RNA–Protein interactions for RNA: ENST00000483956.1

SEC61A1-205, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 1 (best)

Gene SEC61A1, Length 3,046 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-205ENST00000483956 ADGRL1O94910 1474 aa14.51□□□□□ -0.09
SEC61A1-205ENST00000483956 PPP4R3BQ5MIZ7 849 aa14.51□□□□□ -0.09
SEC61A1-205ENST00000483956 DDX11L8A8MPP1 907 aa14.5□□□□□ -0.09
SEC61A1-205ENST00000483956 PCDHB15Q9Y5E8 787 aa14.5□□□□□ -0.09
SEC61A1-205ENST00000483956 ADGRB2O60241 1585 aa14.5□□□□□ -0.09
SEC61A1-205ENST00000483956 CCDC173Q0VFZ6 552 aa14.5□□□□□ -0.09
SEC61A1-205ENST00000483956 MORC1Q86VD1 984 aa14.5□□□□□ -0.09
SEC61A1-205ENST00000483956 TCP11L2Q8N4U5 519 aa14.49□□□□□ -0.09
SEC61A1-205ENST00000483956 PPLO60437 1756 aa14.49□□□□□ -0.09
SEC61A1-205ENST00000483956 TAF7LQ5H9L4 462 aa14.49□□□□□ -0.09
SEC61A1-205ENST00000483956 MTERF4Q7Z6M4 381 aaKnown RBP14.49□□□□□ -0.09
SEC61A1-205ENST00000483956 ADGRB1O14514 1584 aa14.48□□□□□ -0.09
SEC61A1-205ENST00000483956 RLBP1P12271 317 aa14.48□□□□□ -0.09
SEC61A1-205ENST00000483956 KIF3BO15066 747 aa14.48□□□□□ -0.09
SEC61A1-205ENST00000483956 PPP1R9BQ96SB3 815 aa14.48□□□□□ -0.09
SEC61A1-205ENST00000483956 RWDD1Q9H446 243 aaPredicted RBP14.48□□□□□ -0.09
SEC61A1-205ENST00000483956 NCLP19338 710 aaKnown RBP14.47□□□□□ -0.09
SEC61A1-205ENST00000483956 PDZRN3Q9UPQ7 1066 aa14.47□□□□□ -0.09
SEC61A1-205ENST00000483956 IPO4Q8TEX9 1081 aaKnown RBP14.47□□□□□ -0.09
SEC61A1-205ENST00000483956 TMEM51Q9NW97 253 aa14.47□□□□□ -0.09
SEC61A1-205ENST00000483956 NOS1P29475 1434 aa14.46□□□□□ -0.09
SEC61A1-205ENST00000483956 XPCQ01831 940 aaPredicted RBP14.46□□□□□ -0.1
SEC61A1-205ENST00000483956 ANP32BQ92688 251 aaKnown RBP14.46□□□□□ -0.1
SEC61A1-205ENST00000483956 NSD2O96028 1365 aa14.46□□□□□ -0.1
SEC61A1-205ENST00000483956 CT47B1P0C2W7 299 aaPredicted RBP14.45□□□□□ -0.1
SEC61A1-205ENST00000483956 NASPP49321 788 aaPredicted RBP14.45□□□□□ -0.1
SEC61A1-205ENST00000483956 CCDC94Q9BW85 323 aaPredicted RBP14.45□□□□□ -0.1
SEC61A1-205ENST00000483956 DYNC1I1O14576 645 aa14.45□□□□□ -0.1
SEC61A1-205ENST00000483956 VGLL3A8MV65 326 aa14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 RRP7AQ9Y3A4 280 aaKnown RBP14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 MVPQ14764 893 aaKnown RBP14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 CFAP53Q96M91 514 aa14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 PUS7Q96PZ0 661 aaKnown RBP14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 KIDINS220Q9ULH0 1771 aa14.44□□□□□ -0.1
SEC61A1-205ENST00000483956 TNNT2P45379 298 aaPredicted RBP14.43□□□□□ -0.1
SEC61A1-205ENST00000483956 NEUROD2Q15784 382 aa14.43□□□□□ -0.1
SEC61A1-205ENST00000483956 TNNQ9UQP3 1299 aa14.43□□□□□ -0.1
SEC61A1-205ENST00000483956 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
SEC61A1-205ENST00000483956 ZNF692Q9BU19 519 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-205ENST00000483956 MTHFSP49914 203 aa14.42□□□□□ -0.1
SEC61A1-205ENST00000483956 PAXIP1Q6ZW49 1069 aaPredicted RBP14.42□□□□□ -0.1
SEC61A1-205ENST00000483956 SLC12A5Q9H2X9 1139 aa14.42□□□□□ -0.1
SEC61A1-205ENST00000483956 ZKSCAN2Q63HK3 967 aa14.41□□□□□ -0.1
SEC61A1-205ENST00000483956 PLCD3Q8N3E9 789 aa14.41□□□□□ -0.1
SEC61A1-205ENST00000483956 ZNF830Q96NB3 372 aaPredicted RBP14.41□□□□□ -0.1
SEC61A1-205ENST00000483956 ANKRD36BQ8N2N9 1353 aa14.41□□□□□ -0.1
SEC61A1-205ENST00000483956 BCL2L13Q9BXK5 485 aa14.4□□□□□ -0.1
SEC61A1-205ENST00000483956 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
SEC61A1-205ENST00000483956 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.4□□□□□ -0.1
SEC61A1-205ENST00000483956 ARHGEF28Q8N1W1 1705 aaKnown RBP14.4□□□□□ -0.1
SEC61A1-205ENST00000483956 GLI2P10070 1586 aa14.4□□□□□ -0.1
SEC61A1-205ENST00000483956 ZNF500O60304 480 aaPredicted RBP14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 KIF20AO95235 890 aa14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 DZIP1LQ8IYY4 767 aaKnown RBP14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 TNPO1Q92973 898 aaKnown RBP14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 TULP4Q9NRJ4 1543 aa14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 RPGRIP1LQ68CZ1 1315 aa14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 TRAK1Q9UPV9 953 aa14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 CBX1P83916 185 aa14.39□□□□□ -0.11
SEC61A1-205ENST00000483956 GTPBP4Q9BZE4 634 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-205ENST00000483956 NOL7Q9UMY1 257 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-205ENST00000483956 FTSJ3Q8IY81 847 aaKnown RBP14.38□□□□□ -0.11
SEC61A1-205ENST00000483956 C22orf23Q9BZE7 217 aa14.37□□□□□ -0.11
SEC61A1-205ENST00000483956 NPATQ14207 1427 aa14.37□□□□□ -0.11
SEC61A1-205ENST00000483956 HECW2Q9P2P5 1572 aa14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 SASS6Q6UVJ0 657 aa14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 JARID2Q92833 1246 aaPredicted RBP14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 COL3A1P02461 1466 aaPredicted RBP14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 NCOA3Q9Y6Q9 1424 aa14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 DDX19BQ9UMR2 479 aa14.36□□□□□ -0.11
SEC61A1-205ENST00000483956 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 ABCC11Q96J66 1382 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 IL16Q14005 1332 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 EVC2Q86UK5 1308 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 CD109Q6YHK3 1445 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 ZBTB22O15209 634 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 U2AF1L5P0DN76 240 aaPredicted RBP14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 U2AF1Q01081 240 aaKnown RBP eCLIP14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 SMC5Q8IY18 1101 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
SEC61A1-205ENST00000483956 HSCBQ8IWL3 235 aa14.34□□□□□ -0.11
SEC61A1-205ENST00000483956 GBP4Q96PP9 640 aa14.34□□□□□ -0.11
SEC61A1-205ENST00000483956 PIK3C2BO00750 1634 aa14.34□□□□□ -0.11
SEC61A1-205ENST00000483956 TRIM27P14373 513 aa14.34□□□□□ -0.11
SEC61A1-205ENST00000483956 DDIT3P35638 169 aa14.34□□□□□ -0.11
SEC61A1-205ENST00000483956 MFAP1P55081 439 aaKnown RBP14.33□□□□□ -0.11
SEC61A1-205ENST00000483956 HS1BP3Q53T59 392 aa14.33□□□□□ -0.11
SEC61A1-205ENST00000483956 TSC1Q92574 1164 aa14.33□□□□□ -0.11
SEC61A1-205ENST00000483956 PLEKHF1Q96S99 279 aa14.33□□□□□ -0.11
SEC61A1-205ENST00000483956 FRMPD1Q5SYB0 1578 aa14.33□□□□□ -0.11
SEC61A1-205ENST00000483956 SMC4Q9NTJ3 1288 aa14.33□□□□□ -0.12
SEC61A1-205ENST00000483956 CAMSAP1Q5T5Y3 1602 aa14.33□□□□□ -0.12
SEC61A1-205ENST00000483956 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
SEC61A1-205ENST00000483956 ATF7IPQ6VMQ6 1270 aa14.33□□□□□ -0.12
SEC61A1-205ENST00000483956 MED14O60244 1454 aa14.32□□□□□ -0.12
SEC61A1-205ENST00000483956 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 ATP2B3Q16720 1220 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 TMEM132EQ6IEE7 984 aa14.31□□□□□ -0.12
SEC61A1-205ENST00000483956 SSH1Q8WYL5 1049 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms