RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 AKAP12Q02952 1782 aa15.39■□□□□ 0.05
PRKCB-207ENST00000486868 TNNT2P45379 298 aaPredicted RBP15.38■□□□□ 0.05
PRKCB-207ENST00000486868 KIF20BQ96Q89 1820 aa15.38■□□□□ 0.05
PRKCB-207ENST00000486868 USP31Q70CQ4 1352 aa15.37■□□□□ 0.05
PRKCB-207ENST00000486868 CCDC27Q2M243 656 aa15.37■□□□□ 0.05
PRKCB-207ENST00000486868 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.37■□□□□ 0.05
PRKCB-207ENST00000486868 POLKQ9UBT6 870 aa15.37■□□□□ 0.05
PRKCB-207ENST00000486868 NKTRP30414 1462 aaKnown RBP15.36■□□□□ 0.05
PRKCB-207ENST00000486868 NCKAP5LQ9HCH0 1330 aa15.36■□□□□ 0.05
PRKCB-207ENST00000486868 SHPRHQ149N8 1683 aa15.35■□□□□ 0.05
PRKCB-207ENST00000486868 ITSN1Q15811 1721 aa15.35■□□□□ 0.05
PRKCB-207ENST00000486868 DIAPH1O60610 1272 aaKnown RBP15.35■□□□□ 0.05
PRKCB-207ENST00000486868 FKBP8Q14318 412 aa15.35■□□□□ 0.05
PRKCB-207ENST00000486868 NME9Q86XW9 330 aa15.35■□□□□ 0.05
PRKCB-207ENST00000486868 PHF23Q9BUL5 403 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-207ENST00000486868 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 NRKQ7Z2Y5 1582 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 APAF1O14727 1248 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 GOLGA2Q08379 1002 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 TRMT2AQ8IZ69 625 aaKnown RBP15.34■□□□□ 0.05
PRKCB-207ENST00000486868 FMN2Q9NZ56 1722 aa15.34■□□□□ 0.05
PRKCB-207ENST00000486868 CDK12Q9NYV4 1490 aaPredicted RBP15.33■□□□□ 0.05
PRKCB-207ENST00000486868 NGDNQ8NEJ9 315 aaKnown RBP15.33■□□□□ 0.04
PRKCB-207ENST00000486868 FCHSD2O94868 740 aa15.32■□□□□ 0.04
PRKCB-207ENST00000486868 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
PRKCB-207ENST00000486868 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
PRKCB-207ENST00000486868 KDM4FA0A1W2PPD8 638 aa15.31■□□□□ 0.04
PRKCB-207ENST00000486868 E9PSI1 815 aa15.31■□□□□ 0.04
PRKCB-207ENST00000486868 U2AF1L5P0DN76 240 aaPredicted RBP15.31■□□□□ 0.04
PRKCB-207ENST00000486868 U2AF1Q01081 240 aaKnown RBP eCLIP15.31■□□□□ 0.04
PRKCB-207ENST00000486868 SLFN5Q08AF3 891 aa15.31■□□□□ 0.04
PRKCB-207ENST00000486868 WDR63Q8IWG1 891 aa15.31■□□□□ 0.04
PRKCB-207ENST00000486868 DUSP27Q5VZP5 1158 aa15.3■□□□□ 0.04
PRKCB-207ENST00000486868 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
PRKCB-207ENST00000486868 PLEKHF1Q96S99 279 aa15.3■□□□□ 0.04
PRKCB-207ENST00000486868 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
PRKCB-207ENST00000486868 KIF24Q5T7B8 1368 aa15.29■□□□□ 0.04
PRKCB-207ENST00000486868 TCP11L2Q8N4U5 519 aa15.29■□□□□ 0.04
PRKCB-207ENST00000486868 RCAN3Q9UKA8 241 aa15.29■□□□□ 0.04
PRKCB-207ENST00000486868 DCCP43146 1447 aa15.28■□□□□ 0.04
PRKCB-207ENST00000486868 IL13P35225 146 aa15.28■□□□□ 0.04
PRKCB-207ENST00000486868 PROSER2Q86WR7 435 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-207ENST00000486868 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
PRKCB-207ENST00000486868 CDCA7LQ96GN5 454 aa15.28■□□□□ 0.04
PRKCB-207ENST00000486868 C19orf44Q9H6X5 657 aa15.28■□□□□ 0.04
PRKCB-207ENST00000486868 SALL2Q9Y467 1007 aaPredicted RBP15.28■□□□□ 0.04
PRKCB-207ENST00000486868 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
PRKCB-207ENST00000486868 PMFBP1Q8TBY8 1022 aa15.27■□□□□ 0.04
PRKCB-207ENST00000486868 NALCNQ8IZF0 1738 aa15.26■□□□□ 0.03
PRKCB-207ENST00000486868 PELP1Q8IZL8 1130 aaKnown RBP15.26■□□□□ 0.03
PRKCB-207ENST00000486868 ZRANB1Q9UGI0 708 aa15.26■□□□□ 0.03
PRKCB-207ENST00000486868 U2SURPO15042 1029 aaKnown RBP15.25■□□□□ 0.03
PRKCB-207ENST00000486868 EMILIN1Q9Y6C2 1016 aa15.25■□□□□ 0.03
PRKCB-207ENST00000486868 USP54Q70EL1 1684 aa15.25■□□□□ 0.03
PRKCB-207ENST00000486868 IL16Q14005 1332 aa15.24■□□□□ 0.03
PRKCB-207ENST00000486868 MAPK8IP3Q9UPT6 1336 aa15.24■□□□□ 0.03
PRKCB-207ENST00000486868 PPP4R2Q9NY27 417 aa15.24■□□□□ 0.03
PRKCB-207ENST00000486868 LMTK3Q96Q04 1460 aa15.23■□□□□ 0.03
PRKCB-207ENST00000486868 NEFMP07197 916 aa15.23■□□□□ 0.03
PRKCB-207ENST00000486868 TMPOP42166 694 aaKnown RBP15.23■□□□□ 0.03
PRKCB-207ENST00000486868 RRP1P56182 461 aaKnown RBP15.23■□□□□ 0.03
PRKCB-207ENST00000486868 RSPH6AQ9H0K4 717 aa15.23■□□□□ 0.03
PRKCB-207ENST00000486868 C14orf37Q86TY3 774 aa15.22■□□□□ 0.03
PRKCB-207ENST00000486868 MST1RQ04912 1400 aa15.22■□□□□ 0.03
PRKCB-207ENST00000486868 SBNO1A3KN83 1393 aa15.22■□□□□ 0.03
PRKCB-207ENST00000486868 CT47B1P0C2W7 299 aaPredicted RBP15.21■□□□□ 0.03
PRKCB-207ENST00000486868 RRS1Q15050 365 aaKnown RBP15.21■□□□□ 0.03
PRKCB-207ENST00000486868 FLT4P35916 1363 aa15.21■□□□□ 0.02
PRKCB-207ENST00000486868 SENP3-EIF4A1A0A087X0R7 540 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 PPM1GO15355 546 aaPredicted RBP15.2■□□□□ 0.02
PRKCB-207ENST00000486868 NLRP6P59044 892 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 MYH16Q9H6N6 1097 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 TMEM94Q12767 1356 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 C1orf167Q5SNV9 1468 aa15.2■□□□□ 0.02
PRKCB-207ENST00000486868 MAP2P11137 1827 aaKnown RBP15.2■□□□□ 0.02
PRKCB-207ENST00000486868 FBLN1P23142 703 aa15.19■□□□□ 0.02
PRKCB-207ENST00000486868 CADPS2Q86UW7 1296 aa15.19■□□□□ 0.02
PRKCB-207ENST00000486868 RTL1A6NKG5 1358 aa15.19■□□□□ 0.02
PRKCB-207ENST00000486868 ATF3P18847 181 aa15.18■□□□□ 0.02
PRKCB-207ENST00000486868 HSPA2P54652 639 aa15.18■□□□□ 0.02
PRKCB-207ENST00000486868 PSME1Q06323 249 aa15.18■□□□□ 0.02
PRKCB-207ENST00000486868 ABTB2Q8N961 1025 aa15.18■□□□□ 0.02
PRKCB-207ENST00000486868 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.18■□□□□ 0.02
PRKCB-207ENST00000486868 KCNH5Q8NCM2 988 aa15.18■□□□□ 0.02
PRKCB-207ENST00000486868 MAP3K19Q56UN5 1328 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 RGPD8O14715 1765 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-207ENST00000486868 PIK3C2AO00443 1686 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 ARHGEF10O15013 1369 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 PRKAR2BP31323 418 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 CALD1Q05682 793 aaKnown RBP15.17■□□□□ 0.02
PRKCB-207ENST00000486868 LMOD3Q0VAK6 560 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
PRKCB-207ENST00000486868 NFE2L2Q16236 605 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 SPINK5Q9NQ38 1064 aaPredicted RBP15.17■□□□□ 0.02
PRKCB-207ENST00000486868 TRIM35Q9UPQ4 493 aa15.17■□□□□ 0.02
PRKCB-207ENST00000486868 KIF1AQ12756 1690 aa15.16■□□□□ 0.02
PRKCB-207ENST00000486868 DMRT2Q9Y5R5 561 aa15.16■□□□□ 0.02
PRKCB-207ENST00000486868 RIPK4P57078 832 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms