RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 ATAD2Q6PL18 1390 aa26.96■■□□□ 1.91
SNX17-206ENST00000484886 ABCA3Q99758 1704 aa26.93■■□□□ 1.9
SNX17-206ENST00000484886 NUTM2GQ5VZR2 741 aa26.9■■□□□ 1.9
SNX17-206ENST00000484886 USP21Q9UK80 565 aa26.9■■□□□ 1.9
SNX17-206ENST00000484886 TMC1Q8TDI8 760 aa26.88■■□□□ 1.89
SNX17-206ENST00000484886 TESK2Q96S53 571 aa26.88■■□□□ 1.89
SNX17-206ENST00000484886 SLC24A1O60721 1099 aa26.87■■□□□ 1.89
SNX17-206ENST00000484886 ABTB2Q8N961 1025 aa26.87■■□□□ 1.89
SNX17-206ENST00000484886 QTRT2Q9H974 415 aaKnown RBP26.87■■□□□ 1.89
SNX17-206ENST00000484886 USP6P35125 1406 aa26.87■■□□□ 1.89
SNX17-206ENST00000484886 RXRBP28702 533 aa26.85■■□□□ 1.89
SNX17-206ENST00000484886 FNBP4Q8N3X1 1017 aaPredicted RBP26.85■■□□□ 1.89
SNX17-206ENST00000484886 BRD4O60885 1362 aaPredicted RBP26.84■■□□□ 1.89
SNX17-206ENST00000484886 SOCS7O14512 581 aa26.83■■□□□ 1.89
SNX17-206ENST00000484886 TMF1P82094 1093 aa26.83■■□□□ 1.89
SNX17-206ENST00000484886 ZNF692Q9BU19 519 aaPredicted RBP26.83■■□□□ 1.89
SNX17-206ENST00000484886 AKAP12Q02952 1782 aa26.83■■□□□ 1.89
SNX17-206ENST00000484886 CRYBG1Q9Y4K1 1723 aa26.82■■□□□ 1.88
SNX17-206ENST00000484886 TRPC5Q9UL62 973 aaPredicted RBP26.81■■□□□ 1.88
SNX17-206ENST00000484886 KTN1Q86UP2 1357 aaKnown RBP26.81■■□□□ 1.88
SNX17-206ENST00000484886 PHRF1Q9P1Y6 1649 aaKnown RBP26.8■■□□□ 1.88
SNX17-206ENST00000484886 PLCH1Q4KWH8 1693 aa26.79■■□□□ 1.88
SNX17-206ENST00000484886 HDGFL2Q7Z4V5 671 aaPredicted RBP26.79■■□□□ 1.88
SNX17-206ENST00000484886 NLRP13Q86W25 1043 aa26.79■■□□□ 1.88
SNX17-206ENST00000484886 PUS7Q96PZ0 661 aaKnown RBP26.79■■□□□ 1.88
SNX17-206ENST00000484886 SLC12A5Q9H2X9 1139 aa26.78■■□□□ 1.88
SNX17-206ENST00000484886 CPSF1Q10570 1443 aaKnown RBP26.78■■□□□ 1.88
SNX17-206ENST00000484886 BCL9LQ86UU0 1499 aa26.78■■□□□ 1.88
SNX17-206ENST00000484886 SLIT2O94813 1529 aa26.77■■□□□ 1.88
SNX17-206ENST00000484886 NLRP6P59044 892 aa26.77■■□□□ 1.88
SNX17-206ENST00000484886 RBM6P78332 1123 aaKnown RBP26.77■■□□□ 1.88
SNX17-206ENST00000484886 PRDM11Q9NQV5 511 aa26.77■■□□□ 1.88
SNX17-206ENST00000484886 TTC21BQ7Z4L5 1316 aa26.76■■□□□ 1.87
SNX17-206ENST00000484886 FAM83GA6ND36 823 aa26.76■■□□□ 1.87
SNX17-206ENST00000484886 UNC5CLQ8IV45 518 aa26.76■■□□□ 1.87
SNX17-206ENST00000484886 TERF2IPQ9NYB0 399 aa26.76■■□□□ 1.87
SNX17-206ENST00000484886 MON2Q7Z3U7 1717 aa26.76■■□□□ 1.87
SNX17-206ENST00000484886 ATRNO75882 1429 aa26.75■■□□□ 1.87
SNX17-206ENST00000484886 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.75■■□□□ 1.87
SNX17-206ENST00000484886 SSH2Q76I76 1423 aa26.74■■□□□ 1.87
SNX17-206ENST00000484886 COL14A1Q05707 1796 aaKnown RBP26.74■■□□□ 1.87
SNX17-206ENST00000484886 PIK3C2AO00443 1686 aa26.74■■□□□ 1.87
SNX17-206ENST00000484886 ZC3H6P61129 1189 aaKnown RBP26.74■■□□□ 1.87
SNX17-206ENST00000484886 EIF4G2P78344 907 aaKnown RBP eCLIP26.74■■□□□ 1.87
SNX17-206ENST00000484886 CDCA8Q53HL2 280 aa26.74■■□□□ 1.87
SNX17-206ENST00000484886 NWD2Q9ULI1 1742 aa26.73■■□□□ 1.87
SNX17-206ENST00000484886 NINLQ9Y2I6 1382 aa26.73■■□□□ 1.87
SNX17-206ENST00000484886 USP19O94966 1318 aa26.73■■□□□ 1.87
SNX17-206ENST00000484886 TTC21AQ8NDW8 1320 aa26.73■■□□□ 1.87
SNX17-206ENST00000484886 NRKQ7Z2Y5 1582 aa26.73■■□□□ 1.87
SNX17-206ENST00000484886 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.73■■□□□ 1.87
SNX17-206ENST00000484886 KIAA0232Q92628 1395 aa26.72■■□□□ 1.87
SNX17-206ENST00000484886 BTG4Q9NY30 223 aa26.72■■□□□ 1.87
SNX17-206ENST00000484886 CCDC9Q9Y3X0 531 aaKnown RBP26.72■■□□□ 1.87
SNX17-206ENST00000484886 CD163L1Q9NR16 1453 aa26.72■■□□□ 1.87
SNX17-206ENST00000484886 A0A1W2PP64 1363 aa26.71■■□□□ 1.87
SNX17-206ENST00000484886 CDK12Q9NYV4 1490 aaPredicted RBP26.7■■□□□ 1.87
SNX17-206ENST00000484886 CHRNA2Q15822 529 aa26.7■■□□□ 1.86
SNX17-206ENST00000484886 ZBTB7CA1YPR0 619 aa26.69■■□□□ 1.86
SNX17-206ENST00000484886 HSPA5P11021 654 aaKnown RBP26.69■■□□□ 1.86
SNX17-206ENST00000484886 GCP02774 474 aa26.68■■□□□ 1.86
SNX17-206ENST00000484886 RGS12O14924 1447 aa26.67■■□□□ 1.86
SNX17-206ENST00000484886 EDC4Q6P2E9 1401 aaKnown RBP26.67■■□□□ 1.86
SNX17-206ENST00000484886 GJD4Q96KN9 370 aaPredicted RBP26.67■■□□□ 1.86
SNX17-206ENST00000484886 POLR3GLQ9BT43 218 aa26.67■■□□□ 1.86
SNX17-206ENST00000484886 NRAPQ86VF7 1730 aa26.65■■□□□ 1.86
SNX17-206ENST00000484886 SOX12O15370 315 aa26.65■■□□□ 1.86
SNX17-206ENST00000484886 VPS72Q15906 364 aa26.65■■□□□ 1.86
SNX17-206ENST00000484886 SLIT3O75094 1523 aa26.65■■□□□ 1.86
SNX17-206ENST00000484886 NME9Q86XW9 330 aa26.64■■□□□ 1.86
SNX17-206ENST00000484886 CPDO75976 1380 aa26.62■■□□□ 1.85
SNX17-206ENST00000484886 ANKRD36BQ8N2N9 1353 aa26.62■■□□□ 1.85
SNX17-206ENST00000484886 STRN4Q9NRL3 753 aa26.62■■□□□ 1.85
SNX17-206ENST00000484886 ZRANB1Q9UGI0 708 aa26.61■■□□□ 1.85
SNX17-206ENST00000484886 GLI3P10071 1580 aa26.61■■□□□ 1.85
SNX17-206ENST00000484886 KCNH5Q8NCM2 988 aa26.6■■□□□ 1.85
SNX17-206ENST00000484886 EVA1CP58658 441 aa26.59■■□□□ 1.85
SNX17-206ENST00000484886 MYOM1P52179 1685 aa26.57■■□□□ 1.84
SNX17-206ENST00000484886 A0A0G2JS52 829 aa26.57■■□□□ 1.84
SNX17-206ENST00000484886 MYT1Q01538 1121 aa26.57■■□□□ 1.84
SNX17-206ENST00000484886 USP31Q70CQ4 1352 aa26.57■■□□□ 1.84
SNX17-206ENST00000484886 USP54Q70EL1 1684 aa26.54■■□□□ 1.84
SNX17-206ENST00000484886 LMO7Q8WWI1 1683 aa26.54■■□□□ 1.84
SNX17-206ENST00000484886 CAMTA1Q9Y6Y1 1673 aa26.54■■□□□ 1.84
SNX17-206ENST00000484886 NFAT5O94916 1531 aa26.52■■□□□ 1.84
SNX17-206ENST00000484886 SPATA31A5Q5VU36 1347 aa26.52■■□□□ 1.84
SNX17-206ENST00000484886 AATKQ6ZMQ8 1374 aa26.52■■□□□ 1.84
SNX17-206ENST00000484886 SPATA31A7Q8IWB4 1347 aa26.52■■□□□ 1.84
SNX17-206ENST00000484886 FAM98CQ17RN3 349 aaKnown RBP26.51■■□□□ 1.83
SNX17-206ENST00000484886 COG3Q96JB2 828 aa26.51■■□□□ 1.83
SNX17-206ENST00000484886 ARHGEF25Q86VW2 580 aa26.5■■□□□ 1.83
SNX17-206ENST00000484886 SEPT12Q8IYM1 358 aa26.5■■□□□ 1.83
SNX17-206ENST00000484886 USP35Q9P2H5 1018 aa26.5■■□□□ 1.83
SNX17-206ENST00000484886 OVOS2A0A0J9YW53 1432 aa26.49■■□□□ 1.83
SNX17-206ENST00000484886 OVOS2Q6IE36 1432 aa26.49■■□□□ 1.83
SNX17-206ENST00000484886 COL5A2P05997 1499 aaPredicted RBP26.49■■□□□ 1.83
SNX17-206ENST00000484886 LARP1Q6PKG0 1096 aaKnown RBP26.48■■□□□ 1.83
SNX17-206ENST00000484886 NSD3Q9BZ95 1437 aa26.48■■□□□ 1.83
SNX17-206ENST00000484886 SPATA31A1Q5TZJ5 1347 aa26.47■■□□□ 1.83
SNX17-206ENST00000484886 KIF20BQ96Q89 1820 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms