RNA–Protein interactions for RNA: ENST00000485985.1

LMBR1-217, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-217ENST00000485985 GPRASP1Q5JY77 1395 aa30.32■■■□□ 2.44
LMBR1-217ENST00000485985 WASLO00401 505 aaPredicted RBP30.32■■■□□ 2.44
LMBR1-217ENST00000485985 KRT27Q7Z3Y8 459 aa30.32■■■□□ 2.44
LMBR1-217ENST00000485985 SF3B2Q13435 895 aaKnown RBP30.31■■■□□ 2.44
LMBR1-217ENST00000485985 NRAPQ86VF7 1730 aa30.28■■■□□ 2.44
LMBR1-217ENST00000485985 BTG4Q9NY30 223 aa30.28■■■□□ 2.44
LMBR1-217ENST00000485985 QRICH2Q9H0J4 1663 aa30.27■■■□□ 2.44
LMBR1-217ENST00000485985 NBPF1Q3BBV0 1214 aa30.26■■■□□ 2.43
LMBR1-217ENST00000485985 COL14A1Q05707 1796 aaKnown RBP30.26■■■□□ 2.43
LMBR1-217ENST00000485985 TRPM1Q7Z4N2 1603 aa30.25■■■□□ 2.43
LMBR1-217ENST00000485985 A0A0G2JS52 829 aa30.24■■■□□ 2.43
LMBR1-217ENST00000485985 MYT1Q01538 1121 aa30.24■■■□□ 2.43
LMBR1-217ENST00000485985 FAM98CQ17RN3 349 aaKnown RBP30.24■■■□□ 2.43
LMBR1-217ENST00000485985 NGDNQ8NEJ9 315 aaKnown RBP30.24■■■□□ 2.43
LMBR1-217ENST00000485985 PAK3O75914 559 aaPredicted RBP30.2■■■□□ 2.43
LMBR1-217ENST00000485985 PHRF1Q9P1Y6 1649 aaKnown RBP30.18■■■□□ 2.42
LMBR1-217ENST00000485985 L3MBTL2Q969R5 705 aa30.17■■■□□ 2.42
LMBR1-217ENST00000485985 NUDT16Q96DE0 195 aaKnown RBP30.17■■■□□ 2.42
LMBR1-217ENST00000485985 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
LMBR1-217ENST00000485985 SPATA31A5Q5VU36 1347 aa30.17■■■□□ 2.42
LMBR1-217ENST00000485985 SPATA31A7Q8IWB4 1347 aa30.17■■■□□ 2.42
LMBR1-217ENST00000485985 CDK19Q9BWU1 502 aa30.16■■■□□ 2.42
LMBR1-217ENST00000485985 BAG6P46379 1132 aa30.15■■■□□ 2.42
LMBR1-217ENST00000485985 PRDM11Q9NQV5 511 aa30.15■■■□□ 2.42
LMBR1-217ENST00000485985 POLR3AO14802 1390 aaPredicted RBP30.11■■■□□ 2.41
LMBR1-217ENST00000485985 FAM182BQ5T319 152 aa30.1■■■□□ 2.41
LMBR1-217ENST00000485985 CENPJQ9HC77 1338 aaPredicted RBP30.1■■■□□ 2.41
LMBR1-217ENST00000485985 THSD7AQ9UPZ6 1657 aa30.08■■■□□ 2.41
LMBR1-217ENST00000485985 KIAA0232Q92628 1395 aa30.08■■■□□ 2.41
LMBR1-217ENST00000485985 RGPD1P0DJD0 1748 aa30.08■■■□□ 2.41
LMBR1-217ENST00000485985 NEUROD1Q13562 356 aa30.06■■■□□ 2.4
LMBR1-217ENST00000485985 CHRNA2Q15822 529 aa30.06■■■□□ 2.4
LMBR1-217ENST00000485985 ACEP12821 1306 aa30.05■■■□□ 2.4
LMBR1-217ENST00000485985 LRP5O75197 1615 aa30.05■■■□□ 2.4
LMBR1-217ENST00000485985 PSDA5PKW4 1024 aaPredicted RBP30.05■■■□□ 2.4
LMBR1-217ENST00000485985 EN1Q05925 392 aaPredicted RBP30.05■■■□□ 2.4
LMBR1-217ENST00000485985 CCDC61Q9Y6R9 512 aa30.05■■■□□ 2.4
LMBR1-217ENST00000485985 SPATA31A1Q5TZJ5 1347 aa30.04■■■□□ 2.4
LMBR1-217ENST00000485985 NRKQ7Z2Y5 1582 aa30.04■■■□□ 2.4
LMBR1-217ENST00000485985 ZC3H6P61129 1189 aaKnown RBP30.03■■■□□ 2.4
LMBR1-217ENST00000485985 NBPF8Q3BBV2 869 aa30.03■■■□□ 2.4
LMBR1-217ENST00000485985 NUTM2GQ5VZR2 741 aa30.03■■■□□ 2.4
LMBR1-217ENST00000485985 PPIP5K1Q6PFW1 1433 aa30.03■■■□□ 2.4
LMBR1-217ENST00000485985 PLEKHG3A1L390 1219 aa30.02■■■□□ 2.4
LMBR1-217ENST00000485985 STRN4Q9NRL3 753 aa30.02■■■□□ 2.4
LMBR1-217ENST00000485985 SRPK2P78362 688 aaKnown RBP29.99■■■□□ 2.39
LMBR1-217ENST00000485985 CABP2Q9NPB3 220 aa29.99■■■□□ 2.39
LMBR1-217ENST00000485985 ROCK2O75116 1388 aaKnown RBP29.99■■■□□ 2.39
LMBR1-217ENST00000485985 DISP2A7MBM2 1401 aa29.98■■■□□ 2.39
LMBR1-217ENST00000485985 TNS1Q9HBL0 1735 aaKnown RBP29.98■■■□□ 2.39
LMBR1-217ENST00000485985 FAM196AQ6ZSG2 479 aa29.95■■■□□ 2.39
LMBR1-217ENST00000485985 ABTB2Q8N961 1025 aa29.95■■■□□ 2.39
LMBR1-217ENST00000485985 AKAP12Q02952 1782 aa29.95■■■□□ 2.38
LMBR1-217ENST00000485985 EVA1CP58658 441 aa29.94■■■□□ 2.38
LMBR1-217ENST00000485985 LMO7Q8WWI1 1683 aa29.93■■■□□ 2.38
LMBR1-217ENST00000485985 USP35Q9P2H5 1018 aa29.93■■■□□ 2.38
LMBR1-217ENST00000485985 SSH2Q76I76 1423 aa29.93■■■□□ 2.38
LMBR1-217ENST00000485985 EZH2Q15910 746 aaKnown RBP29.92■■■□□ 2.38
LMBR1-217ENST00000485985 BARGINQ6ZT62 677 aa29.92■■■□□ 2.38
LMBR1-217ENST00000485985 PIK3C2AO00443 1686 aa29.91■■■□□ 2.38
LMBR1-217ENST00000485985 CAMTA1Q9Y6Y1 1673 aa29.91■■■□□ 2.38
LMBR1-217ENST00000485985 TRIM37O94972 964 aa29.91■■■□□ 2.38
LMBR1-217ENST00000485985 R3HDM1Q15032 1099 aaKnown RBP29.91■■■□□ 2.38
LMBR1-217ENST00000485985 USP19O94966 1318 aa29.9■■■□□ 2.38
LMBR1-217ENST00000485985 CPDO75976 1380 aa29.9■■■□□ 2.38
LMBR1-217ENST00000485985 USP6P35125 1406 aa29.89■■■□□ 2.38
LMBR1-217ENST00000485985 LARP1Q6PKG0 1096 aaKnown RBP29.89■■■□□ 2.38
LMBR1-217ENST00000485985 CAMKK2Q96RR4 588 aa29.89■■■□□ 2.38
LMBR1-217ENST00000485985 PDE3BQ13370 1112 aa29.87■■■□□ 2.37
LMBR1-217ENST00000485985 NLRP13Q86W25 1043 aa29.87■■■□□ 2.37
LMBR1-217ENST00000485985 EVC2Q86UK5 1308 aa29.87■■■□□ 2.37
LMBR1-217ENST00000485985 CABP1Q9NZU7 370 aa29.86■■■□□ 2.37
LMBR1-217ENST00000485985 APBA3O96018 575 aa29.85■■■□□ 2.37
LMBR1-217ENST00000485985 GCP02774 474 aa29.85■■■□□ 2.37
LMBR1-217ENST00000485985 TCP11L2Q8N4U5 519 aa29.85■■■□□ 2.37
LMBR1-217ENST00000485985 BRD4O60885 1362 aaPredicted RBP29.84■■■□□ 2.37
LMBR1-217ENST00000485985 SLIT3O75094 1523 aa29.84■■■□□ 2.37
LMBR1-217ENST00000485985 MON2Q7Z3U7 1717 aa29.83■■■□□ 2.37
LMBR1-217ENST00000485985 PARD3Q8TEW0 1356 aa29.82■■■□□ 2.36
LMBR1-217ENST00000485985 TONSLQ96HA7 1378 aa29.81■■■□□ 2.36
LMBR1-217ENST00000485985 THRAP3Q9Y2W1 955 aaKnown RBP29.81■■■□□ 2.36
LMBR1-217ENST00000485985 SBNO2Q9Y2G9 1366 aa29.79■■■□□ 2.36
LMBR1-217ENST00000485985 TRIM26Q12899 539 aaPredicted RBP29.78■■■□□ 2.36
LMBR1-217ENST00000485985 COL5A2P05997 1499 aaPredicted RBP29.78■■■□□ 2.36
LMBR1-217ENST00000485985 COL18A1P39060 1754 aa29.77■■■□□ 2.36
LMBR1-217ENST00000485985 NLRP6P59044 892 aa29.75■■■□□ 2.35
LMBR1-217ENST00000485985 RREB1Q92766 1687 aa29.75■■■□□ 2.35
LMBR1-217ENST00000485985 PARP4Q9UKK3 1724 aaKnown RBP29.74■■■□□ 2.35
LMBR1-217ENST00000485985 CARD11Q9BXL7 1154 aa29.74■■■□□ 2.35
LMBR1-217ENST00000485985 RGPD5Q99666 1765 aa29.74■■■□□ 2.35
LMBR1-217ENST00000485985 CRB1P82279 1406 aa29.73■■■□□ 2.35
LMBR1-217ENST00000485985 CPSF1Q10570 1443 aaKnown RBP29.73■■■□□ 2.35
LMBR1-217ENST00000485985 NUP188Q5SRE5 1749 aa29.71■■■□□ 2.35
LMBR1-217ENST00000485985 ZBTB7CA1YPR0 619 aa29.71■■■□□ 2.35
LMBR1-217ENST00000485985 AATKQ6ZMQ8 1374 aa29.71■■■□□ 2.35
LMBR1-217ENST00000485985 WNK3Q9BYP7 1800 aa29.71■■■□□ 2.35
LMBR1-217ENST00000485985 USP54Q70EL1 1684 aa29.7■■■□□ 2.35
LMBR1-217ENST00000485985 NBPF14Q5TI25 921 aa29.69■■■□□ 2.34
LMBR1-217ENST00000485985 CD163L1Q9NR16 1453 aa29.68■■■□□ 2.34
LMBR1-217ENST00000485985 C11orf95C9JLR9 678 aaPredicted RBP29.68■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms