RNA–Protein interactions for RNA: ENST00000486878.2

SCN2A-206, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-206ENST00000486878 FOXC1Q12948 553 aa13.48□□□□□ -0.25
SCN2A-206ENST00000486878 SKOR1P84550 965 aa13.47□□□□□ -0.25
SCN2A-206ENST00000486878 USP17L8P0C7I0 530 aa13.46□□□□□ -0.25
SCN2A-206ENST00000486878 SH3BP2P78314 561 aa13.46□□□□□ -0.25
SCN2A-206ENST00000486878 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
SCN2A-206ENST00000486878 ZNF511Q8NB15 262 aa13.46□□□□□ -0.25
SCN2A-206ENST00000486878 BANK1Q8NDB2 785 aa13.46□□□□□ -0.25
SCN2A-206ENST00000486878 BAP1Q92560 729 aa13.46□□□□□ -0.25
SCN2A-206ENST00000486878 TNFRSF10AO00220 468 aa13.45□□□□□ -0.26
SCN2A-206ENST00000486878 LRRN4Q8WUT4 740 aa13.45□□□□□ -0.26
SCN2A-206ENST00000486878 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
SCN2A-206ENST00000486878 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
SCN2A-206ENST00000486878 SOCS7O14512 581 aa13.42□□□□□ -0.26
SCN2A-206ENST00000486878 CYP4X1Q8N118 509 aa13.42□□□□□ -0.26
SCN2A-206ENST00000486878 PNMA1Q8ND90 353 aa13.42□□□□□ -0.26
SCN2A-206ENST00000486878 MRGPRX2Q96LB1 330 aa13.42□□□□□ -0.26
SCN2A-206ENST00000486878 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
SCN2A-206ENST00000486878 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
SCN2A-206ENST00000486878 LINC01559Q495D7 138 aa13.41□□□□□ -0.26
SCN2A-206ENST00000486878 VARSP26640 1264 aaKnown RBP13.4□□□□□ -0.26
SCN2A-206ENST00000486878 EHBP1Q8NDI1 1231 aa13.4□□□□□ -0.26
SCN2A-206ENST00000486878 SNIP1Q8TAD8 396 aaKnown RBP13.4□□□□□ -0.26
SCN2A-206ENST00000486878 DGAT1O75907 488 aa13.38□□□□□ -0.27
SCN2A-206ENST00000486878 NR6A1Q15406 480 aa13.38□□□□□ -0.27
SCN2A-206ENST00000486878 TMEM132AQ24JP5 1023 aa13.38□□□□□ -0.27
SCN2A-206ENST00000486878 BPHLQ86WA6 291 aaPredicted RBP13.38□□□□□ -0.27
SCN2A-206ENST00000486878 FKBPLQ9UIM3 349 aa13.38□□□□□ -0.27
SCN2A-206ENST00000486878 TTC24A2A3L6 582 aaPredicted RBP13.36□□□□□ -0.27
SCN2A-206ENST00000486878 MPNDQ8N594 471 aa13.36□□□□□ -0.27
SCN2A-206ENST00000486878 HMX1Q9NP08 348 aaPredicted RBP13.36□□□□□ -0.27
SCN2A-206ENST00000486878 APBB1O00213 710 aa13.35□□□□□ -0.27
SCN2A-206ENST00000486878 SIAH2O43255 324 aa13.35□□□□□ -0.27
SCN2A-206ENST00000486878 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
SCN2A-206ENST00000486878 Q6ZNB5 142 aa13.35□□□□□ -0.27
SCN2A-206ENST00000486878 PKDCCQ504Y2 493 aa13.34□□□□□ -0.27
SCN2A-206ENST00000486878 SH3BP5LQ7L8J4 393 aa13.33□□□□□ -0.28
SCN2A-206ENST00000486878 SH3RF1Q7Z6J0 888 aa13.33□□□□□ -0.28
SCN2A-206ENST00000486878 FAM174AQ8TBP5 190 aa13.33□□□□□ -0.28
SCN2A-206ENST00000486878 FOXJ1Q92949 421 aa13.33□□□□□ -0.28
SCN2A-206ENST00000486878 GPSM3Q9Y4H4 160 aa13.33□□□□□ -0.28
SCN2A-206ENST00000486878 FAM187AA6NFU0 413 aa13.32□□□□□ -0.28
SCN2A-206ENST00000486878 AGERQ15109 404 aa13.32□□□□□ -0.28
SCN2A-206ENST00000486878 TRIM34Q9BYJ4 488 aa13.32□□□□□ -0.28
SCN2A-206ENST00000486878 EPS8L1Q8TE68 723 aa13.3□□□□□ -0.28
SCN2A-206ENST00000486878 GJD4Q96KN9 370 aaPredicted RBP13.29□□□□□ -0.28
SCN2A-206ENST00000486878 C1QTNF2Q9BXJ5 285 aa13.29□□□□□ -0.28
SCN2A-206ENST00000486878 AVPP01185 164 aa13.28□□□□□ -0.28
SCN2A-206ENST00000486878 SMPD1P17405 629 aa13.28□□□□□ -0.28
SCN2A-206ENST00000486878 PTK2Q05397 1052 aa13.28□□□□□ -0.28
SCN2A-206ENST00000486878 C4orf48Q5BLP8 95 aa13.28□□□□□ -0.28
SCN2A-206ENST00000486878 MTMR14Q8NCE2 650 aa13.28□□□□□ -0.28
SCN2A-206ENST00000486878 ALDH1A1P00352 501 aa13.27□□□□□ -0.29
SCN2A-206ENST00000486878 TRAF7Q6Q0C0 670 aa13.27□□□□□ -0.29
SCN2A-206ENST00000486878 CDK15Q96Q40 435 aa13.27□□□□□ -0.29
SCN2A-206ENST00000486878 TRMT44Q8IYL2 757 aaKnown RBP13.26□□□□□ -0.29
SCN2A-206ENST00000486878 ARHGAP9Q9BRR9 750 aa13.26□□□□□ -0.29
SCN2A-206ENST00000486878 SNRKQ9NRH2 765 aa13.26□□□□□ -0.29
SCN2A-206ENST00000486878 J3QL48 77 aa13.25□□□□□ -0.29
SCN2A-206ENST00000486878 CTC1Q2NKJ3 1217 aa13.24□□□□□ -0.29
SCN2A-206ENST00000486878 CRIPAKQ8N1N5 446 aa13.24□□□□□ -0.29
SCN2A-206ENST00000486878 WASF2Q9Y6W5 498 aa13.24□□□□□ -0.29
SCN2A-206ENST00000486878 MAGEB6P1A0A0J9YX57 407 aa13.23□□□□□ -0.29
SCN2A-206ENST00000486878 MYT1Q01538 1121 aa13.23□□□□□ -0.29
SCN2A-206ENST00000486878 PRM3Q9NNZ6 103 aa13.23□□□□□ -0.29
SCN2A-206ENST00000486878 MAP4K5Q9Y4K4 846 aa13.23□□□□□ -0.29
SCN2A-206ENST00000486878 NDUFB9Q9Y6M9 179 aa13.23□□□□□ -0.29
SCN2A-206ENST00000486878 TLL2Q9Y6L7 1015 aa13.22□□□□□ -0.29
SCN2A-206ENST00000486878 SMCPP49901 116 aaPredicted RBP13.21□□□□□ -0.29
SCN2A-206ENST00000486878 ERFEQ4G0M1 354 aa13.21□□□□□ -0.29
SCN2A-206ENST00000486878 ZBTB33Q86T24 672 aa13.21□□□□□ -0.29
SCN2A-206ENST00000486878 CDV3Q9UKY7 258 aaKnown RBP13.21□□□□□ -0.29
SCN2A-206ENST00000486878 ADH1CP00326 375 aa13.2□□□□□ -0.3
SCN2A-206ENST00000486878 CARD14Q9BXL6 1004 aa13.2□□□□□ -0.3
SCN2A-206ENST00000486878 LCE2BO14633 110 aa13.18□□□□□ -0.3
SCN2A-206ENST00000486878 NR5A1Q13285 461 aa13.18□□□□□ -0.3
SCN2A-206ENST00000486878 OCSTAMPQ9BR26 566 aa13.18□□□□□ -0.3
SCN2A-206ENST00000486878 ZBBXA8MT70 800 aa13.17□□□□□ -0.3
SCN2A-206ENST00000486878 ADAM32Q8TC27 787 aa13.17□□□□□ -0.3
SCN2A-206ENST00000486878 MCM6Q14566 821 aa13.16□□□□□ -0.3
SCN2A-206ENST00000486878 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
SCN2A-206ENST00000486878 HPS1Q92902 700 aa13.16□□□□□ -0.3
SCN2A-206ENST00000486878 SLC10A4Q96EP9 437 aa13.16□□□□□ -0.3
SCN2A-206ENST00000486878 AXIN1O15169 862 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 GRM5P41594 1212 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 FLIIQ13045 1269 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 NNTQ13423 1086 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
SCN2A-206ENST00000486878 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 AAASQ9NRG9 546 aa13.14□□□□□ -0.31
SCN2A-206ENST00000486878 GPR37L1O60883 481 aa13.13□□□□□ -0.31
SCN2A-206ENST00000486878 MCCD1P59942 119 aaPredicted RBP13.11□□□□□ -0.31
SCN2A-206ENST00000486878 NR1H3Q13133 447 aa13.11□□□□□ -0.31
SCN2A-206ENST00000486878 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
SCN2A-206ENST00000486878 ZNF330Q9Y3S2 320 aaPredicted RBP13.11□□□□□ -0.31
SCN2A-206ENST00000486878 FBXO45P0C2W1 286 aa13.1□□□□□ -0.31
SCN2A-206ENST00000486878 DZIP3Q86Y13 1208 aaKnown RBP13.09□□□□□ -0.31
SCN2A-206ENST00000486878 TBC1D2BQ9UPU7 963 aa13.09□□□□□ -0.31
SCN2A-206ENST00000486878 ST8SIA5O15466 376 aa13.08□□□□□ -0.32
SCN2A-206ENST00000486878 FSHRP23945 695 aa13.08□□□□□ -0.32
SCN2A-206ENST00000486878 KCTD15Q96SI1 283 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms