RNA–Protein interactions for RNA: ENST00000485113.5

CHD1L-207, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 3

Gene CHD1L, Length 377 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-207ENST00000485113 KRT28Q7Z3Y7 464 aa8.02□□□□□ -1.13
CHD1L-207ENST00000485113 FNBP4Q8N3X1 1017 aaPredicted RBP8.02□□□□□ -1.13
CHD1L-207ENST00000485113 UPF1Q92900 1129 aaKnown RBP eCLIP8.02□□□□□ -1.13
CHD1L-207ENST00000485113 USP21Q9UK80 565 aa8.02□□□□□ -1.13
CHD1L-207ENST00000485113 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
CHD1L-207ENST00000485113 SBNO1A3KN83 1393 aa8.01□□□□□ -1.13
CHD1L-207ENST00000485113 EIF3AQ14152 1382 aaKnown RBP8.01□□□□□ -1.13
CHD1L-207ENST00000485113 HIRIP3Q9BW71 556 aaPredicted RBP8.01□□□□□ -1.13
CHD1L-207ENST00000485113 TRPC5Q9UL62 973 aaPredicted RBP8.01□□□□□ -1.13
CHD1L-207ENST00000485113 SLIT2O94813 1529 aa8.01□□□□□ -1.13
CHD1L-207ENST00000485113 ATP7BP35670 1465 aa8□□□□□ -1.13
CHD1L-207ENST00000485113 PSME1Q06323 249 aa8□□□□□ -1.13
CHD1L-207ENST00000485113 PRR36Q9H6K5 1346 aa8□□□□□ -1.13
CHD1L-207ENST00000485113 ARHGEF10O15013 1369 aa7.99□□□□□ -1.13
CHD1L-207ENST00000485113 WNK3Q9BYP7 1800 aa7.99□□□□□ -1.13
CHD1L-207ENST00000485113 PMFBP1Q8TBY8 1022 aa7.99□□□□□ -1.13
CHD1L-207ENST00000485113 SBF2Q86WG5 1849 aa7.99□□□□□ -1.13
CHD1L-207ENST00000485113 RGPD1P0DJD0 1748 aa7.98□□□□□ -1.13
CHD1L-207ENST00000485113 WASLO00401 505 aaPredicted RBP7.98□□□□□ -1.13
CHD1L-207ENST00000485113 CABLES1Q8TDN4 633 aa7.98□□□□□ -1.13
CHD1L-207ENST00000485113 RALGAPBQ86X10 1494 aa7.98□□□□□ -1.13
CHD1L-207ENST00000485113 GPRASP1Q5JY77 1395 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 ATAD2Q6PL18 1390 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 SLC4A2P04920 1241 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 HAP1P54257 671 aaPredicted RBP7.97□□□□□ -1.13
CHD1L-207ENST00000485113 LMOD2Q6P5Q4 547 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 UNC5CLQ8IV45 518 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 MON2Q7Z3U7 1717 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 NRKQ7Z2Y5 1582 aa7.97□□□□□ -1.13
CHD1L-207ENST00000485113 TNS1Q9HBL0 1735 aaKnown RBP7.96□□□□□ -1.14
CHD1L-207ENST00000485113 PLEKHG5O94827 1062 aa7.96□□□□□ -1.14
CHD1L-207ENST00000485113 MYCNP04198 464 aaPredicted RBP7.96□□□□□ -1.14
CHD1L-207ENST00000485113 NBPF1Q3BBV0 1214 aa7.96□□□□□ -1.14
CHD1L-207ENST00000485113 GJD4Q96KN9 370 aaPredicted RBP7.96□□□□□ -1.14
CHD1L-207ENST00000485113 LTN1O94822 1766 aa7.96□□□□□ -1.14
CHD1L-207ENST00000485113 PIK3C2AO00443 1686 aa7.95□□□□□ -1.14
CHD1L-207ENST00000485113 LMO7Q8WWI1 1683 aa7.95□□□□□ -1.14
CHD1L-207ENST00000485113 THSD7AQ9UPZ6 1657 aa7.95□□□□□ -1.14
CHD1L-207ENST00000485113 NGDNQ8NEJ9 315 aaKnown RBP7.95□□□□□ -1.14
CHD1L-207ENST00000485113 NUDT16Q96DE0 195 aaKnown RBP7.95□□□□□ -1.14
CHD1L-207ENST00000485113 COL18A1P39060 1754 aa7.94□□□□□ -1.14
CHD1L-207ENST00000485113 CDK19Q9BWU1 502 aa7.94□□□□□ -1.14
CHD1L-207ENST00000485113 POLR3AO14802 1390 aaPredicted RBP7.94□□□□□ -1.14
CHD1L-207ENST00000485113 PARP4Q9UKK3 1724 aaKnown RBP7.93□□□□□ -1.14
CHD1L-207ENST00000485113 FAM83GA6ND36 823 aa7.93□□□□□ -1.14
CHD1L-207ENST00000485113 PAK3O75914 559 aaPredicted RBP7.93□□□□□ -1.14
CHD1L-207ENST00000485113 VPS72Q15906 364 aa7.93□□□□□ -1.14
CHD1L-207ENST00000485113 L3MBTL2Q969R5 705 aa7.93□□□□□ -1.14
CHD1L-207ENST00000485113 SIN3AQ96ST3 1273 aa7.93□□□□□ -1.14
CHD1L-207ENST00000485113 USP54Q70EL1 1684 aa7.92□□□□□ -1.14
CHD1L-207ENST00000485113 ACEP12821 1306 aa7.92□□□□□ -1.14
CHD1L-207ENST00000485113 CENPJQ9HC77 1338 aaPredicted RBP7.92□□□□□ -1.14
CHD1L-207ENST00000485113 PPIP5K1Q6PFW1 1433 aa7.92□□□□□ -1.14
CHD1L-207ENST00000485113 PLEKHG3A1L390 1219 aa7.91□□□□□ -1.14
CHD1L-207ENST00000485113 BTG4Q9NY30 223 aa7.91□□□□□ -1.14
CHD1L-207ENST00000485113 CCDC9Q9Y3X0 531 aaKnown RBP7.91□□□□□ -1.14
CHD1L-207ENST00000485113 CCDC61Q9Y6R9 512 aa7.91□□□□□ -1.14
CHD1L-207ENST00000485113 RGPD2P0DJD1 1756 aa7.9□□□□□ -1.14
CHD1L-207ENST00000485113 KIAA0232Q92628 1395 aa7.9□□□□□ -1.14
CHD1L-207ENST00000485113 ONECUT3O60422 494 aaPredicted RBP7.9□□□□□ -1.14
CHD1L-207ENST00000485113 NEUROD1Q13562 356 aa7.9□□□□□ -1.14
CHD1L-207ENST00000485113 NBPF8Q3BBV2 869 aa7.9□□□□□ -1.14
CHD1L-207ENST00000485113 SEPT12Q8IYM1 358 aa7.9□□□□□ -1.14
CHD1L-207ENST00000485113 RREB1Q92766 1687 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 CAMTA1Q9Y6Y1 1673 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 SLIT3O75094 1523 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 BLMP54132 1417 aaPredicted RBP7.89□□□□□ -1.15
CHD1L-207ENST00000485113 ROCK2O75116 1388 aaKnown RBP7.89□□□□□ -1.15
CHD1L-207ENST00000485113 SRPK2P78362 688 aaKnown RBP7.89□□□□□ -1.15
CHD1L-207ENST00000485113 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 CCDC125Q86Z20 511 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 CABP2Q9NPB3 220 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 PRDM11Q9NQV5 511 aa7.89□□□□□ -1.15
CHD1L-207ENST00000485113 USP6P35125 1406 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 USP19O94966 1318 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 SPATA31A5Q5VU36 1347 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 SPATA31A7Q8IWB4 1347 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 KIF20BQ96Q89 1820 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 NUP188Q5SRE5 1749 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 LRRC37A3O60309 1634 aa7.88□□□□□ -1.15
CHD1L-207ENST00000485113 RGPD3A6NKT7 1758 aaPredicted RBP7.87□□□□□ -1.15
CHD1L-207ENST00000485113 RGPD4Q7Z3J3 1758 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 BRD4O60885 1362 aaPredicted RBP7.87□□□□□ -1.15
CHD1L-207ENST00000485113 PEAK1Q9H792 1746 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 EVC2Q86UK5 1308 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 A0A0G2JS52 829 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 ZC3H6P61129 1189 aaKnown RBP7.87□□□□□ -1.15
CHD1L-207ENST00000485113 MYT1Q01538 1121 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 CHRNA2Q15822 529 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 FAM98CQ17RN3 349 aaKnown RBP7.87□□□□□ -1.15
CHD1L-207ENST00000485113 KRT27Q7Z3Y8 459 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 ABTB2Q8N961 1025 aa7.87□□□□□ -1.15
CHD1L-207ENST00000485113 MAP2P11137 1827 aaKnown RBP7.87□□□□□ -1.15
CHD1L-207ENST00000485113 SSH2Q76I76 1423 aa7.86□□□□□ -1.15
CHD1L-207ENST00000485113 CPDO75976 1380 aa7.86□□□□□ -1.15
CHD1L-207ENST00000485113 FAM208AQ9UK61 1670 aaKnown RBP7.86□□□□□ -1.15
CHD1L-207ENST00000485113 LRP5O75197 1615 aa7.86□□□□□ -1.15
CHD1L-207ENST00000485113 CABP1Q9NZU7 370 aa7.86□□□□□ -1.15
CHD1L-207ENST00000485113 SPATA31A1Q5TZJ5 1347 aa7.85□□□□□ -1.15
CHD1L-207ENST00000485113 NLRP13Q86W25 1043 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms