RNA–Protein interactions for RNA: ENST00000483764.5

MRPL28-210, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,512 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-210ENST00000483764 GGNBP2Q9H3C7 697 aa23.15■■□□□ 1.3
MRPL28-210ENST00000483764 MON2Q7Z3U7 1717 aa23.15■■□□□ 1.3
MRPL28-210ENST00000483764 TTC21BQ7Z4L5 1316 aa23.15■■□□□ 1.3
MRPL28-210ENST00000483764 LTBP4Q8N2S1 1624 aa23.14■■□□□ 1.29
MRPL28-210ENST00000483764 NLRP13Q86W25 1043 aa23.13■■□□□ 1.29
MRPL28-210ENST00000483764 SSH2Q76I76 1423 aa23.13■■□□□ 1.29
MRPL28-210ENST00000483764 PPP2R1AP30153 589 aa23.13■■□□□ 1.29
MRPL28-210ENST00000483764 CCDC184Q52MB2 194 aa23.13■■□□□ 1.29
MRPL28-210ENST00000483764 NME9Q86XW9 330 aa23.12■■□□□ 1.29
MRPL28-210ENST00000483764 MRS2Q9HD23 443 aa23.12■■□□□ 1.29
MRPL28-210ENST00000483764 PSME1Q06323 249 aa23.11■■□□□ 1.29
MRPL28-210ENST00000483764 TTC21AQ8NDW8 1320 aa23.11■■□□□ 1.29
MRPL28-210ENST00000483764 FOXO3O43524 673 aa23.1■■□□□ 1.29
MRPL28-210ENST00000483764 SLAIN2Q9P270 581 aa23.1■■□□□ 1.29
MRPL28-210ENST00000483764 BRD4O60885 1362 aaPredicted RBP23.1■■□□□ 1.29
MRPL28-210ENST00000483764 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
MRPL28-210ENST00000483764 NRKQ7Z2Y5 1582 aa23.08■■□□□ 1.29
MRPL28-210ENST00000483764 COG3Q96JB2 828 aa23.07■■□□□ 1.28
MRPL28-210ENST00000483764 ZRANB1Q9UGI0 708 aa23.07■■□□□ 1.28
MRPL28-210ENST00000483764 KIF1AQ12756 1690 aa23.06■■□□□ 1.28
MRPL28-210ENST00000483764 KIF20BQ96Q89 1820 aa23.05■■□□□ 1.28
MRPL28-210ENST00000483764 PAK3O75914 559 aaPredicted RBP23.05■■□□□ 1.28
MRPL28-210ENST00000483764 BRINP3Q76B58 766 aa23.03■■□□□ 1.28
MRPL28-210ENST00000483764 KRT28Q7Z3Y7 464 aa23.03■■□□□ 1.28
MRPL28-210ENST00000483764 SUPT16HQ9Y5B9 1047 aaKnown RBP23.03■■□□□ 1.28
MRPL28-210ENST00000483764 ANKRD26Q9UPS8 1709 aa23.02■■□□□ 1.28
MRPL28-210ENST00000483764 XPCQ01831 940 aaPredicted RBP23.02■■□□□ 1.28
MRPL28-210ENST00000483764 NPHP3Q7Z494 1330 aa23.01■■□□□ 1.27
MRPL28-210ENST00000483764 ABTB2Q8N961 1025 aa23.01■■□□□ 1.27
MRPL28-210ENST00000483764 USP31Q70CQ4 1352 aa23■■□□□ 1.27
MRPL28-210ENST00000483764 NLRP6P59044 892 aa22.99■■□□□ 1.27
MRPL28-210ENST00000483764 OVOS2A0A0J9YW53 1432 aa22.99■■□□□ 1.27
MRPL28-210ENST00000483764 OVOS2Q6IE36 1432 aa22.99■■□□□ 1.27
MRPL28-210ENST00000483764 NEFLP07196 543 aa22.98■■□□□ 1.27
MRPL28-210ENST00000483764 MTHFSP49914 203 aa22.98■■□□□ 1.27
MRPL28-210ENST00000483764 PNISRQ8TF01 805 aaKnown RBP22.98■■□□□ 1.27
MRPL28-210ENST00000483764 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
MRPL28-210ENST00000483764 FAM9BQ8IZU0 186 aa22.97■■□□□ 1.27
MRPL28-210ENST00000483764 NUTM2GQ5VZR2 741 aa22.96■■□□□ 1.27
MRPL28-210ENST00000483764 AATKQ6ZMQ8 1374 aa22.96■■□□□ 1.27
MRPL28-210ENST00000483764 FBLN1P23142 703 aa22.95■■□□□ 1.26
MRPL28-210ENST00000483764 PIK3C2AO00443 1686 aa22.95■■□□□ 1.26
MRPL28-210ENST00000483764 FBXO41Q8TF61 875 aa22.94■■□□□ 1.26
MRPL28-210ENST00000483764 CFAP53Q96M91 514 aa22.93■■□□□ 1.26
MRPL28-210ENST00000483764 POLKQ9UBT6 870 aa22.93■■□□□ 1.26
MRPL28-210ENST00000483764 SBNO1A3KN83 1393 aa22.93■■□□□ 1.26
MRPL28-210ENST00000483764 LMOD2Q6P5Q4 547 aa22.92■■□□□ 1.26
MRPL28-210ENST00000483764 TRPM3Q9HCF6 1732 aaPredicted RBP22.91■■□□□ 1.26
MRPL28-210ENST00000483764 PXDNQ92626 1479 aa22.91■■□□□ 1.26
MRPL28-210ENST00000483764 TOM1O60784 492 aa22.9■■□□□ 1.26
MRPL28-210ENST00000483764 SOS2Q07890 1332 aaPredicted RBP22.9■■□□□ 1.26
MRPL28-210ENST00000483764 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
MRPL28-210ENST00000483764 SOX12O15370 315 aa22.88■■□□□ 1.25
MRPL28-210ENST00000483764 HNRNPUQ00839 825 aaKnown RBP eCLIP22.88■■□□□ 1.25
MRPL28-210ENST00000483764 RRS1Q15050 365 aaKnown RBP22.88■■□□□ 1.25
MRPL28-210ENST00000483764 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
MRPL28-210ENST00000483764 USP54Q70EL1 1684 aa22.87■■□□□ 1.25
MRPL28-210ENST00000483764 SPATA31A3Q5VYP0 1347 aa22.87■■□□□ 1.25
MRPL28-210ENST00000483764 WDR43Q15061 677 aaKnown RBP eCLIP22.87■■□□□ 1.25
MRPL28-210ENST00000483764 ERICH6BQ5W0A0 696 aa22.87■■□□□ 1.25
MRPL28-210ENST00000483764 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
MRPL28-210ENST00000483764 TNS3Q68CZ2 1445 aa22.86■■□□□ 1.25
MRPL28-210ENST00000483764 SMG6Q86US8 1419 aaKnown RBP22.86■■□□□ 1.25
MRPL28-210ENST00000483764 IQSEC2Q5JU85 1478 aa22.85■■□□□ 1.25
MRPL28-210ENST00000483764 KCNH5Q8NCM2 988 aa22.85■■□□□ 1.25
MRPL28-210ENST00000483764 CERKQ8TCT0 537 aa22.85■■□□□ 1.25
MRPL28-210ENST00000483764 ZBED9Q6R2W3 1325 aa22.85■■□□□ 1.25
MRPL28-210ENST00000483764 INSRP06213 1382 aa22.85■■□□□ 1.25
MRPL28-210ENST00000483764 ALS2Q96Q42 1657 aa22.83■■□□□ 1.25
MRPL28-210ENST00000483764 MARF1Q9Y4F3 1742 aaKnown RBP22.83■■□□□ 1.25
MRPL28-210ENST00000483764 UBAP1LF5GYI3 381 aa22.83■■□□□ 1.25
MRPL28-210ENST00000483764 ADAMTS8Q9UP79 889 aa22.83■■□□□ 1.25
MRPL28-210ENST00000483764 USP19O94966 1318 aa22.83■■□□□ 1.25
MRPL28-210ENST00000483764 ARHGEF10O15013 1369 aa22.83■■□□□ 1.25
MRPL28-210ENST00000483764 MAP3K19Q56UN5 1328 aa22.82■■□□□ 1.24
MRPL28-210ENST00000483764 ROBO1Q9Y6N7 1651 aa22.82■■□□□ 1.24
MRPL28-210ENST00000483764 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
MRPL28-210ENST00000483764 GCP02774 474 aa22.82■■□□□ 1.24
MRPL28-210ENST00000483764 CDK12Q9NYV4 1490 aaPredicted RBP22.82■■□□□ 1.24
MRPL28-210ENST00000483764 NHSL1Q5SYE7 1610 aa22.82■■□□□ 1.24
MRPL28-210ENST00000483764 DIAPH1O60610 1272 aaKnown RBP22.81■■□□□ 1.24
MRPL28-210ENST00000483764 PLEKHG5O94827 1062 aa22.81■■□□□ 1.24
MRPL28-210ENST00000483764 COL3A1P02461 1466 aaPredicted RBP22.8■■□□□ 1.24
MRPL28-210ENST00000483764 PIP4K2BP78356 416 aa22.8■■□□□ 1.24
MRPL28-210ENST00000483764 NUDCQ9Y266 331 aa22.8■■□□□ 1.24
MRPL28-210ENST00000483764 SLIT3O75094 1523 aa22.79■■□□□ 1.24
MRPL28-210ENST00000483764 AMPHP49418 695 aa22.78■■□□□ 1.24
MRPL28-210ENST00000483764 NFAT5O94916 1531 aa22.77■■□□□ 1.24
MRPL28-210ENST00000483764 KIF24Q5T7B8 1368 aa22.77■■□□□ 1.24
MRPL28-210ENST00000483764 LRRC59Q96AG4 307 aaKnown RBP22.77■■□□□ 1.24
MRPL28-210ENST00000483764 AHDC1Q5TGY3 1603 aaPredicted RBP22.76■■□□□ 1.23
MRPL28-210ENST00000483764 FLT4P35916 1363 aa22.76■■□□□ 1.23
MRPL28-210ENST00000483764 HSP90AB2PQ58FF8 381 aa22.76■■□□□ 1.23
MRPL28-210ENST00000483764 MED1Q15648 1581 aaPredicted RBP22.75■■□□□ 1.23
MRPL28-210ENST00000483764 U2SURPO15042 1029 aaKnown RBP22.75■■□□□ 1.23
MRPL28-210ENST00000483764 IL13P35225 146 aa22.75■■□□□ 1.23
MRPL28-210ENST00000483764 FKBP8Q14318 412 aa22.75■■□□□ 1.23
MRPL28-210ENST00000483764 CABLES1Q8TDN4 633 aa22.75■■□□□ 1.23
MRPL28-210ENST00000483764 SHPRHQ149N8 1683 aa22.75■■□□□ 1.23
MRPL28-210ENST00000483764 U2AF1L5P0DN76 240 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms