RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 ADH1CP00326 375 aa7.07□□□□□ -1.28
PKP4-212ENST00000483881 OATP04181 439 aa7.07□□□□□ -1.28
PKP4-212ENST00000483881 SH3BP2P78314 561 aa7.07□□□□□ -1.28
PKP4-212ENST00000483881 Q3C1V9 767 aa7.06□□□□□ -1.28
PKP4-212ENST00000483881 SOS2Q07890 1332 aaPredicted RBP7.05□□□□□ -1.28
PKP4-212ENST00000483881 PHF20L1A8MW92 1017 aa7.05□□□□□ -1.28
PKP4-212ENST00000483881 SPRYD3Q8NCJ5 442 aa7.05□□□□□ -1.28
PKP4-212ENST00000483881 DAXXQ9UER7 740 aaPredicted RBP7.05□□□□□ -1.28
PKP4-212ENST00000483881 ADAMTS2O95450 1211 aa7.04□□□□□ -1.28
PKP4-212ENST00000483881 METTL3Q86U44 580 aaKnown RBP7.04□□□□□ -1.28
PKP4-212ENST00000483881 CELA2BP08218 269 aaPredicted RBP7.03□□□□□ -1.28
PKP4-212ENST00000483881 MAP3K10Q02779 954 aa7.03□□□□□ -1.28
PKP4-212ENST00000483881 PTSQ03393 145 aa7.03□□□□□ -1.28
PKP4-212ENST00000483881 ZFAND3Q9H8U3 227 aa7.03□□□□□ -1.28
PKP4-212ENST00000483881 BMP2P12643 396 aa7.02□□□□□ -1.29
PKP4-212ENST00000483881 ITGB7P26010 798 aa7.02□□□□□ -1.29
PKP4-212ENST00000483881 MLLT3P42568 568 aaPredicted RBP7.02□□□□□ -1.29
PKP4-212ENST00000483881 LCE1DQ5T752 114 aa7.02□□□□□ -1.29
PKP4-212ENST00000483881 VWA5B2Q8N398 1253 aa7.02□□□□□ -1.29
PKP4-212ENST00000483881 PLEKHG3A1L390 1219 aa7.01□□□□□ -1.29
PKP4-212ENST00000483881 GRIPAP1Q4V328 841 aa7.01□□□□□ -1.29
PKP4-212ENST00000483881 MPNDQ8N594 471 aa7.01□□□□□ -1.29
PKP4-212ENST00000483881 BEND7Q8N7W2 519 aaPredicted RBP7.01□□□□□ -1.29
PKP4-212ENST00000483881 ZIC2O95409 532 aaPredicted RBP7□□□□□ -1.29
PKP4-212ENST00000483881 CCDC155Q8N6L0 562 aa7□□□□□ -1.29
PKP4-212ENST00000483881 GOLGA2P5Q9HBQ8 144 aa7□□□□□ -1.29
PKP4-212ENST00000483881 ITPKCQ96DU7 683 aa6.99□□□□□ -1.29
PKP4-212ENST00000483881 NUTM2FA1L443 756 aa6.98□□□□□ -1.29
PKP4-212ENST00000483881 KRBA1A5PL33 1030 aa6.98□□□□□ -1.29
PKP4-212ENST00000483881 HAP1P54257 671 aaPredicted RBP6.98□□□□□ -1.29
PKP4-212ENST00000483881 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.98□□□□□ -1.297e-7■■■■■ 29.7
PKP4-212ENST00000483881 PAXIP1Q6ZW49 1069 aaPredicted RBP6.98□□□□□ -1.29
PKP4-212ENST00000483881 VSIG10Q8N0Z9 540 aa6.98□□□□□ -1.29
PKP4-212ENST00000483881 LINC00528Q8N1L1 170 aa6.98□□□□□ -1.29
PKP4-212ENST00000483881 ENAMQ9NRM1 1142 aa6.98□□□□□ -1.29
PKP4-212ENST00000483881 NLRP7Q8WX94 980 aa6.97□□□□□ -1.29
PKP4-212ENST00000483881 CFAP44Q96MT7 982 aa6.97□□□□□ -1.29
PKP4-212ENST00000483881 JUNDP17535 347 aa6.96□□□□□ -1.3
PKP4-212ENST00000483881 SRSF11Q05519 484 aaKnown RBP6.96□□□□□ -1.3
PKP4-212ENST00000483881 SV2AQ7L0J3 742 aa6.96□□□□□ -1.3
PKP4-212ENST00000483881 CDC14CA4D256 554 aa6.95□□□□□ -1.3
PKP4-212ENST00000483881 UPP2O95045 317 aa6.95□□□□□ -1.3
PKP4-212ENST00000483881 NUDT12Q9BQG2 462 aa6.95□□□□□ -1.3
PKP4-212ENST00000483881 VARSP26640 1264 aaKnown RBP6.94□□□□□ -1.3
PKP4-212ENST00000483881 LINC01559Q495D7 138 aa6.94□□□□□ -1.3
PKP4-212ENST00000483881 SH3RF1Q7Z6J0 888 aa6.94□□□□□ -1.3
PKP4-212ENST00000483881 SLC35F4A4IF30 521 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 FIGNL2A6NMB9 653 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 FCHSD2O94868 740 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 ITGA6P23229 1130 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 ZMYM1Q5SVZ6 1142 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 PODNQ7Z5L7 613 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 SULF1Q8IWU6 871 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 BAP1Q92560 729 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 HLA-CQ95604 372 aa6.93□□□□□ -1.3
PKP4-212ENST00000483881 MEIOBQ8N635 442 aa6.92□□□□□ -1.3
PKP4-212ENST00000483881 TTLL8A6PVC2 850 aa6.91□□□□□ -1.3
PKP4-212ENST00000483881 NR3C2P08235 984 aa6.91□□□□□ -1.3
PKP4-212ENST00000483881 NEDD1Q8NHV4 660 aa6.9□□□□□ -1.3
PKP4-212ENST00000483881 GAS6Q14393 721 aa6.89□□□□□ -1.31
PKP4-212ENST00000483881 KRTAP4-9Q9BYQ8 210 aa6.89□□□□□ -1.31
PKP4-212ENST00000483881 WDR70Q9NW82 654 aa6.89□□□□□ -1.31
PKP4-212ENST00000483881 ZNF511Q8NB15 262 aa6.88□□□□□ -1.31
PKP4-212ENST00000483881 SYMPKQ92797 1274 aaKnown RBP6.88□□□□□ -1.31
PKP4-212ENST00000483881 KRTAP4-2Q9BYR5 136 aa6.88□□□□□ -1.31
PKP4-212ENST00000483881 UNC93B1Q9H1C4 597 aa6.88□□□□□ -1.31
PKP4-212ENST00000483881 CDK15Q96Q40 435 aa6.87□□□□□ -1.31
PKP4-212ENST00000483881 SEMA6BQ9H3T3 888 aa6.87□□□□□ -1.31
PKP4-212ENST00000483881 ARID5BQ14865 1188 aa6.85□□□□□ -1.31
PKP4-212ENST00000483881 PHOX2BQ99453 314 aa6.85□□□□□ -1.31
PKP4-212ENST00000483881 TSEN34Q9BSV6 310 aaKnown RBP6.85□□□□□ -1.31
PKP4-212ENST00000483881 CCNYL3P0C7X3 344 aa6.84□□□□□ -1.31
PKP4-212ENST00000483881 BCRP11274 1271 aa6.84□□□□□ -1.31
PKP4-212ENST00000483881 GRM5P41594 1212 aa6.84□□□□□ -1.31
PKP4-212ENST00000483881 NR5A1Q13285 461 aa6.84□□□□□ -1.31
PKP4-212ENST00000483881 FOXD4L6Q3SYB3 417 aaPredicted RBP6.84□□□□□ -1.31
PKP4-212ENST00000483881 FOXD4L3Q6VB84 417 aaPredicted RBP6.84□□□□□ -1.31
PKP4-212ENST00000483881 SPTLC1O15269 473 aa6.83□□□□□ -1.32
PKP4-212ENST00000483881 KDM4AO75164 1064 aa6.83□□□□□ -1.32
PKP4-212ENST00000483881 COL8A1P27658 744 aa6.83□□□□□ -1.32
PKP4-212ENST00000483881 FAM174AQ8TBP5 190 aa6.83□□□□□ -1.32
PKP4-212ENST00000483881 SCO2A0A1W2PP80 73 aa6.82□□□□□ -1.32
PKP4-212ENST00000483881 SNRPNP63162 240 aaKnown RBP6.82□□□□□ -1.32
PKP4-212ENST00000483881 EVA1BQ9NVM1 165 aa6.82□□□□□ -1.32
PKP4-212ENST00000483881 GUCA2AQ02747 115 aa6.81□□□□□ -1.32
PKP4-212ENST00000483881 CD46P15529 392 aa6.8□□□□□ -1.32
PKP4-212ENST00000483881 HIC1Q14526 733 aa6.8□□□□□ -1.32
PKP4-212ENST00000483881 ACDQ96AP0 544 aa6.8□□□□□ -1.32
PKP4-212ENST00000483881 C1QTNF9BB2RNN3 333 aa6.79□□□□□ -1.32
PKP4-212ENST00000483881 BCANQ96GW7 911 aa6.79□□□□□ -1.32
PKP4-212ENST00000483881 ZFP64Q9NPA5 681 aa6.79□□□□□ -1.32
PKP4-212ENST00000483881 IGF1RP08069 1367 aa6.79□□□□□ -1.32
PKP4-212ENST00000483881 SENP3-EIF4A1A0A087X0R7 540 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 COBLO75128 1261 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 MS4A1P11836 297 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 KCNH2Q12809 1159 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 ARTNQ5T4W7 220 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 TSHZ2Q9NRE2 1034 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 MBIPQ9NS73 344 aa6.78□□□□□ -1.32
PKP4-212ENST00000483881 CUEDC1Q9NWM3 386 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms