENST00000487091 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
CLIP2-206ENST00000487091 ATAD2Q6PL18 1390 aa27.35■■□□□ 1.97
CLIP2-206ENST00000487091 PLCH1Q4KWH8 1693 aa27.34■■□□□ 1.97
CLIP2-206ENST00000487091 RALGAPBQ86X10 1494 aa27.34■■□□□ 1.97
CLIP2-206ENST00000487091 VPS72Q15906 364 aa27.34■■□□□ 1.97
CLIP2-206ENST00000487091 GLI3P10071 1580 aa27.32■■□□□ 1.96
CLIP2-206ENST00000487091 CABP2Q9NPB3 220 aa27.32■■□□□ 1.96
CLIP2-206ENST00000487091 CRYBG1Q9Y4K1 1723 aa27.31■■□□□ 1.96
CLIP2-206ENST00000487091 PPIP5K1Q6PFW1 1433 aa27.3■■□□□ 1.96
CLIP2-206ENST00000487091 COL14A1Q05707 1796 aaKnown RBP27.28■■□□□ 1.96
CLIP2-206ENST00000487091 EVC2Q86UK5 1308 aa27.28■■□□□ 1.96
CLIP2-206ENST00000487091 BTG4Q9NY30 223 aa27.27■■□□□ 1.96
CLIP2-206ENST00000487091 ONECUT3O60422 494 aaPredicted RBP27.26■■□□□ 1.95
CLIP2-206ENST00000487091 BRD4O60885 1362 aaPredicted RBP27.25■■□□□ 1.95
CLIP2-206ENST00000487091 TONSLQ96HA7 1378 aa27.25■■□□□ 1.95
CLIP2-206ENST00000487091 CCDC9Q9Y3X0 531 aaKnown RBP27.25■■□□□ 1.95
CLIP2-206ENST00000487091 PRDM11Q9NQV5 511 aa27.24■■□□□ 1.95
CLIP2-206ENST00000487091 NRAPQ86VF7 1730 aa27.24■■□□□ 1.95
CLIP2-206ENST00000487091 ABTB2Q8N961 1025 aa27.23■■□□□ 1.95
CLIP2-206ENST00000487091 CABP1Q9NZU7 370 aa27.23■■□□□ 1.95
CLIP2-206ENST00000487091 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
CLIP2-206ENST00000487091 PHRF1Q9P1Y6 1649 aaKnown RBP27.21■■□□□ 1.95
CLIP2-206ENST00000487091 SEPT12Q8IYM1 358 aa27.21■■□□□ 1.95
CLIP2-206ENST00000487091 CCDC125Q86Z20 511 aa27.2■■□□□ 1.94
CLIP2-206ENST00000487091 KIAA0232Q92628 1395 aa27.2■■□□□ 1.94
CLIP2-206ENST00000487091 CARD11Q9BXL7 1154 aa27.19■■□□□ 1.94
CLIP2-206ENST00000487091 EP400Q96L91 3159 aa27.18■■□□□ 1.94
CLIP2-206ENST00000487091 NLRP13Q86W25 1043 aa27.18■■□□□ 1.94
CLIP2-206ENST00000487091 BRWD3Q6RI45 1802 aa27.18■■□□□ 1.94
CLIP2-206ENST00000487091 USP19O94966 1318 aa27.17■■□□□ 1.94
CLIP2-206ENST00000487091 USP6P35125 1406 aa27.17■■□□□ 1.94
CLIP2-206ENST00000487091 ZC3H6P61129 1189 aaKnown RBP27.17■■□□□ 1.94
CLIP2-206ENST00000487091 SBNO2Q9Y2G9 1366 aa27.17■■□□□ 1.94
CLIP2-206ENST00000487091 SPATA31A5Q5VU36 1347 aa27.16■■□□□ 1.94
CLIP2-206ENST00000487091 SPATA31A7Q8IWB4 1347 aa27.16■■□□□ 1.94
CLIP2-206ENST00000487091 CHRNA2Q15822 529 aa27.14■■□□□ 1.94
CLIP2-206ENST00000487091 ZNF692Q9BU19 519 aaPredicted RBP27.14■■□□□ 1.94
CLIP2-206ENST00000487091 CPDO75976 1380 aa27.13■■□□□ 1.93
CLIP2-206ENST00000487091 SSH2Q76I76 1423 aa27.13■■□□□ 1.93
CLIP2-206ENST00000487091 GCP02774 474 aa27.12■■□□□ 1.93
CLIP2-206ENST00000487091 FAM98CQ17RN3 349 aaKnown RBP27.12■■□□□ 1.93
CLIP2-206ENST00000487091 KRT27Q7Z3Y8 459 aa27.12■■□□□ 1.93
CLIP2-206ENST00000487091 NRKQ7Z2Y5 1582 aa27.12■■□□□ 1.93
CLIP2-206ENST00000487091 NLRP6P59044 892 aa27.09■■□□□ 1.93
CLIP2-206ENST00000487091 A0A0G2JS52 829 aa27.08■■□□□ 1.93
CLIP2-206ENST00000487091 MYT1Q01538 1121 aa27.08■■□□□ 1.93
CLIP2-206ENST00000487091 BLMP54132 1417 aaPredicted RBP27.07■■□□□ 1.92
CLIP2-206ENST00000487091 STRN4Q9NRL3 753 aa27.07■■□□□ 1.92
CLIP2-206ENST00000487091 SPATA31A1Q5TZJ5 1347 aa27.07■■□□□ 1.92
CLIP2-206ENST00000487091 EVA1CP58658 441 aa27.06■■□□□ 1.92
CLIP2-206ENST00000487091 AKAP12Q02952 1782 aa27.06■■□□□ 1.92
CLIP2-206ENST00000487091 TTC21BQ7Z4L5 1316 aa27.05■■□□□ 1.92
CLIP2-206ENST00000487091 CPSF1Q10570 1443 aaKnown RBP27.05■■□□□ 1.92
CLIP2-206ENST00000487091 CAMTA1Q9Y6Y1 1673 aa27.05■■□□□ 1.92
CLIP2-206ENST00000487091 LMO7Q8WWI1 1683 aa27.04■■□□□ 1.92
CLIP2-206ENST00000487091 SLIT3O75094 1523 aa27.03■■□□□ 1.92
CLIP2-206ENST00000487091 TTC21AQ8NDW8 1320 aa27.03■■□□□ 1.92
CLIP2-206ENST00000487091 PIK3C2AO00443 1686 aa27.02■■□□□ 1.92
CLIP2-206ENST00000487091 PUS7Q96PZ0 661 aaKnown RBP27.02■■□□□ 1.92
CLIP2-206ENST00000487091 THSD7AQ9UPZ6 1657 aa27.01■■□□□ 1.92
CLIP2-206ENST00000487091 KTN1Q86UP2 1357 aaKnown RBP27■■□□□ 1.91
CLIP2-206ENST00000487091 SF3B2Q13435 895 aaKnown RBP27■■□□□ 1.91
CLIP2-206ENST00000487091 AATKQ6ZMQ8 1374 aa26.98■■□□□ 1.91
CLIP2-206ENST00000487091 SLC24A1O60721 1099 aa26.98■■□□□ 1.91
CLIP2-206ENST00000487091 LARP1Q6PKG0 1096 aaKnown RBP26.98■■□□□ 1.91
CLIP2-206ENST00000487091 BARGINQ6ZT62 677 aa26.98■■□□□ 1.91
CLIP2-206ENST00000487091 KCNH5Q8NCM2 988 aa26.97■■□□□ 1.91
CLIP2-206ENST00000487091 USP35Q9P2H5 1018 aa26.96■■□□□ 1.91
CLIP2-206ENST00000487091 MON2Q7Z3U7 1717 aa26.96■■□□□ 1.91
CLIP2-206ENST00000487091 COL5A2P05997 1499 aaPredicted RBP26.95■■□□□ 1.91
CLIP2-206ENST00000487091 ST20-MTHFSA0A0A6YYL1 179 aa26.95■■□□□ 1.9
CLIP2-206ENST00000487091 TCP11L2Q8N4U5 519 aa26.95■■□□□ 1.9
CLIP2-206ENST00000487091 TESK2Q96S53 571 aa26.95■■□□□ 1.9
CLIP2-206ENST00000487091 THRAP3Q9Y2W1 955 aaKnown RBP26.95■■□□□ 1.9
CLIP2-206ENST00000487091 TMC1Q8TDI8 760 aa26.94■■□□□ 1.9
CLIP2-206ENST00000487091 ZRANB1Q9UGI0 708 aa26.94■■□□□ 1.9
CLIP2-206ENST00000487091 CD163L1Q9NR16 1453 aa26.93■■□□□ 1.9
CLIP2-206ENST00000487091 HDGFL2Q7Z4V5 671 aaPredicted RBP26.93■■□□□ 1.9
CLIP2-206ENST00000487091 DEFB132Q7Z7B7 95 aa26.93■■□□□ 1.9
CLIP2-206ENST00000487091 SLC12A5Q9H2X9 1139 aa26.93■■□□□ 1.9
CLIP2-206ENST00000487091 CLSPNQ9HAW4 1339 aa26.92■■□□□ 1.9
CLIP2-206ENST00000487091 ZBTB7CA1YPR0 619 aa26.92■■□□□ 1.9
CLIP2-206ENST00000487091 ARHGEF25Q86VW2 580 aa26.92■■□□□ 1.9
CLIP2-206ENST00000487091 TIMELESSQ9UNS1 1208 aa26.92■■□□□ 1.9
CLIP2-206ENST00000487091 COL18A1P39060 1754 aa26.91■■□□□ 1.9
CLIP2-206ENST00000487091 USP31Q70CQ4 1352 aa26.9■■□□□ 1.9
CLIP2-206ENST00000487091 FAM182BQ5T319 152 aa26.9■■□□□ 1.9
CLIP2-206ENST00000487091 TERF2IPQ9NYB0 399 aa26.9■■□□□ 1.9
CLIP2-206ENST00000487091 CRB1P82279 1406 aa26.9■■□□□ 1.9
CLIP2-206ENST00000487091 BAG6P46379 1132 aa26.88■■□□□ 1.89
CLIP2-206ENST00000487091 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.88■■□□□ 1.89
CLIP2-206ENST00000487091 NINLQ9Y2I6 1382 aa26.87■■□□□ 1.89
CLIP2-206ENST00000487091 FAM196AQ6ZSG2 479 aa26.87■■□□□ 1.89
CLIP2-206ENST00000487091 AXIN2Q9Y2T1 843 aa26.87■■□□□ 1.89
CLIP2-206ENST00000487091 EDC4Q6P2E9 1401 aaKnown RBP26.87■■□□□ 1.89
CLIP2-206ENST00000487091 PDE3BQ13370 1112 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms