RNA–Protein interactions for RNA: ENST00000484621.1

RNF38-207, Transcript of ring finger protein 38, humanhuman

TSL 4

Gene RNF38, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-207ENST00000484621 CDK19Q9BWU1 502 aa25.49■■□□□ 1.67
RNF38-207ENST00000484621 NUDT16Q96DE0 195 aaKnown RBP25.47■■□□□ 1.67
RNF38-207ENST00000484621 ATP7BP35670 1465 aa25.46■■□□□ 1.67
RNF38-207ENST00000484621 NWD2Q9ULI1 1742 aa25.46■■□□□ 1.67
RNF38-207ENST00000484621 VPS72Q15906 364 aa25.45■■□□□ 1.66
RNF38-207ENST00000484621 NGDNQ8NEJ9 315 aaKnown RBP25.45■■□□□ 1.66
RNF38-207ENST00000484621 NRAPQ86VF7 1730 aa25.45■■□□□ 1.66
RNF38-207ENST00000484621 SF3B2Q13435 895 aaKnown RBP25.44■■□□□ 1.66
RNF38-207ENST00000484621 KRT27Q7Z3Y8 459 aa25.44■■□□□ 1.66
RNF38-207ENST00000484621 GPRASP1Q5JY77 1395 aa25.44■■□□□ 1.66
RNF38-207ENST00000484621 SRPK2P78362 688 aaKnown RBP25.43■■□□□ 1.66
RNF38-207ENST00000484621 LMOD2Q6P5Q4 547 aa25.43■■□□□ 1.66
RNF38-207ENST00000484621 TNS3Q68CZ2 1445 aa25.43■■□□□ 1.66
RNF38-207ENST00000484621 CARD11Q9BXL7 1154 aa25.42■■□□□ 1.66
RNF38-207ENST00000484621 SBNO1A3KN83 1393 aa25.42■■□□□ 1.66
RNF38-207ENST00000484621 ONECUT3O60422 494 aaPredicted RBP25.41■■□□□ 1.66
RNF38-207ENST00000484621 FAM182BQ5T319 152 aa25.41■■□□□ 1.66
RNF38-207ENST00000484621 CCDC9Q9Y3X0 531 aaKnown RBP25.41■■□□□ 1.66
RNF38-207ENST00000484621 TOPAZ1Q8N9V7 1692 aa25.41■■□□□ 1.66
RNF38-207ENST00000484621 TRPM3Q9HCF6 1732 aaPredicted RBP25.4■■□□□ 1.66
RNF38-207ENST00000484621 CCDC61Q9Y6R9 512 aa25.39■■□□□ 1.66
RNF38-207ENST00000484621 CABP2Q9NPB3 220 aa25.38■■□□□ 1.65
RNF38-207ENST00000484621 ARHGEF10O15013 1369 aa25.38■■□□□ 1.65
RNF38-207ENST00000484621 TNS1Q9HBL0 1735 aaKnown RBP25.37■■□□□ 1.65
RNF38-207ENST00000484621 EN1Q05925 392 aaPredicted RBP25.37■■□□□ 1.65
RNF38-207ENST00000484621 EVC2Q86UK5 1308 aa25.37■■□□□ 1.65
RNF38-207ENST00000484621 CLSPNQ9HAW4 1339 aa25.37■■□□□ 1.65
RNF38-207ENST00000484621 FAM83GA6ND36 823 aa25.36■■□□□ 1.65
RNF38-207ENST00000484621 HAP1P54257 671 aaPredicted RBP25.36■■□□□ 1.65
RNF38-207ENST00000484621 RGPD1P0DJD0 1748 aa25.35■■□□□ 1.65
RNF38-207ENST00000484621 PAK3O75914 559 aaPredicted RBP25.35■■□□□ 1.65
RNF38-207ENST00000484621 ALS2Q96Q42 1657 aa25.34■■□□□ 1.65
RNF38-207ENST00000484621 BAG6P46379 1132 aa25.34■■□□□ 1.65
RNF38-207ENST00000484621 R3HDM1Q15032 1099 aaKnown RBP25.34■■□□□ 1.65
RNF38-207ENST00000484621 FAM98CQ17RN3 349 aaKnown RBP25.34■■□□□ 1.65
RNF38-207ENST00000484621 A0A0G2JS52 829 aa25.33■■□□□ 1.65
RNF38-207ENST00000484621 MYT1Q01538 1121 aa25.33■■□□□ 1.65
RNF38-207ENST00000484621 ACEP12821 1306 aa25.33■■□□□ 1.64
RNF38-207ENST00000484621 PPIP5K1Q6PFW1 1433 aa25.32■■□□□ 1.64
RNF38-207ENST00000484621 PLEKHG3A1L390 1219 aa25.32■■□□□ 1.64
RNF38-207ENST00000484621 CCER1Q8TC90 406 aaPredicted RBP25.32■■□□□ 1.64
RNF38-207ENST00000484621 POLR3AO14802 1390 aaPredicted RBP25.31■■□□□ 1.64
RNF38-207ENST00000484621 THSD7AQ9UPZ6 1657 aa25.29■■□□□ 1.64
RNF38-207ENST00000484621 TIMELESSQ9UNS1 1208 aa25.27■■□□□ 1.64
RNF38-207ENST00000484621 CABP1Q9NZU7 370 aa25.26■■□□□ 1.63
RNF38-207ENST00000484621 CRYBG1Q9Y4K1 1723 aa25.26■■□□□ 1.63
RNF38-207ENST00000484621 EZH2Q15910 746 aaKnown RBP25.25■■□□□ 1.63
RNF38-207ENST00000484621 BTG4Q9NY30 223 aa25.25■■□□□ 1.63
RNF38-207ENST00000484621 SBNO2Q9Y2G9 1366 aa25.25■■□□□ 1.63
RNF38-207ENST00000484621 COL14A1Q05707 1796 aaKnown RBP25.23■■□□□ 1.63
RNF38-207ENST00000484621 DISP2A7MBM2 1401 aa25.23■■□□□ 1.63
RNF38-207ENST00000484621 NUTM2GQ5VZR2 741 aa25.2■■□□□ 1.62
RNF38-207ENST00000484621 SPATA31A5Q5VU36 1347 aa25.18■■□□□ 1.62
RNF38-207ENST00000484621 SPATA31A7Q8IWB4 1347 aa25.18■■□□□ 1.62
RNF38-207ENST00000484621 ST20-MTHFSA0A0A6YYL1 179 aa25.18■■□□□ 1.62
RNF38-207ENST00000484621 ABTB2Q8N961 1025 aa25.18■■□□□ 1.62
RNF38-207ENST00000484621 AKAP12Q02952 1782 aa25.17■■□□□ 1.62
RNF38-207ENST00000484621 RREB1Q92766 1687 aa25.17■■□□□ 1.62
RNF38-207ENST00000484621 PHRF1Q9P1Y6 1649 aaKnown RBP25.16■■□□□ 1.62
RNF38-207ENST00000484621 USP6P35125 1406 aa25.16■■□□□ 1.62
RNF38-207ENST00000484621 NUP188Q5SRE5 1749 aa25.16■■□□□ 1.62
RNF38-207ENST00000484621 CAMKK2Q96RR4 588 aa25.16■■□□□ 1.62
RNF38-207ENST00000484621 BRD4O60885 1362 aaPredicted RBP25.16■■□□□ 1.62
RNF38-207ENST00000484621 USP47Q96K76 1375 aa25.14■■□□□ 1.61
RNF38-207ENST00000484621 TRIM37O94972 964 aa25.13■■□□□ 1.61
RNF38-207ENST00000484621 ZNF692Q9BU19 519 aaPredicted RBP25.13■■□□□ 1.61
RNF38-207ENST00000484621 YY1P25490 414 aa25.12■■□□□ 1.61
RNF38-207ENST00000484621 TMC1Q8TDI8 760 aa25.12■■□□□ 1.61
RNF38-207ENST00000484621 TESK2Q96S53 571 aa25.12■■□□□ 1.61
RNF38-207ENST00000484621 SLC24A1O60721 1099 aa25.11■■□□□ 1.61
RNF38-207ENST00000484621 NLRP13Q86W25 1043 aa25.11■■□□□ 1.61
RNF38-207ENST00000484621 PRDM11Q9NQV5 511 aa25.11■■□□□ 1.61
RNF38-207ENST00000484621 ZC3H6P61129 1189 aaKnown RBP25.09■■□□□ 1.61
RNF38-207ENST00000484621 KTN1Q86UP2 1357 aaKnown RBP25.08■■□□□ 1.61
RNF38-207ENST00000484621 CPSF1Q10570 1443 aaKnown RBP25.08■■□□□ 1.61
RNF38-207ENST00000484621 CAMTA1Q9Y6Y1 1673 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 KIAA0232Q92628 1395 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 MON2Q7Z3U7 1717 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 SSH2Q76I76 1423 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 NLRP6P59044 892 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 PUS7Q96PZ0 661 aaKnown RBP25.07■■□□□ 1.6
RNF38-207ENST00000484621 SPATA31A1Q5TZJ5 1347 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 PIK3C2AO00443 1686 aa25.07■■□□□ 1.6
RNF38-207ENST00000484621 NRKQ7Z2Y5 1582 aa25.06■■□□□ 1.6
RNF38-207ENST00000484621 CHRNA2Q15822 529 aa25.06■■□□□ 1.6
RNF38-207ENST00000484621 USP19O94966 1318 aa25.06■■□□□ 1.6
RNF38-207ENST00000484621 TTC21BQ7Z4L5 1316 aa25.06■■□□□ 1.6
RNF38-207ENST00000484621 HDGFL2Q7Z4V5 671 aaPredicted RBP25.05■■□□□ 1.6
RNF38-207ENST00000484621 SLC12A5Q9H2X9 1139 aa25.05■■□□□ 1.6
RNF38-207ENST00000484621 APBA3O96018 575 aa25.04■■□□□ 1.6
RNF38-207ENST00000484621 TMF1P82094 1093 aa25.04■■□□□ 1.6
RNF38-207ENST00000484621 TTC21AQ8NDW8 1320 aa25.04■■□□□ 1.6
RNF38-207ENST00000484621 GCP02774 474 aa25.03■■□□□ 1.6
RNF38-207ENST00000484621 TERF2IPQ9NYB0 399 aa25.02■■□□□ 1.6
RNF38-207ENST00000484621 STRN4Q9NRL3 753 aa25.01■■□□□ 1.59
RNF38-207ENST00000484621 CD163L1Q9NR16 1453 aa25.01■■□□□ 1.59
RNF38-207ENST00000484621 FAM196AQ6ZSG2 479 aa24.99■■□□□ 1.59
RNF38-207ENST00000484621 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.99■■□□□ 1.59
RNF38-207ENST00000484621 NINLQ9Y2I6 1382 aa24.99■■□□□ 1.59
RNF38-207ENST00000484621 SLIT3O75094 1523 aa24.98■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms