RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 AKAP12Q02952 1782 aa16.46■□□□□ 0.22
CDK5RAP2-217ENST00000484546 PLEKHG5O94827 1062 aa16.44■□□□□ 0.22
CDK5RAP2-217ENST00000484546 CABLES1Q8TDN4 633 aa16.44■□□□□ 0.22
CDK5RAP2-217ENST00000484546 CABP1Q9NZU7 370 aa16.44■□□□□ 0.22
CDK5RAP2-217ENST00000484546 PHRF1Q9P1Y6 1649 aaKnown RBP16.44■□□□□ 0.22
CDK5RAP2-217ENST00000484546 USP6P35125 1406 aa16.44■□□□□ 0.22
CDK5RAP2-217ENST00000484546 TMF1P82094 1093 aa16.43■□□□□ 0.22
CDK5RAP2-217ENST00000484546 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
CDK5RAP2-217ENST00000484546 TESK2Q96S53 571 aa16.43■□□□□ 0.22
CDK5RAP2-217ENST00000484546 NRKQ7Z2Y5 1582 aa16.43■□□□□ 0.22
CDK5RAP2-217ENST00000484546 TMC1Q8TDI8 760 aa16.42■□□□□ 0.22
CDK5RAP2-217ENST00000484546 PLCH1Q4KWH8 1693 aa16.42■□□□□ 0.22
CDK5RAP2-217ENST00000484546 MON2Q7Z3U7 1717 aa16.42■□□□□ 0.22
CDK5RAP2-217ENST00000484546 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.42■□□□□ 0.22
CDK5RAP2-217ENST00000484546 FNBP4Q8N3X1 1017 aaPredicted RBP16.41■□□□□ 0.22
CDK5RAP2-217ENST00000484546 SLIT2O94813 1529 aa16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 BRD4O60885 1362 aaPredicted RBP16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 SSH2Q76I76 1423 aa16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 EIF4G2P78344 907 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 CDCA8Q53HL2 280 aa16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 BCL9LQ86UU0 1499 aa16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 PIK3C2AO00443 1686 aa16.4■□□□□ 0.22
CDK5RAP2-217ENST00000484546 NWD2Q9ULI1 1742 aa16.39■□□□□ 0.21
CDK5RAP2-217ENST00000484546 ATRNO75882 1429 aa16.39■□□□□ 0.21
CDK5RAP2-217ENST00000484546 CPSF1Q10570 1443 aaKnown RBP16.39■□□□□ 0.21
CDK5RAP2-217ENST00000484546 SOCS7O14512 581 aa16.39■□□□□ 0.21
CDK5RAP2-217ENST00000484546 USP21Q9UK80 565 aa16.39■□□□□ 0.21
CDK5RAP2-217ENST00000484546 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
CDK5RAP2-217ENST00000484546 ZNF692Q9BU19 519 aaPredicted RBP16.38■□□□□ 0.21
CDK5RAP2-217ENST00000484546 COL14A1Q05707 1796 aaKnown RBP16.38■□□□□ 0.21
CDK5RAP2-217ENST00000484546 CDK12Q9NYV4 1490 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP2-217ENST00000484546 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
CDK5RAP2-217ENST00000484546 NUTM2GQ5VZR2 741 aa16.37■□□□□ 0.21
CDK5RAP2-217ENST00000484546 HDGFL2Q7Z4V5 671 aaPredicted RBP16.37■□□□□ 0.21
CDK5RAP2-217ENST00000484546 PUS7Q96PZ0 661 aaKnown RBP16.37■□□□□ 0.21
CDK5RAP2-217ENST00000484546 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
CDK5RAP2-217ENST00000484546 USP19O94966 1318 aa16.36■□□□□ 0.21
CDK5RAP2-217ENST00000484546 RXRBP28702 533 aa16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 QTRT2Q9H974 415 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 TERF2IPQ9NYB0 399 aa16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 TRPC5Q9UL62 973 aaPredicted RBP16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 KTN1Q86UP2 1357 aaKnown RBP16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 NINLQ9Y2I6 1382 aa16.35■□□□□ 0.21
CDK5RAP2-217ENST00000484546 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
CDK5RAP2-217ENST00000484546 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
CDK5RAP2-217ENST00000484546 RGS12O14924 1447 aa16.34■□□□□ 0.21
CDK5RAP2-217ENST00000484546 SLIT3O75094 1523 aa16.34■□□□□ 0.21
CDK5RAP2-217ENST00000484546 HSPA5P11021 654 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP2-217ENST00000484546 RBM6P78332 1123 aaKnown RBP16.33■□□□□ 0.2
CDK5RAP2-217ENST00000484546 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
CDK5RAP2-217ENST00000484546 FAM83GA6ND36 823 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 GLI3P10071 1580 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 USP54Q70EL1 1684 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 NLRP13Q86W25 1043 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 UNC5CLQ8IV45 518 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 KIAA0232Q92628 1395 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 SLC12A5Q9H2X9 1139 aa16.32■□□□□ 0.2
CDK5RAP2-217ENST00000484546 MYOM1P52179 1685 aa16.31■□□□□ 0.2
CDK5RAP2-217ENST00000484546 TTC21AQ8NDW8 1320 aa16.31■□□□□ 0.2
CDK5RAP2-217ENST00000484546 EDC4Q6P2E9 1401 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP2-217ENST00000484546 PRDM11Q9NQV5 511 aa16.3■□□□□ 0.2
CDK5RAP2-217ENST00000484546 LMO7Q8WWI1 1683 aa16.3■□□□□ 0.2
CDK5RAP2-217ENST00000484546 CPDO75976 1380 aa16.29■□□□□ 0.2
CDK5RAP2-217ENST00000484546 NLRP6P59044 892 aa16.29■□□□□ 0.2
CDK5RAP2-217ENST00000484546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.29■□□□□ 0.2
CDK5RAP2-217ENST00000484546 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
CDK5RAP2-217ENST00000484546 ANKRD36BQ8N2N9 1353 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 GCP02774 474 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 CHRNA2Q15822 529 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 VPS72Q15906 364 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 GJD4Q96KN9 370 aaPredicted RBP16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 BTG4Q9NY30 223 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 NFAT5O94916 1531 aa16.27■□□□□ 0.2
CDK5RAP2-217ENST00000484546 USP31Q70CQ4 1352 aa16.26■□□□□ 0.19
CDK5RAP2-217ENST00000484546 ZBTB7CA1YPR0 619 aa16.25■□□□□ 0.19
CDK5RAP2-217ENST00000484546 NME9Q86XW9 330 aa16.25■□□□□ 0.19
CDK5RAP2-217ENST00000484546 CAMTA1Q9Y6Y1 1673 aa16.24■□□□□ 0.19
CDK5RAP2-217ENST00000484546 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
CDK5RAP2-217ENST00000484546 OVOS2A0A0J9YW53 1432 aa16.24■□□□□ 0.19
CDK5RAP2-217ENST00000484546 OVOS2Q6IE36 1432 aa16.24■□□□□ 0.19
CDK5RAP2-217ENST00000484546 SOX12O15370 315 aa16.23■□□□□ 0.19
CDK5RAP2-217ENST00000484546 ZRANB1Q9UGI0 708 aa16.23■□□□□ 0.19
CDK5RAP2-217ENST00000484546 COL18A1P39060 1754 aa16.23■□□□□ 0.19
CDK5RAP2-217ENST00000484546 KCNH5Q8NCM2 988 aa16.22■□□□□ 0.19
CDK5RAP2-217ENST00000484546 COL5A2P05997 1499 aaPredicted RBP16.22■□□□□ 0.19
CDK5RAP2-217ENST00000484546 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
CDK5RAP2-217ENST00000484546 ABCC6O95255 1503 aa16.2■□□□□ 0.18
CDK5RAP2-217ENST00000484546 KIF20BQ96Q89 1820 aa16.2■□□□□ 0.18
CDK5RAP2-217ENST00000484546 SPATA31A5Q5VU36 1347 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 SPATA31A7Q8IWB4 1347 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 BRWD3Q6RI45 1802 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 LTN1O94822 1766 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 THSD7AQ9UPZ6 1657 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 COG3Q96JB2 828 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 STRN4Q9NRL3 753 aa16.19■□□□□ 0.18
CDK5RAP2-217ENST00000484546 EVA1CP58658 441 aa16.18■□□□□ 0.18
CDK5RAP2-217ENST00000484546 ARHGEF25Q86VW2 580 aa16.18■□□□□ 0.18
CDK5RAP2-217ENST00000484546 RGPD5Q99666 1765 aa16.17■□□□□ 0.18
CDK5RAP2-217ENST00000484546 NSD3Q9BZ95 1437 aa16.17■□□□□ 0.18
CDK5RAP2-217ENST00000484546 SPATA31A1Q5TZJ5 1347 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms