RNA–Protein interactions for RNA: ENST00000485303.5

NECTIN3-206, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NECTIN3, Length 3,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-206ENST00000485303 PHF8Q9UPP1 1060 aa24.49■■□□□ 1.51
NECTIN3-206ENST00000485303 FOXO3O43524 673 aa24.48■■□□□ 1.51
NECTIN3-206ENST00000485303 ATF3P18847 181 aa24.48■■□□□ 1.51
NECTIN3-206ENST00000485303 ABTB2Q8N961 1025 aa24.48■■□□□ 1.51
NECTIN3-206ENST00000485303 MAPK8IP3Q9UPT6 1336 aa24.48■■□□□ 1.51
NECTIN3-206ENST00000485303 CPS1P31327 1500 aa24.48■■□□□ 1.51
NECTIN3-206ENST00000485303 HMOX1P09601 288 aa24.47■■□□□ 1.51
NECTIN3-206ENST00000485303 PIK3R4Q99570 1358 aa24.46■■□□□ 1.51
NECTIN3-206ENST00000485303 CD163L1Q9NR16 1453 aa24.45■■□□□ 1.5
NECTIN3-206ENST00000485303 ORAI2Q96SN7 254 aa24.45■■□□□ 1.5
NECTIN3-206ENST00000485303 ATP7BP35670 1465 aa24.44■■□□□ 1.5
NECTIN3-206ENST00000485303 EDC4Q6P2E9 1401 aaKnown RBP24.44■■□□□ 1.5
NECTIN3-206ENST00000485303 PLEKHG3A1L390 1219 aa24.44■■□□□ 1.5
NECTIN3-206ENST00000485303 PTCH1Q13635 1447 aa24.44■■□□□ 1.5
NECTIN3-206ENST00000485303 POLKQ9UBT6 870 aa24.43■■□□□ 1.5
NECTIN3-206ENST00000485303 LTV1Q96GA3 475 aaPredicted RBP24.43■■□□□ 1.5
NECTIN3-206ENST00000485303 AMPHP49418 695 aa24.42■■□□□ 1.5
NECTIN3-206ENST00000485303 POLR3AO14802 1390 aaPredicted RBP24.41■■□□□ 1.5
NECTIN3-206ENST00000485303 TCP11L2Q8N4U5 519 aa24.41■■□□□ 1.5
NECTIN3-206ENST00000485303 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.41■■□□□ 1.5
NECTIN3-206ENST00000485303 RUNDC1Q96C34 613 aa24.4■■□□□ 1.5
NECTIN3-206ENST00000485303 GOLGA2Q08379 1002 aa24.39■■□□□ 1.49
NECTIN3-206ENST00000485303 DIP2AQ14689 1571 aa24.38■■□□□ 1.49
NECTIN3-206ENST00000485303 CPSF1Q10570 1443 aaKnown RBP24.36■■□□□ 1.49
NECTIN3-206ENST00000485303 C19orf44Q9H6X5 657 aa24.36■■□□□ 1.49
NECTIN3-206ENST00000485303 TMEM94Q12767 1356 aa24.35■■□□□ 1.49
NECTIN3-206ENST00000485303 DDX17Q92841 729 aaKnown RBP24.35■■□□□ 1.49
NECTIN3-206ENST00000485303 LAS1LQ9Y4W2 734 aaKnown RBP24.34■■□□□ 1.49
NECTIN3-206ENST00000485303 KNDC1Q76NI1 1749 aa24.34■■□□□ 1.49
NECTIN3-206ENST00000485303 PDE3BQ13370 1112 aa24.34■■□□□ 1.49
NECTIN3-206ENST00000485303 USP6P35125 1406 aa24.34■■□□□ 1.49
NECTIN3-206ENST00000485303 PRKAR2BP31323 418 aa24.33■■□□□ 1.49
NECTIN3-206ENST00000485303 RCAN3Q9UKA8 241 aa24.33■■□□□ 1.49
NECTIN3-206ENST00000485303 ZNF335Q9H4Z2 1342 aaPredicted RBP24.32■■□□□ 1.48
NECTIN3-206ENST00000485303 NKTRP30414 1462 aaKnown RBP24.32■■□□□ 1.48
NECTIN3-206ENST00000485303 HSP90AB2PQ58FF8 381 aa24.31■■□□□ 1.48
NECTIN3-206ENST00000485303 ZNF142P52746 1687 aaPredicted RBP24.31■■□□□ 1.48
NECTIN3-206ENST00000485303 BLMP54132 1417 aaPredicted RBP24.3■■□□□ 1.48
NECTIN3-206ENST00000485303 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
NECTIN3-206ENST00000485303 ADGRL3Q9HAR2 1447 aa24.29■■□□□ 1.48
NECTIN3-206ENST00000485303 TTC21AQ8NDW8 1320 aa24.28■■□□□ 1.48
NECTIN3-206ENST00000485303 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
NECTIN3-206ENST00000485303 RIPK4P57078 832 aa24.28■■□□□ 1.48
NECTIN3-206ENST00000485303 PNNQ9H307 717 aaKnown RBP24.27■■□□□ 1.48
NECTIN3-206ENST00000485303 KRT28Q7Z3Y7 464 aa24.27■■□□□ 1.48
NECTIN3-206ENST00000485303 SULT6B1Q6IMI4 303 aa24.26■■□□□ 1.47
NECTIN3-206ENST00000485303 PLIN1O60240 522 aa24.26■■□□□ 1.47
NECTIN3-206ENST00000485303 CANXP27824 592 aaKnown RBP24.25■■□□□ 1.47
NECTIN3-206ENST00000485303 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
NECTIN3-206ENST00000485303 HAP1P54257 671 aaPredicted RBP24.25■■□□□ 1.47
NECTIN3-206ENST00000485303 CADPS2Q86UW7 1296 aa24.25■■□□□ 1.47
NECTIN3-206ENST00000485303 MAP3K19Q56UN5 1328 aa24.24■■□□□ 1.47
NECTIN3-206ENST00000485303 MSH6P52701 1360 aa24.24■■□□□ 1.47
NECTIN3-206ENST00000485303 DMRT2Q9Y5R5 561 aa24.24■■□□□ 1.47
NECTIN3-206ENST00000485303 SPINK5Q9NQ38 1064 aaPredicted RBP24.23■■□□□ 1.47
NECTIN3-206ENST00000485303 XRN1Q8IZH2 1706 aaKnown RBP24.23■■□□□ 1.47
NECTIN3-206ENST00000485303 AEBP1Q8IUX7 1158 aa24.22■■□□□ 1.47
NECTIN3-206ENST00000485303 ANKARQ7Z5J8 1434 aa24.22■■□□□ 1.47
NECTIN3-206ENST00000485303 TMPOP42166 694 aaKnown RBP24.21■■□□□ 1.47
NECTIN3-206ENST00000485303 EIF4A2Q14240 407 aaKnown RBP24.21■■□□□ 1.47
NECTIN3-206ENST00000485303 ZC3H6P61129 1189 aaKnown RBP24.21■■□□□ 1.47
NECTIN3-206ENST00000485303 E9PSI1 815 aa24.2■■□□□ 1.46
NECTIN3-206ENST00000485303 USP32Q8NFA0 1604 aa24.2■■□□□ 1.46
NECTIN3-206ENST00000485303 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
NECTIN3-206ENST00000485303 FCHSD2O94868 740 aa24.19■■□□□ 1.46
NECTIN3-206ENST00000485303 THUMPD2Q9BTF0 503 aaKnown RBP24.19■■□□□ 1.46
NECTIN3-206ENST00000485303 RGPD8O14715 1765 aaPredicted RBP24.19■■□□□ 1.46
NECTIN3-206ENST00000485303 ADGRB2O60241 1585 aa24.18■■□□□ 1.46
NECTIN3-206ENST00000485303 IL13P35225 146 aa24.18■■□□□ 1.46
NECTIN3-206ENST00000485303 CHD2O14647 1828 aaKnown RBP24.18■■□□□ 1.46
NECTIN3-206ENST00000485303 PHACTR3Q96KR7 559 aa24.18■■□□□ 1.46
NECTIN3-206ENST00000485303 B4GALNT3Q6L9W6 998 aa24.17■■□□□ 1.46
NECTIN3-206ENST00000485303 SLFN5Q08AF3 891 aa24.17■■□□□ 1.46
NECTIN3-206ENST00000485303 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
NECTIN3-206ENST00000485303 BCL2L13Q9BXK5 485 aa24.17■■□□□ 1.46
NECTIN3-206ENST00000485303 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
NECTIN3-206ENST00000485303 USHBP1Q8N6Y0 703 aa24.16■■□□□ 1.46
NECTIN3-206ENST00000485303 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
NECTIN3-206ENST00000485303 FRAT1Q92837 279 aaPredicted RBP24.16■■□□□ 1.46
NECTIN3-206ENST00000485303 KIF20BQ96Q89 1820 aa24.15■■□□□ 1.46
NECTIN3-206ENST00000485303 LMTK3Q96Q04 1460 aa24.15■■□□□ 1.46
NECTIN3-206ENST00000485303 RRP1P56182 461 aaKnown RBP24.14■■□□□ 1.46
NECTIN3-206ENST00000485303 RSPH6AQ9H0K4 717 aa24.13■■□□□ 1.45
NECTIN3-206ENST00000485303 AATKQ6ZMQ8 1374 aa24.12■■□□□ 1.45
NECTIN3-206ENST00000485303 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
NECTIN3-206ENST00000485303 MYH16Q9H6N6 1097 aa24.12■■□□□ 1.45
NECTIN3-206ENST00000485303 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
NECTIN3-206ENST00000485303 NALCNQ8IZF0 1738 aa24.12■■□□□ 1.45
NECTIN3-206ENST00000485303 INSRP06213 1382 aa24.11■■□□□ 1.45
NECTIN3-206ENST00000485303 ELL2O00472 640 aaPredicted RBP24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 CSB-PGBD3P0DP91 1061 aa24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 CCDC136Q96JN2 1154 aa24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 OVOS2A0A0J9YW53 1432 aa24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 OVOS2Q6IE36 1432 aa24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 GCP02774 474 aa24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 MAP2P11137 1827 aaKnown RBP24.1■■□□□ 1.45
NECTIN3-206ENST00000485303 C1orf167Q5SNV9 1468 aa24.09■■□□□ 1.45
NECTIN3-206ENST00000485303 FLT4P35916 1363 aa24.09■■□□□ 1.45
NECTIN3-206ENST00000485303 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
NECTIN3-206ENST00000485303 PLEKHF1Q96S99 279 aa24.09■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms