RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 KRTAP4-6Q9BYQ5 205 aa8.92□□□□□ -0.98
SNRNP27-204ENST00000487029 VARSP26640 1264 aaKnown RBP8.91□□□□□ -0.98
SNRNP27-204ENST00000487029 MPNDQ8N594 471 aa8.91□□□□□ -0.98
SNRNP27-204ENST00000487029 KRI1Q8N9T8 703 aaKnown RBP8.91□□□□□ -0.98
SNRNP27-204ENST00000487029 WDR4P57081 412 aaKnown RBP8.9□□□□□ -0.98
SNRNP27-204ENST00000487029 PLEKHG3A1L390 1219 aa8.88□□□□□ -0.99
SNRNP27-204ENST00000487029 FOXJ1Q92949 421 aa8.88□□□□□ -0.99
SNRNP27-204ENST00000487029 ADH1CP00326 375 aa8.87□□□□□ -0.99
SNRNP27-204ENST00000487029 MTMR2Q13614 643 aa8.87□□□□□ -0.99
SNRNP27-204ENST00000487029 DESI1Q6ICB0 168 aa8.87□□□□□ -0.99
SNRNP27-204ENST00000487029 ZFAND3Q9H8U3 227 aa8.87□□□□□ -0.99
SNRNP27-204ENST00000487029 VSIG8P0DPA2 414 aa8.86□□□□□ -0.99
SNRNP27-204ENST00000487029 SCARF1Q14162 830 aa8.86□□□□□ -0.99
SNRNP27-204ENST00000487029 TULP1O00294 542 aaPredicted RBP8.85□□□□□ -0.99
SNRNP27-204ENST00000487029 NR3C2P08235 984 aa8.85□□□□□ -0.99
SNRNP27-204ENST00000487029 ITPKCQ96DU7 683 aa8.85□□□□□ -0.99
SNRNP27-204ENST00000487029 PCDHB15Q9Y5E8 787 aa8.85□□□□□ -0.99
SNRNP27-204ENST00000487029 CFAP99D6REC4 459 aa8.84□□□□□ -0.99
SNRNP27-204ENST00000487029 CTHP32929 405 aa8.84□□□□□ -0.99
SNRNP27-204ENST00000487029 LYPD8Q6UX82 237 aa8.84□□□□□ -0.99
SNRNP27-204ENST00000487029 CDK15Q96Q40 435 aa8.84□□□□□ -0.99
SNRNP27-204ENST00000487029 MAP10Q9P2G4 905 aa8.84□□□□□ -0.99
SNRNP27-204ENST00000487029 ZIC2O95409 532 aaPredicted RBP8.83□□□□□ -1
SNRNP27-204ENST00000487029 ARID5BQ14865 1188 aa8.83□□□□□ -1
SNRNP27-204ENST00000487029 C4orf48Q5BLP8 95 aa8.83□□□□□ -1
SNRNP27-204ENST00000487029 C6orf118Q5T5N4 469 aa8.83□□□□□ -1
SNRNP27-204ENST00000487029 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.83□□□□□ -1
SNRNP27-204ENST00000487029 FAM174AQ8TBP5 190 aa8.83□□□□□ -1
SNRNP27-204ENST00000487029 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
SNRNP27-204ENST00000487029 GRM5P41594 1212 aa8.82□□□□□ -1
SNRNP27-204ENST00000487029 GSK3AP49840 483 aa8.82□□□□□ -1
SNRNP27-204ENST00000487029 TTLL12Q14166 644 aaPredicted RBP8.82□□□□□ -1
SNRNP27-204ENST00000487029 GIGYF2Q6Y7W6 1299 aaKnown RBP8.82□□□□□ -1
SNRNP27-204ENST00000487029 F12P00748 615 aaPredicted RBP8.81□□□□□ -1
SNRNP27-204ENST00000487029 BEGAINQ9BUH8 593 aa8.81□□□□□ -1
SNRNP27-204ENST00000487029 PPFIA3O75145 1194 aa8.8□□□□□ -1
SNRNP27-204ENST00000487029 RSBN1LQ6PCB5 846 aaPredicted RBP8.8□□□□□ -1
SNRNP27-204ENST00000487029 TBC1D2Q9BYX2 928 aa8.8□□□□□ -1
SNRNP27-204ENST00000487029 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
SNRNP27-204ENST00000487029 MAN1A2O60476 641 aa8.79□□□□□ -1
SNRNP27-204ENST00000487029 AMHR2Q16671 573 aa8.79□□□□□ -1
SNRNP27-204ENST00000487029 HRCP23327 699 aa8.78□□□□□ -1
SNRNP27-204ENST00000487029 BARGINQ6ZT62 677 aa8.78□□□□□ -1
SNRNP27-204ENST00000487029 NR5A1Q13285 461 aa8.77□□□□□ -1.01
SNRNP27-204ENST00000487029 SUZ12Q15022 739 aaKnown RBP8.77□□□□□ -1.01
SNRNP27-204ENST00000487029 CABLES1Q8TDN4 633 aa8.77□□□□□ -1.01
SNRNP27-204ENST00000487029 DNMT3LQ9UJW3 386 aa8.77□□□□□ -1.01
SNRNP27-204ENST00000487029 GJA5P36382 358 aa8.76□□□□□ -1.01
SNRNP27-204ENST00000487029 KRT76Q01546 638 aa8.76□□□□□ -1.01
SNRNP27-204ENST00000487029 GPR161Q8N6U8 529 aaKnown RBP8.76□□□□□ -1.01
SNRNP27-204ENST00000487029 SPTLC1O15269 473 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 ZMYND10O75800 440 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 BMP2P12643 396 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 LINC00528Q8N1L1 170 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 KCTD17Q8N5Z5 321 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 MEIOBQ8N635 442 aa8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 SOS2Q07890 1332 aaPredicted RBP8.75□□□□□ -1.01
SNRNP27-204ENST00000487029 KCNMA1Q12791 1236 aa8.74□□□□□ -1.01
SNRNP27-204ENST00000487029 AGERQ15109 404 aa8.74□□□□□ -1.01
SNRNP27-204ENST00000487029 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
SNRNP27-204ENST00000487029 CSPP1Q1MSJ5 1256 aa8.72□□□□□ -1.01
SNRNP27-204ENST00000487029 RIC3Q7Z5B4 369 aa8.72□□□□□ -1.01
SNRNP27-204ENST00000487029 PARP9Q8IXQ6 854 aa8.72□□□□□ -1.01
SNRNP27-204ENST00000487029 VSIG10Q8N0Z9 540 aa8.72□□□□□ -1.01
SNRNP27-204ENST00000487029 SH3RF1Q7Z6J0 888 aa8.71□□□□□ -1.02
SNRNP27-204ENST00000487029 BPHLQ86WA6 291 aaPredicted RBP8.71□□□□□ -1.02
SNRNP27-204ENST00000487029 C1QTNF2Q9BXJ5 285 aa8.71□□□□□ -1.02
SNRNP27-204ENST00000487029 ZC3H15Q8WU90 426 aaKnown RBP8.7□□□□□ -1.02
SNRNP27-204ENST00000487029 CNTNAP3BQ96NU0 1288 aa8.7□□□□□ -1.02
SNRNP27-204ENST00000487029 CNTNAP3Q9BZ76 1288 aa8.7□□□□□ -1.02
SNRNP27-204ENST00000487029 UPP2O95045 317 aa8.69□□□□□ -1.02
SNRNP27-204ENST00000487029 FSHRP23945 695 aa8.69□□□□□ -1.02
SNRNP27-204ENST00000487029 QPCTQ16769 361 aa8.69□□□□□ -1.02
SNRNP27-204ENST00000487029 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
SNRNP27-204ENST00000487029 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
SNRNP27-204ENST00000487029 DIXDC1Q155Q3 683 aa8.68□□□□□ -1.02
SNRNP27-204ENST00000487029 TSC1Q92574 1164 aa8.68□□□□□ -1.02
SNRNP27-204ENST00000487029 RASSF7Q02833 373 aa8.67□□□□□ -1.02
SNRNP27-204ENST00000487029 PTSQ03393 145 aa8.67□□□□□ -1.02
SNRNP27-204ENST00000487029 FIGNL2A6NMB9 653 aa8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 TRIM66O15016 1216 aa8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 RNFT1Q5M7Z0 435 aa8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 VASH1Q7L8A9 365 aaPredicted RBP8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 SH3BP5LQ7L8J4 393 aa8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 TSEN34Q9BSV6 310 aaKnown RBP8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 ADAMTS8Q9UP79 889 aa8.66□□□□□ -1.02
SNRNP27-204ENST00000487029 TTLL8A6PVC2 850 aa8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 GDF11O95390 407 aa8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 CBLBQ13191 982 aa8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 TMEM151AQ8N4L1 468 aa8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 COL25A1Q9BXS0 654 aaPredicted RBP8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 MAP4K5Q9Y4K4 846 aa8.65□□□□□ -1.02
SNRNP27-204ENST00000487029 MAGEB6P1A0A0J9YX57 407 aa8.64□□□□□ -1.03
SNRNP27-204ENST00000487029 LILRB3O75022 631 aa8.64□□□□□ -1.03
SNRNP27-204ENST00000487029 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.64□□□□□ -1.03
SNRNP27-204ENST00000487029 TRMT44Q8IYL2 757 aaKnown RBP8.64□□□□□ -1.03
SNRNP27-204ENST00000487029 WHAMMQ8TF30 809 aa8.64□□□□□ -1.03
SNRNP27-204ENST00000487029 RTL5Q5HYW3 569 aaPredicted RBP8.63□□□□□ -1.03
SNRNP27-204ENST00000487029 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
SNRNP27-204ENST00000487029 ZNF385CQ66K41 422 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms