RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 KIF1AQ12756 1690 aa15.83■□□□□ 0.13
ERGIC3-215ENST00000486268 HDGFL2Q7Z4V5 671 aaPredicted RBP15.83■□□□□ 0.12
ERGIC3-215ENST00000486268 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.12
ERGIC3-215ENST00000486268 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
ERGIC3-215ENST00000486268 NUDT16Q96DE0 195 aaKnown RBP15.81■□□□□ 0.12
ERGIC3-215ENST00000486268 A0A1W2PP64 1363 aa15.8■□□□□ 0.12
ERGIC3-215ENST00000486268 HSPA1LP34931 641 aa15.8■□□□□ 0.12
ERGIC3-215ENST00000486268 ESCO1Q5FWF5 840 aa15.8■□□□□ 0.12
ERGIC3-215ENST00000486268 COL16A1Q07092 1604 aaPredicted RBP15.79■□□□□ 0.12
ERGIC3-215ENST00000486268 MORC1Q86VD1 984 aa15.79■□□□□ 0.12
ERGIC3-215ENST00000486268 DDX17Q92841 729 aaKnown RBP15.79■□□□□ 0.12
ERGIC3-215ENST00000486268 MED1Q15648 1581 aaPredicted RBP15.79■□□□□ 0.12
ERGIC3-215ENST00000486268 POLR3AO14802 1390 aaPredicted RBP15.78■□□□□ 0.12
ERGIC3-215ENST00000486268 CD163L1Q9NR16 1453 aa15.78■□□□□ 0.12
ERGIC3-215ENST00000486268 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.12
ERGIC3-215ENST00000486268 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.12
ERGIC3-215ENST00000486268 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
ERGIC3-215ENST00000486268 AKAP12Q02952 1782 aa15.77■□□□□ 0.11
ERGIC3-215ENST00000486268 PXDNQ92626 1479 aa15.77■□□□□ 0.11
ERGIC3-215ENST00000486268 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.11
ERGIC3-215ENST00000486268 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
ERGIC3-215ENST00000486268 CCDC61Q9Y6R9 512 aa15.76■□□□□ 0.11
ERGIC3-215ENST00000486268 TRPM3Q9HCF6 1732 aaPredicted RBP15.76■□□□□ 0.11
ERGIC3-215ENST00000486268 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
ERGIC3-215ENST00000486268 CPSF1Q10570 1443 aaKnown RBP15.75■□□□□ 0.11
ERGIC3-215ENST00000486268 PLEKHG3A1L390 1219 aa15.74■□□□□ 0.11
ERGIC3-215ENST00000486268 FOXO3O43524 673 aa15.74■□□□□ 0.11
ERGIC3-215ENST00000486268 ZNF692Q9BU19 519 aaPredicted RBP15.74■□□□□ 0.11
ERGIC3-215ENST00000486268 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
ERGIC3-215ENST00000486268 PDE3BQ13370 1112 aa15.73■□□□□ 0.11
ERGIC3-215ENST00000486268 EDC4Q6P2E9 1401 aaKnown RBP15.73■□□□□ 0.11
ERGIC3-215ENST00000486268 MON2Q7Z3U7 1717 aa15.72■□□□□ 0.11
ERGIC3-215ENST00000486268 ANKRD26Q9UPS8 1709 aa15.72■□□□□ 0.11
ERGIC3-215ENST00000486268 XPCQ01831 940 aaPredicted RBP15.72■□□□□ 0.11
ERGIC3-215ENST00000486268 NGEFQ8N5V2 710 aa15.72■□□□□ 0.11
ERGIC3-215ENST00000486268 CFAP53Q96M91 514 aa15.72■□□□□ 0.11
ERGIC3-215ENST00000486268 ACEP12821 1306 aa15.71■□□□□ 0.11
ERGIC3-215ENST00000486268 NPHP3Q7Z494 1330 aa15.71■□□□□ 0.11
ERGIC3-215ENST00000486268 SMG6Q86US8 1419 aaKnown RBP15.71■□□□□ 0.11
ERGIC3-215ENST00000486268 NRKQ7Z2Y5 1582 aa15.7■□□□□ 0.1
ERGIC3-215ENST00000486268 ALS2Q96Q42 1657 aa15.7■□□□□ 0.1
ERGIC3-215ENST00000486268 FYB1O15117 783 aa15.7■□□□□ 0.1
ERGIC3-215ENST00000486268 SHPRHQ149N8 1683 aa15.7■□□□□ 0.1
ERGIC3-215ENST00000486268 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
ERGIC3-215ENST00000486268 NGDNQ8NEJ9 315 aaKnown RBP15.69■□□□□ 0.1
ERGIC3-215ENST00000486268 NEFLP07196 543 aa15.68■□□□□ 0.1
ERGIC3-215ENST00000486268 ADAMTS8Q9UP79 889 aa15.68■□□□□ 0.1
ERGIC3-215ENST00000486268 KIF20BQ96Q89 1820 aa15.68■□□□□ 0.1
ERGIC3-215ENST00000486268 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
ERGIC3-215ENST00000486268 USP6P35125 1406 aa15.67■□□□□ 0.1
ERGIC3-215ENST00000486268 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
ERGIC3-215ENST00000486268 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
ERGIC3-215ENST00000486268 COL22A1Q8NFW1 1626 aaPredicted RBP15.66■□□□□ 0.1
ERGIC3-215ENST00000486268 PSME1Q06323 249 aa15.66■□□□□ 0.1
ERGIC3-215ENST00000486268 TNS3Q68CZ2 1445 aa15.66■□□□□ 0.1
ERGIC3-215ENST00000486268 MTHFSP49914 203 aa15.65■□□□□ 0.1
ERGIC3-215ENST00000486268 CRYBG1Q9Y4K1 1723 aa15.65■□□□□ 0.1
ERGIC3-215ENST00000486268 SPATA31A3Q5VYP0 1347 aa15.65■□□□□ 0.1
ERGIC3-215ENST00000486268 PNPLA6Q8IY17 1366 aa15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 PIK3C2AO00443 1686 aa15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 NCBP3Q53F19 620 aaKnown RBP15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 ABCA3Q99758 1704 aa15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 GGNBP2Q9H3C7 697 aa15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 MARF1Q9Y4F3 1742 aaKnown RBP15.64■□□□□ 0.09
ERGIC3-215ENST00000486268 JCADQ9P266 1359 aa15.63■□□□□ 0.09
ERGIC3-215ENST00000486268 LRRC59Q96AG4 307 aaKnown RBP15.63■□□□□ 0.09
ERGIC3-215ENST00000486268 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
ERGIC3-215ENST00000486268 AATKQ6ZMQ8 1374 aa15.62■□□□□ 0.09
ERGIC3-215ENST00000486268 ERICH6BQ5W0A0 696 aa15.62■□□□□ 0.09
ERGIC3-215ENST00000486268 TNNT2P45379 298 aaPredicted RBP15.61■□□□□ 0.09
ERGIC3-215ENST00000486268 TTC21AQ8NDW8 1320 aa15.61■□□□□ 0.09
ERGIC3-215ENST00000486268 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.6■□□□□ 0.09
ERGIC3-215ENST00000486268 TTC21BQ7Z4L5 1316 aa15.6■□□□□ 0.09
ERGIC3-215ENST00000486268 PHRF1Q9P1Y6 1649 aaKnown RBP15.6■□□□□ 0.09
ERGIC3-215ENST00000486268 USP54Q70EL1 1684 aa15.6■□□□□ 0.09
ERGIC3-215ENST00000486268 LRP6O75581 1613 aa15.59■□□□□ 0.09
ERGIC3-215ENST00000486268 PAK3O75914 559 aaPredicted RBP15.59■□□□□ 0.09
ERGIC3-215ENST00000486268 COG3Q96JB2 828 aa15.59■□□□□ 0.09
ERGIC3-215ENST00000486268 RUNDC1Q96C34 613 aa15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 PNNQ9H307 717 aaKnown RBP15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 RGS17Q9UGC6 210 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 SUPT16HQ9Y5B9 1047 aaKnown RBP15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 ARHGEF10O15013 1369 aa15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 COL3A1P02461 1466 aaPredicted RBP15.58■□□□□ 0.08
ERGIC3-215ENST00000486268 NUTM2GQ5VZR2 741 aa15.56■□□□□ 0.08
ERGIC3-215ENST00000486268 LMOD2Q6P5Q4 547 aa15.56■□□□□ 0.08
ERGIC3-215ENST00000486268 ZNF521Q96K83 1311 aa15.56■□□□□ 0.08
ERGIC3-215ENST00000486268 SPATA31A6Q5VVP1 1343 aa15.55■□□□□ 0.08
ERGIC3-215ENST00000486268 DIAPH1O60610 1272 aaKnown RBP15.55■□□□□ 0.08
ERGIC3-215ENST00000486268 FKBP8Q14318 412 aa15.55■□□□□ 0.08
ERGIC3-215ENST00000486268 NME9Q86XW9 330 aa15.55■□□□□ 0.08
ERGIC3-215ENST00000486268 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
ERGIC3-215ENST00000486268 SLIT3O75094 1523 aa15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 CDK12Q9NYV4 1490 aaPredicted RBP15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 USP31Q70CQ4 1352 aa15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 RNF123Q5XPI4 1314 aa15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 ABTB2Q8N961 1025 aa15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 CABLES1Q8TDN4 633 aa15.54■□□□□ 0.08
ERGIC3-215ENST00000486268 OVOS2A0A0J9YW53 1432 aa15.53■□□□□ 0.08
ERGIC3-215ENST00000486268 OVOS2Q6IE36 1432 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms