RNA–Protein interactions for RNA: ENST00000486867.1

SF1-216, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-216ENST00000486867 PIK3C2AO00443 1686 aa18.55■□□□□ 0.56
SF1-216ENST00000486867 MYOM1P52179 1685 aa18.55■□□□□ 0.56
SF1-216ENST00000486867 NINLQ9Y2I6 1382 aa18.55■□□□□ 0.56
SF1-216ENST00000486867 NWD2Q9ULI1 1742 aa18.54■□□□□ 0.56
SF1-216ENST00000486867 PLCH1Q4KWH8 1693 aa18.52■□□□□ 0.56
SF1-216ENST00000486867 NUTM2BA6NNL0 878 aaPredicted RBP18.51■□□□□ 0.55
SF1-216ENST00000486867 NUTM2EB1AL46 878 aaPredicted RBP18.51■□□□□ 0.55
SF1-216ENST00000486867 NUTM2AQ8IVF1 878 aaPredicted RBP18.51■□□□□ 0.55
SF1-216ENST00000486867 ZNF692Q9BU19 519 aaPredicted RBP18.51■□□□□ 0.55
SF1-216ENST00000486867 PHF23Q9BUL5 403 aaPredicted RBP18.5■□□□□ 0.55
SF1-216ENST00000486867 TMF1P82094 1093 aa18.49■□□□□ 0.55
SF1-216ENST00000486867 COL14A1Q05707 1796 aaKnown RBP18.49■□□□□ 0.55
SF1-216ENST00000486867 USP19O94966 1318 aa18.49■□□□□ 0.55
SF1-216ENST00000486867 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.551e-7■■□□□ 12.5
SF1-216ENST00000486867 FNBP4Q8N3X1 1017 aaPredicted RBP18.48■□□□□ 0.55
SF1-216ENST00000486867 NRAPQ86VF7 1730 aa18.48■□□□□ 0.55
SF1-216ENST00000486867 SLIT3O75094 1523 aa18.48■□□□□ 0.55
SF1-216ENST00000486867 SLIT2O94813 1529 aa18.48■□□□□ 0.55
SF1-216ENST00000486867 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
SF1-216ENST00000486867 CDCA8Q53HL2 280 aa18.46■□□□□ 0.55
SF1-216ENST00000486867 SLC12A5Q9H2X9 1139 aa18.46■□□□□ 0.55
SF1-216ENST00000486867 EDC4Q6P2E9 1401 aaKnown RBP18.46■□□□□ 0.55
SF1-216ENST00000486867 AFF2P51816 1311 aa18.46■□□□□ 0.55
SF1-216ENST00000486867 TTC21AQ8NDW8 1320 aa18.46■□□□□ 0.55
SF1-216ENST00000486867 A0A1W2PP64 1363 aa18.45■□□□□ 0.54
SF1-216ENST00000486867 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
SF1-216ENST00000486867 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
SF1-216ENST00000486867 ADAMTS2O95450 1211 aa18.45■□□□□ 0.54
SF1-216ENST00000486867 HSPA5P11021 654 aaKnown RBP18.45■□□□□ 0.54
SF1-216ENST00000486867 ZNF772Q68DY9 489 aaPredicted RBP18.45■□□□□ 0.54
SF1-216ENST00000486867 CABLES1Q8TDN4 633 aa18.45■□□□□ 0.54
SF1-216ENST00000486867 TTC21BQ7Z4L5 1316 aa18.45■□□□□ 0.54
SF1-216ENST00000486867 BCL9LQ86UU0 1499 aa18.45■□□□□ 0.54
SF1-216ENST00000486867 LMOD2Q6P5Q4 547 aa18.44■□□□□ 0.54
SF1-216ENST00000486867 POTEAQ6S8J7 498 aa18.44■□□□□ 0.54
SF1-216ENST00000486867 ILDR2Q71H61 639 aa18.44■□□□□ 0.54
SF1-216ENST00000486867 LMO7Q8WWI1 1683 aa18.44■□□□□ 0.54
SF1-216ENST00000486867 ANKRD36BQ8N2N9 1353 aa18.43■□□□□ 0.54
SF1-216ENST00000486867 C8orf37Q96NL8 207 aa18.43■□□□□ 0.54
SF1-216ENST00000486867 ABTB2Q8N961 1025 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 COL18A1P39060 1754 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 KIF20BQ96Q89 1820 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 CPDO75976 1380 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
SF1-216ENST00000486867 ATRNO75882 1429 aa18.41■□□□□ 0.54
SF1-216ENST00000486867 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
SF1-216ENST00000486867 NGLY1Q96IV0 654 aa18.41■□□□□ 0.54
SF1-216ENST00000486867 CDK12Q9NYV4 1490 aaPredicted RBP18.4■□□□□ 0.54
SF1-216ENST00000486867 NFAT5O94916 1531 aa18.4■□□□□ 0.54
SF1-216ENST00000486867 HDGFL2Q7Z4V5 671 aaPredicted RBP18.4■□□□□ 0.54
SF1-216ENST00000486867 TMC1Q8TDI8 760 aa18.4■□□□□ 0.54
SF1-216ENST00000486867 FAM83GA6ND36 823 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 OVOS2A0A0J9YW53 1432 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 OVOS2Q6IE36 1432 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 ABCC6O95255 1503 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 LTN1O94822 1766 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
SF1-216ENST00000486867 GLI3P10071 1580 aa18.36■□□□□ 0.53
SF1-216ENST00000486867 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
SF1-216ENST00000486867 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
SF1-216ENST00000486867 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
SF1-216ENST00000486867 USP21Q9UK80 565 aa18.36■□□□□ 0.53
SF1-216ENST00000486867 GCP02774 474 aa18.35■□□□□ 0.53
SF1-216ENST00000486867 NLRP6P59044 892 aa18.35■□□□□ 0.53
SF1-216ENST00000486867 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
SF1-216ENST00000486867 ANKRD26Q9UPS8 1709 aa18.35■□□□□ 0.53
SF1-216ENST00000486867 QTRT2Q9H974 415 aaKnown RBP18.34■□□□□ 0.53
SF1-216ENST00000486867 TRPC5Q9UL62 973 aaPredicted RBP18.34■□□□□ 0.53
SF1-216ENST00000486867 CAMTA1Q9Y6Y1 1673 aa18.33■□□□□ 0.52
SF1-216ENST00000486867 C11orf95C9JLR9 678 aaPredicted RBP18.32■□□□□ 0.52
SF1-216ENST00000486867 RBM6P78332 1123 aaKnown RBP18.32■□□□□ 0.52
SF1-216ENST00000486867 PRDM11Q9NQV5 511 aa18.32■□□□□ 0.52
SF1-216ENST00000486867 NME9Q86XW9 330 aa18.31■□□□□ 0.52
SF1-216ENST00000486867 KCNH5Q8NCM2 988 aa18.31■□□□□ 0.52
SF1-216ENST00000486867 AATKQ6ZMQ8 1374 aa18.3■□□□□ 0.52
SF1-216ENST00000486867 RXRBP28702 533 aa18.3■□□□□ 0.52
SF1-216ENST00000486867 VPS72Q15906 364 aa18.3■□□□□ 0.52
SF1-216ENST00000486867 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
SF1-216ENST00000486867 BRWD3Q6RI45 1802 aa18.3■□□□□ 0.52
SF1-216ENST00000486867 PLEKHG5O94827 1062 aa18.29■□□□□ 0.52
SF1-216ENST00000486867 ZC3H6P61129 1189 aaKnown RBP18.29■□□□□ 0.52
SF1-216ENST00000486867 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
SF1-216ENST00000486867 ZRANB1Q9UGI0 708 aa18.29■□□□□ 0.52
SF1-216ENST00000486867 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
SF1-216ENST00000486867 BTG4Q9NY30 223 aa18.28■□□□□ 0.52
SF1-216ENST00000486867 RGS12O14924 1447 aa18.28■□□□□ 0.52
SF1-216ENST00000486867 COL5A2P05997 1499 aaPredicted RBP18.27■□□□□ 0.52
SF1-216ENST00000486867 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
SF1-216ENST00000486867 NSD3Q9BZ95 1437 aa18.27■□□□□ 0.52
SF1-216ENST00000486867 GJD4Q96KN9 370 aaPredicted RBP18.27■□□□□ 0.52
SF1-216ENST00000486867 THSD7AQ9UPZ6 1657 aa18.27■□□□□ 0.52
SF1-216ENST00000486867 WNK3Q9BYP7 1800 aa18.26■□□□□ 0.51
SF1-216ENST00000486867 FYB1O15117 783 aa18.26■□□□□ 0.51
SF1-216ENST00000486867 CHRNA2Q15822 529 aa18.26■□□□□ 0.51
SF1-216ENST00000486867 MAP2P11137 1827 aaKnown RBP18.25■□□□□ 0.51
SF1-216ENST00000486867 SOCS7O14512 581 aa18.24■□□□□ 0.51
SF1-216ENST00000486867 ONECUT3O60422 494 aaPredicted RBP18.24■□□□□ 0.51
SF1-216ENST00000486867 FAM208AQ9UK61 1670 aaKnown RBP18.24■□□□□ 0.51
SF1-216ENST00000486867 CCDC7Q96M83 1385 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms