RNA–Protein interactions for RNA: ENST00000485124.1

TMEM40-208, Transcript of transmembrane protein 40, humanhuman

TSL 5

Gene TMEM40, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-208ENST00000485124 LMOD2Q6P5Q4 547 aa14.38□□□□□ -0.11
TMEM40-208ENST00000485124 ZRANB1Q9UGI0 708 aa14.38□□□□□ -0.11
TMEM40-208ENST00000485124 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
TMEM40-208ENST00000485124 SEPT12Q8IYM1 358 aa14.37□□□□□ -0.11
TMEM40-208ENST00000485124 NGDNQ8NEJ9 315 aaKnown RBP14.36□□□□□ -0.11
TMEM40-208ENST00000485124 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
TMEM40-208ENST00000485124 PHRF1Q9P1Y6 1649 aaKnown RBP14.34□□□□□ -0.11
TMEM40-208ENST00000485124 NUDT16Q96DE0 195 aaKnown RBP14.34□□□□□ -0.11
TMEM40-208ENST00000485124 KRT27Q7Z3Y8 459 aa14.33□□□□□ -0.12
TMEM40-208ENST00000485124 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
TMEM40-208ENST00000485124 CCDC9Q9Y3X0 531 aaKnown RBP14.33□□□□□ -0.12
TMEM40-208ENST00000485124 THSD7AQ9UPZ6 1657 aa14.33□□□□□ -0.12
TMEM40-208ENST00000485124 SF3B2Q13435 895 aaKnown RBP14.32□□□□□ -0.12
TMEM40-208ENST00000485124 CCDC61Q9Y6R9 512 aa14.32□□□□□ -0.12
TMEM40-208ENST00000485124 PLEKHG3A1L390 1219 aa14.31□□□□□ -0.12
TMEM40-208ENST00000485124 CDK19Q9BWU1 502 aa14.31□□□□□ -0.12
TMEM40-208ENST00000485124 RGPD1P0DJD0 1748 aa14.31□□□□□ -0.12
TMEM40-208ENST00000485124 SPATA31A5Q5VU36 1347 aa14.31□□□□□ -0.12
TMEM40-208ENST00000485124 SPATA31A7Q8IWB4 1347 aa14.31□□□□□ -0.12
TMEM40-208ENST00000485124 BRD4O60885 1362 aaPredicted RBP14.31□□□□□ -0.12
TMEM40-208ENST00000485124 PAK3O75914 559 aaPredicted RBP14.3□□□□□ -0.12
TMEM40-208ENST00000485124 PRDM11Q9NQV5 511 aa14.29□□□□□ -0.12
TMEM40-208ENST00000485124 PLEKHG5O94827 1062 aa14.28□□□□□ -0.12
TMEM40-208ENST00000485124 ACEP12821 1306 aa14.28□□□□□ -0.12
TMEM40-208ENST00000485124 FAM98CQ17RN3 349 aaKnown RBP14.28□□□□□ -0.12
TMEM40-208ENST00000485124 NBPF8Q3BBV2 869 aa14.28□□□□□ -0.12
TMEM40-208ENST00000485124 QRICH2Q9H0J4 1663 aa14.27□□□□□ -0.12
TMEM40-208ENST00000485124 NRKQ7Z2Y5 1582 aa14.27□□□□□ -0.12
TMEM40-208ENST00000485124 DISP2A7MBM2 1401 aa14.27□□□□□ -0.12
TMEM40-208ENST00000485124 CPDO75976 1380 aa14.27□□□□□ -0.12
TMEM40-208ENST00000485124 KIAA0232Q92628 1395 aa14.27□□□□□ -0.12
TMEM40-208ENST00000485124 SPATA31A1Q5TZJ5 1347 aa14.26□□□□□ -0.13
TMEM40-208ENST00000485124 CENPJQ9HC77 1338 aaPredicted RBP14.26□□□□□ -0.13
TMEM40-208ENST00000485124 BAG6P46379 1132 aa14.26□□□□□ -0.13
TMEM40-208ENST00000485124 DEFB132Q7Z7B7 95 aa14.26□□□□□ -0.13
TMEM40-208ENST00000485124 LRP5O75197 1615 aa14.26□□□□□ -0.13
TMEM40-208ENST00000485124 USP19O94966 1318 aa14.25□□□□□ -0.13
TMEM40-208ENST00000485124 TNS1Q9HBL0 1735 aaKnown RBP14.25□□□□□ -0.13
TMEM40-208ENST00000485124 A0A0G2JS52 829 aa14.25□□□□□ -0.13
TMEM40-208ENST00000485124 MYT1Q01538 1121 aa14.25□□□□□ -0.13
TMEM40-208ENST00000485124 NBPF1Q3BBV0 1214 aa14.25□□□□□ -0.13
TMEM40-208ENST00000485124 LMO7Q8WWI1 1683 aa14.25□□□□□ -0.13
TMEM40-208ENST00000485124 PPIP5K1Q6PFW1 1433 aa14.24□□□□□ -0.13
TMEM40-208ENST00000485124 TRPM1Q7Z4N2 1603 aa14.24□□□□□ -0.13
TMEM40-208ENST00000485124 SSH2Q76I76 1423 aa14.23□□□□□ -0.13
TMEM40-208ENST00000485124 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
TMEM40-208ENST00000485124 BARGINQ6ZT62 677 aa14.22□□□□□ -0.13
TMEM40-208ENST00000485124 NLRP13Q86W25 1043 aa14.22□□□□□ -0.13
TMEM40-208ENST00000485124 ABTB2Q8N961 1025 aa14.22□□□□□ -0.13
TMEM40-208ENST00000485124 CCER1Q8TC90 406 aaPredicted RBP14.22□□□□□ -0.13
TMEM40-208ENST00000485124 CAMTA1Q9Y6Y1 1673 aa14.22□□□□□ -0.13
TMEM40-208ENST00000485124 PARD3Q8TEW0 1356 aa14.21□□□□□ -0.14
TMEM40-208ENST00000485124 ZC3H6P61129 1189 aaKnown RBP14.2□□□□□ -0.14
TMEM40-208ENST00000485124 CHRNA2Q15822 529 aa14.2□□□□□ -0.14
TMEM40-208ENST00000485124 FAM196AQ6ZSG2 479 aa14.2□□□□□ -0.14
TMEM40-208ENST00000485124 THRAP3Q9Y2W1 955 aaKnown RBP14.2□□□□□ -0.14
TMEM40-208ENST00000485124 USP6P35125 1406 aa14.2□□□□□ -0.14
TMEM40-208ENST00000485124 PARP4Q9UKK3 1724 aaKnown RBP14.2□□□□□ -0.14
TMEM40-208ENST00000485124 SLIT3O75094 1523 aa14.2□□□□□ -0.14
TMEM40-208ENST00000485124 GCP02774 474 aa14.19□□□□□ -0.14
TMEM40-208ENST00000485124 L3MBTL2Q969R5 705 aa14.19□□□□□ -0.14
TMEM40-208ENST00000485124 C11orf95C9JLR9 678 aaPredicted RBP14.18□□□□□ -0.14
TMEM40-208ENST00000485124 EVA1CP58658 441 aa14.18□□□□□ -0.14
TMEM40-208ENST00000485124 NUTM2GQ5VZR2 741 aa14.18□□□□□ -0.14
TMEM40-208ENST00000485124 STRN4Q9NRL3 753 aa14.18□□□□□ -0.14
TMEM40-208ENST00000485124 EVC2Q86UK5 1308 aa14.17□□□□□ -0.14
TMEM40-208ENST00000485124 AKAP12Q02952 1782 aa14.17□□□□□ -0.14
TMEM40-208ENST00000485124 TCP11L2Q8N4U5 519 aa14.17□□□□□ -0.14
TMEM40-208ENST00000485124 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
TMEM40-208ENST00000485124 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
TMEM40-208ENST00000485124 PIK3C2AO00443 1686 aa14.17□□□□□ -0.14
TMEM40-208ENST00000485124 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
TMEM40-208ENST00000485124 AATKQ6ZMQ8 1374 aa14.16□□□□□ -0.14
TMEM40-208ENST00000485124 CRB1P82279 1406 aa14.15□□□□□ -0.14
TMEM40-208ENST00000485124 COL18A1P39060 1754 aa14.15□□□□□ -0.14
TMEM40-208ENST00000485124 RREB1Q92766 1687 aa14.15□□□□□ -0.14
TMEM40-208ENST00000485124 SBNO2Q9Y2G9 1366 aa14.15□□□□□ -0.14
TMEM40-208ENST00000485124 EN1Q05925 392 aaPredicted RBP14.15□□□□□ -0.14
TMEM40-208ENST00000485124 LARP1Q6PKG0 1096 aaKnown RBP14.15□□□□□ -0.14
TMEM40-208ENST00000485124 ZNF692Q9BU19 519 aaPredicted RBP14.15□□□□□ -0.14
TMEM40-208ENST00000485124 ROCK2O75116 1388 aaKnown RBP14.14□□□□□ -0.15
TMEM40-208ENST00000485124 PDE3BQ13370 1112 aa14.14□□□□□ -0.15
TMEM40-208ENST00000485124 FAM182BQ5T319 152 aa14.14□□□□□ -0.15
TMEM40-208ENST00000485124 RGPD3A6NKT7 1758 aaPredicted RBP14.14□□□□□ -0.15
TMEM40-208ENST00000485124 RGPD4Q7Z3J3 1758 aa14.14□□□□□ -0.15
TMEM40-208ENST00000485124 WNK3Q9BYP7 1800 aa14.13□□□□□ -0.15
TMEM40-208ENST00000485124 NLRP6P59044 892 aa14.13□□□□□ -0.15
TMEM40-208ENST00000485124 CAMKK2Q96RR4 588 aa14.13□□□□□ -0.15
TMEM40-208ENST00000485124 ABCC6O95255 1503 aa14.13□□□□□ -0.15
TMEM40-208ENST00000485124 USP54Q70EL1 1684 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 KCNH5Q8NCM2 988 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 USP35Q9P2H5 1018 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 PEAK1Q9H792 1746 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 TTC21AQ8NDW8 1320 aa14.12□□□□□ -0.15
TMEM40-208ENST00000485124 TRIM37O94972 964 aa14.11□□□□□ -0.15
TMEM40-208ENST00000485124 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
TMEM40-208ENST00000485124 NUP188Q5SRE5 1749 aa14.11□□□□□ -0.15
TMEM40-208ENST00000485124 LRRC37A3O60309 1634 aa14.11□□□□□ -0.15
TMEM40-208ENST00000485124 SBF2Q86WG5 1849 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms