RNA–Protein interactions for RNA: ENST00000486259.1

PPM1F-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 3

Gene PPM1F, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-207ENST00000486259 NUTM2GQ5VZR2 741 aa21.17■□□□□ 0.98
PPM1F-207ENST00000486259 CABP2Q9NPB3 220 aa21.17■□□□□ 0.98
PPM1F-207ENST00000486259 SBNO2Q9Y2G9 1366 aa21.17■□□□□ 0.98
PPM1F-207ENST00000486259 SLIT2O94813 1529 aa21.17■□□□□ 0.98
PPM1F-207ENST00000486259 FAM83GA6ND36 823 aa21.16■□□□□ 0.98
PPM1F-207ENST00000486259 NBPF8Q3BBV2 869 aa21.16■□□□□ 0.98
PPM1F-207ENST00000486259 UNC5CLQ8IV45 518 aa21.16■□□□□ 0.98
PPM1F-207ENST00000486259 GJD4Q96KN9 370 aaPredicted RBP21.16■□□□□ 0.98
PPM1F-207ENST00000486259 SRPK2P78362 688 aaKnown RBP21.15■□□□□ 0.98
PPM1F-207ENST00000486259 PLCH1Q4KWH8 1693 aa21.15■□□□□ 0.98
PPM1F-207ENST00000486259 ACEP12821 1306 aa21.14■□□□□ 0.97
PPM1F-207ENST00000486259 TOPAZ1Q8N9V7 1692 aa21.13■□□□□ 0.97
PPM1F-207ENST00000486259 GLI3P10071 1580 aa21.13■□□□□ 0.97
PPM1F-207ENST00000486259 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
PPM1F-207ENST00000486259 CCDC9Q9Y3X0 531 aaKnown RBP21.12■□□□□ 0.97
PPM1F-207ENST00000486259 CCDC61Q9Y6R9 512 aa21.12■□□□□ 0.97
PPM1F-207ENST00000486259 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.11■□□□□ 0.97
PPM1F-207ENST00000486259 CRYBG1Q9Y4K1 1723 aa21.09■□□□□ 0.97
PPM1F-207ENST00000486259 EP400Q96L91 3159 aa21.09■□□□□ 0.97
PPM1F-207ENST00000486259 BTG4Q9NY30 223 aa21.09■□□□□ 0.97
PPM1F-207ENST00000486259 PPIP5K1Q6PFW1 1433 aa21.08■□□□□ 0.97
PPM1F-207ENST00000486259 POLR3AO14802 1390 aaPredicted RBP21.08■□□□□ 0.96
PPM1F-207ENST00000486259 PLEKHG3A1L390 1219 aa21.07■□□□□ 0.96
PPM1F-207ENST00000486259 ZC3H6P61129 1189 aaKnown RBP21.06■□□□□ 0.96
PPM1F-207ENST00000486259 CHRNA2Q15822 529 aa21.06■□□□□ 0.96
PPM1F-207ENST00000486259 VPS72Q15906 364 aa21.06■□□□□ 0.96
PPM1F-207ENST00000486259 CABP1Q9NZU7 370 aa21.06■□□□□ 0.96
PPM1F-207ENST00000486259 ATAD2Q6PL18 1390 aa21.06■□□□□ 0.96
PPM1F-207ENST00000486259 NWD2Q9ULI1 1742 aa21.05■□□□□ 0.96
PPM1F-207ENST00000486259 CDCA8Q53HL2 280 aa21.05■□□□□ 0.96
PPM1F-207ENST00000486259 BRWD3Q6RI45 1802 aa21.04■□□□□ 0.96
PPM1F-207ENST00000486259 PUS7Q96PZ0 661 aaKnown RBP21.04■□□□□ 0.96
PPM1F-207ENST00000486259 NRAPQ86VF7 1730 aa21.04■□□□□ 0.96
PPM1F-207ENST00000486259 KIAA0232Q92628 1395 aa21.03■□□□□ 0.96
PPM1F-207ENST00000486259 USP47Q96K76 1375 aa21.03■□□□□ 0.96
PPM1F-207ENST00000486259 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
PPM1F-207ENST00000486259 ABTB2Q8N961 1025 aa21.03■□□□□ 0.96
PPM1F-207ENST00000486259 PRDM11Q9NQV5 511 aa21.03■□□□□ 0.96
PPM1F-207ENST00000486259 PHRF1Q9P1Y6 1649 aaKnown RBP21.03■□□□□ 0.96
PPM1F-207ENST00000486259 BRD4O60885 1362 aaPredicted RBP21.02■□□□□ 0.96
PPM1F-207ENST00000486259 COL14A1Q05707 1796 aaKnown RBP21.02■□□□□ 0.96
PPM1F-207ENST00000486259 NINLQ9Y2I6 1382 aa21.01■□□□□ 0.95
PPM1F-207ENST00000486259 A0A0G2JS52 829 aa21.01■□□□□ 0.95
PPM1F-207ENST00000486259 MYT1Q01538 1121 aa21.01■□□□□ 0.95
PPM1F-207ENST00000486259 FAM98CQ17RN3 349 aaKnown RBP21■□□□□ 0.95
PPM1F-207ENST00000486259 STRN4Q9NRL3 753 aa20.98■□□□□ 0.95
PPM1F-207ENST00000486259 TMF1P82094 1093 aa20.97■□□□□ 0.95
PPM1F-207ENST00000486259 ZBTB7CA1YPR0 619 aa20.96■□□□□ 0.95
PPM1F-207ENST00000486259 EIF4G2P78344 907 aaKnown RBP eCLIP20.96■□□□□ 0.95
PPM1F-207ENST00000486259 FAM182BQ5T319 152 aa20.96■□□□□ 0.95
PPM1F-207ENST00000486259 NRKQ7Z2Y5 1582 aa20.95■□□□□ 0.94
PPM1F-207ENST00000486259 USP6P35125 1406 aa20.95■□□□□ 0.94
PPM1F-207ENST00000486259 ONECUT3O60422 494 aaPredicted RBP20.94■□□□□ 0.94
PPM1F-207ENST00000486259 USP35Q9P2H5 1018 aa20.94■□□□□ 0.94
PPM1F-207ENST00000486259 USP19O94966 1318 aa20.93■□□□□ 0.94
PPM1F-207ENST00000486259 SPATA31A5Q5VU36 1347 aa20.93■□□□□ 0.94
PPM1F-207ENST00000486259 SPATA31A7Q8IWB4 1347 aa20.93■□□□□ 0.94
PPM1F-207ENST00000486259 ST20-MTHFSA0A0A6YYL1 179 aa20.92■□□□□ 0.94
PPM1F-207ENST00000486259 GCP02774 474 aa20.92■□□□□ 0.94
PPM1F-207ENST00000486259 NLRP6P59044 892 aa20.92■□□□□ 0.94
PPM1F-207ENST00000486259 KRT27Q7Z3Y8 459 aa20.92■□□□□ 0.94
PPM1F-207ENST00000486259 NLRP13Q86W25 1043 aa20.92■□□□□ 0.94
PPM1F-207ENST00000486259 ZNF692Q9BU19 519 aaPredicted RBP20.92■□□□□ 0.94
PPM1F-207ENST00000486259 SOX12O15370 315 aa20.91■□□□□ 0.94
PPM1F-207ENST00000486259 AKAP12Q02952 1782 aa20.91■□□□□ 0.94
PPM1F-207ENST00000486259 CAMTA1Q9Y6Y1 1673 aa20.91■□□□□ 0.94
PPM1F-207ENST00000486259 ZEB1P37275 1124 aaPredicted RBP20.9■□□□□ 0.94
PPM1F-207ENST00000486259 DEFB132Q7Z7B7 95 aa20.9■□□□□ 0.94
PPM1F-207ENST00000486259 PIK3C2AO00443 1686 aa20.89■□□□□ 0.94
PPM1F-207ENST00000486259 SSH2Q76I76 1423 aa20.89■□□□□ 0.94
PPM1F-207ENST00000486259 EVA1CP58658 441 aa20.89■□□□□ 0.93
PPM1F-207ENST00000486259 LARP1Q6PKG0 1096 aaKnown RBP20.89■□□□□ 0.93
PPM1F-207ENST00000486259 SPATA31A1Q5TZJ5 1347 aa20.88■□□□□ 0.93
PPM1F-207ENST00000486259 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
PPM1F-207ENST00000486259 TTC21BQ7Z4L5 1316 aa20.87■□□□□ 0.93
PPM1F-207ENST00000486259 TERF2IPQ9NYB0 399 aa20.87■□□□□ 0.93
PPM1F-207ENST00000486259 HDGFL2Q7Z4V5 671 aaPredicted RBP20.86■□□□□ 0.93
PPM1F-207ENST00000486259 TMC1Q8TDI8 760 aa20.86■□□□□ 0.93
PPM1F-207ENST00000486259 TESK2Q96S53 571 aa20.86■□□□□ 0.93
PPM1F-207ENST00000486259 LMO7Q8WWI1 1683 aa20.86■□□□□ 0.93
PPM1F-207ENST00000486259 MON2Q7Z3U7 1717 aa20.85■□□□□ 0.93
PPM1F-207ENST00000486259 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.85■□□□□ 0.93
PPM1F-207ENST00000486259 SLC12A5Q9H2X9 1139 aa20.85■□□□□ 0.93
PPM1F-207ENST00000486259 BLMP54132 1417 aaPredicted RBP20.85■□□□□ 0.93
PPM1F-207ENST00000486259 CPDO75976 1380 aa20.85■□□□□ 0.93
PPM1F-207ENST00000486259 KTN1Q86UP2 1357 aaKnown RBP20.85■□□□□ 0.93
PPM1F-207ENST00000486259 THSD7AQ9UPZ6 1657 aa20.84■□□□□ 0.93
PPM1F-207ENST00000486259 CPSF1Q10570 1443 aaKnown RBP20.84■□□□□ 0.93
PPM1F-207ENST00000486259 CCDC125Q86Z20 511 aa20.83■□□□□ 0.93
PPM1F-207ENST00000486259 SLIT3O75094 1523 aa20.83■□□□□ 0.92
PPM1F-207ENST00000486259 CD163L1Q9NR16 1453 aa20.81■□□□□ 0.92
PPM1F-207ENST00000486259 TTC21AQ8NDW8 1320 aa20.81■□□□□ 0.92
PPM1F-207ENST00000486259 AXIN2Q9Y2T1 843 aa20.81■□□□□ 0.92
PPM1F-207ENST00000486259 NME9Q86XW9 330 aa20.8■□□□□ 0.92
PPM1F-207ENST00000486259 COL5A2P05997 1499 aaPredicted RBP20.8■□□□□ 0.92
PPM1F-207ENST00000486259 SRCAPQ6ZRS2 3230 aa20.8■□□□□ 0.92
PPM1F-207ENST00000486259 SF3B2Q13435 895 aaKnown RBP20.79■□□□□ 0.92
PPM1F-207ENST00000486259 COL18A1P39060 1754 aa20.77■□□□□ 0.92
PPM1F-207ENST00000486259 RGPD5Q99666 1765 aa20.77■□□□□ 0.92
PPM1F-207ENST00000486259 ANKRD36BQ8N2N9 1353 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms