RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 TMEM94Q12767 1356 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 ATP7BP35670 1465 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 KIF1AQ12756 1690 aa8.93□□□□□ -0.98
PDZRN3-209ENST00000484487 KIF20BQ96Q89 1820 aa8.92□□□□□ -0.98
PDZRN3-209ENST00000484487 ATF3P18847 181 aa8.92□□□□□ -0.98
PDZRN3-209ENST00000484487 ANKRD26Q9UPS8 1709 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 PPIP5K1Q6PFW1 1433 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 ANKRD36BQ8N2N9 1353 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 HDGFL2Q7Z4V5 671 aaPredicted RBP8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 CADPS2Q86UW7 1296 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 PANK3Q9H999 370 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 LTBP4Q8N2S1 1624 aa8.91□□□□□ -0.98
PDZRN3-209ENST00000484487 SLC12A5Q9H2X9 1139 aa8.9□□□□□ -0.98
PDZRN3-209ENST00000484487 KNSTRNQ9Y448 316 aa8.9□□□□□ -0.98
PDZRN3-209ENST00000484487 PLEKHG3A1L390 1219 aa8.89□□□□□ -0.99
PDZRN3-209ENST00000484487 RBM33Q96EV2 1170 aaKnown RBP8.89□□□□□ -0.99
PDZRN3-209ENST00000484487 CABP1Q9NZU7 370 aa8.89□□□□□ -0.99
PDZRN3-209ENST00000484487 KTN1Q86UP2 1357 aaKnown RBP8.88□□□□□ -0.99
PDZRN3-209ENST00000484487 PRR36Q9H6K5 1346 aa8.88□□□□□ -0.99
PDZRN3-209ENST00000484487 ANP32CO43423 234 aa8.88□□□□□ -0.99
PDZRN3-209ENST00000484487 IQSEC2Q5JU85 1478 aa8.88□□□□□ -0.99
PDZRN3-209ENST00000484487 BRD4O60885 1362 aaPredicted RBP8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 NPC1L1Q9UHC9 1359 aa8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 NUTM2FA1L443 756 aa8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 NGDNQ8NEJ9 315 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 MST1RQ04912 1400 aa8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 CPSF1Q10570 1443 aaKnown RBP8.87□□□□□ -0.99
PDZRN3-209ENST00000484487 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 POLR3AO14802 1390 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 NSD2O96028 1365 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 NRKQ7Z2Y5 1582 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 ACEP12821 1306 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 CGNL1Q0VF96 1302 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 C1orf167Q5SNV9 1468 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 CD163L1Q9NR16 1453 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 PER1O15534 1290 aaPredicted RBP8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 ESCO1Q5FWF5 840 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 FBXO41Q8TF61 875 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 PHF8Q9UPP1 1060 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 EDC4Q6P2E9 1401 aaKnown RBP8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 NSD3Q9BZ95 1437 aa8.86□□□□□ -0.99
PDZRN3-209ENST00000484487 MAP2P11137 1827 aaKnown RBP8.85□□□□□ -0.99
PDZRN3-209ENST00000484487 RALBP1Q15311 655 aa8.85□□□□□ -0.99
PDZRN3-209ENST00000484487 USP6P35125 1406 aa8.84□□□□□ -0.99
PDZRN3-209ENST00000484487 PMFBP1Q8TBY8 1022 aa8.84□□□□□ -0.99
PDZRN3-209ENST00000484487 CARD14Q9BXL6 1004 aa8.84□□□□□ -0.99
PDZRN3-209ENST00000484487 SLAIN2Q9P270 581 aa8.84□□□□□ -0.99
PDZRN3-209ENST00000484487 USP54Q70EL1 1684 aa8.84□□□□□ -0.99
PDZRN3-209ENST00000484487 NHSL1Q5SYE7 1610 aa8.83□□□□□ -1
PDZRN3-209ENST00000484487 TTC21AQ8NDW8 1320 aa8.83□□□□□ -1
PDZRN3-209ENST00000484487 PSME1Q06323 249 aa8.83□□□□□ -1
PDZRN3-209ENST00000484487 AMER1Q5JTC6 1135 aaPredicted RBP8.83□□□□□ -1
PDZRN3-209ENST00000484487 SP7Q8TDD2 431 aaPredicted RBP8.83□□□□□ -1
PDZRN3-209ENST00000484487 PRKRIP1Q9H875 184 aaPredicted RBP8.83□□□□□ -1
PDZRN3-209ENST00000484487 TRPM3Q9HCF6 1732 aaPredicted RBP8.83□□□□□ -1
PDZRN3-209ENST00000484487 TOM1O60784 492 aa8.82□□□□□ -1
PDZRN3-209ENST00000484487 ORAI2Q96SN7 254 aa8.82□□□□□ -1
PDZRN3-209ENST00000484487 ROBO1Q9Y6N7 1651 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 NPHP3Q7Z494 1330 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 TTC21BQ7Z4L5 1316 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 FKBP8Q14318 412 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 CC2D1BQ5T0F9 858 aaKnown RBP8.81□□□□□ -1
PDZRN3-209ENST00000484487 PARD3Q8TEW0 1356 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 PIK3C2AO00443 1686 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 ALS2Q96Q42 1657 aa8.81□□□□□ -1
PDZRN3-209ENST00000484487 SSH2Q76I76 1423 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 CCER2I3L3R5 266 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 FYB1O15117 783 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 FOXO3O43524 673 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 EVX2Q03828 476 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 KRT28Q7Z3Y7 464 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 MORC1Q86VD1 984 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
PDZRN3-209ENST00000484487 MIER1Q8N108 512 aa8.8□□□□□ -1
PDZRN3-209ENST00000484487 MARF1Q9Y4F3 1742 aaKnown RBP8.8□□□□□ -1
PDZRN3-209ENST00000484487 MYBBP1AQ9BQG0 1328 aaKnown RBP8.8□□□□□ -1
PDZRN3-209ENST00000484487 SBNO1A3KN83 1393 aa8.79□□□□□ -1
PDZRN3-209ENST00000484487 PAK3O75914 559 aaPredicted RBP8.79□□□□□ -1
PDZRN3-209ENST00000484487 BRINP3Q76B58 766 aa8.79□□□□□ -1
PDZRN3-209ENST00000484487 CERKQ8TCT0 537 aa8.79□□□□□ -1
PDZRN3-209ENST00000484487 COG3Q96JB2 828 aa8.79□□□□□ -1
PDZRN3-209ENST00000484487 FARP1Q9Y4F1 1045 aaPredicted RBP8.79□□□□□ -1
PDZRN3-209ENST00000484487 PHLPP1O60346 1717 aa8.79□□□□□ -1
PDZRN3-209ENST00000484487 USP31Q70CQ4 1352 aa8.78□□□□□ -1
PDZRN3-209ENST00000484487 CNGB1Q14028 1251 aaPredicted RBP8.78□□□□□ -1
PDZRN3-209ENST00000484487 CREBZFQ9NS37 354 aa8.78□□□□□ -1
PDZRN3-209ENST00000484487 AHDC1Q5TGY3 1603 aaPredicted RBP8.78□□□□□ -1
PDZRN3-209ENST00000484487 LTN1O94822 1766 aa8.78□□□□□ -1
PDZRN3-209ENST00000484487 PXDNQ92626 1479 aa8.77□□□□□ -1
PDZRN3-209ENST00000484487 NLRP13Q86W25 1043 aa8.77□□□□□ -1.01
PDZRN3-209ENST00000484487 NME9Q86XW9 330 aa8.77□□□□□ -1.01
PDZRN3-209ENST00000484487 PROM2Q8N271 834 aa8.77□□□□□ -1.01
PDZRN3-209ENST00000484487 ABTB2Q8N961 1025 aa8.77□□□□□ -1.01
PDZRN3-209ENST00000484487 GGNBP2Q9H3C7 697 aa8.77□□□□□ -1.01
PDZRN3-209ENST00000484487 ARHGEF10O15013 1369 aa8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 C19orf67A6NJJ6 358 aa8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 UBAP1LF5GYI3 381 aa8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 NLRP6P59044 892 aa8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 OVOS2A0A0J9YW53 1432 aa8.76□□□□□ -1.01
PDZRN3-209ENST00000484487 OVOS2Q6IE36 1432 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms