RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 KIAA1107Q9UPP5 1409 aa9.59□□□□□ -0.87
COL4A5-205ENST00000483338 DNAJC5Q9H3Z4 198 aa9.58□□□□□ -0.88
COL4A5-205ENST00000483338 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
COL4A5-205ENST00000483338 FOXD4L1Q9NU39 408 aa9.58□□□□□ -0.88
COL4A5-205ENST00000483338 SNX21Q969T3 373 aa9.58□□□□□ -0.88
COL4A5-205ENST00000483338 KIAA0556O60303 1618 aa9.58□□□□□ -0.88
COL4A5-205ENST00000483338 CEP83Q9Y592 693 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 USP47Q96K76 1375 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 PHF14O94880 888 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 FGD6Q6ZV73 1430 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 NPC1L1Q9UHC9 1359 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 ICE2Q659A1 982 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 KIF18AQ8NI77 898 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 CLUAP1Q96AJ1 413 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 RBM27Q9P2N5 1060 aaKnown RBP9.57□□□□□ -0.88
COL4A5-205ENST00000483338 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
COL4A5-205ENST00000483338 BCAR3O75815 825 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 GYS2P54840 703 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 FAM69CQ0P6D2 419 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 RNF214Q8ND24 703 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 LMBRD1Q9NUN5 540 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 PDZRN3Q9UPQ7 1066 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 LRSAM1Q6UWE0 723 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 KRT222Q8N1A0 295 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 INSRP06213 1382 aa9.56□□□□□ -0.88
COL4A5-205ENST00000483338 ARHGEF11O15085 1522 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 CDK13Q14004 1512 aaKnown RBP9.55□□□□□ -0.88
COL4A5-205ENST00000483338 CCDC172P0C7W6 258 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 MCTP1Q6DN14 999 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 RASSF4Q9H2L5 321 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 TTC12Q9H892 705 aaPredicted RBP9.55□□□□□ -0.88
COL4A5-205ENST00000483338 DIAPH3Q9NSV4 1193 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 PARD3Q8TEW0 1356 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 PLEKHH1Q9ULM0 1364 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 RPRD2Q5VT52 1461 aaKnown RBP9.55□□□□□ -0.88
COL4A5-205ENST00000483338 IRF6O14896 467 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 CYP2C19P33261 490 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 NFATC2IPQ8NCF5 419 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 CLASP1Q7Z460 1538 aa9.55□□□□□ -0.88
COL4A5-205ENST00000483338 FYCO1Q9BQS8 1478 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 CD2BP2O95400 341 aaKnown RBP9.54□□□□□ -0.88
COL4A5-205ENST00000483338 ST7Q9NRC1 585 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 SYCE3A1L190 88 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 GUCY2CP25092 1073 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 GPT2Q8TD30 523 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 EPRSP07814 1512 aaKnown RBP9.54□□□□□ -0.88
COL4A5-205ENST00000483338 KDM5CP41229 1560 aa9.54□□□□□ -0.88
COL4A5-205ENST00000483338 CGNL1Q0VF96 1302 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 E9PCH4 1651 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 GPATCH11Q8N954 259 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 TOMM22Q9NS69 142 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 TMEM63CQ9P1W3 806 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
COL4A5-205ENST00000483338 MPHOSPH9Q99550 1183 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 FAM53CQ9NYF3 392 aa9.53□□□□□ -0.88
COL4A5-205ENST00000483338 CHAF1AQ13111 956 aaPredicted RBP9.52□□□□□ -0.88
COL4A5-205ENST00000483338 NAA30Q147X3 362 aaPredicted RBP9.52□□□□□ -0.88
COL4A5-205ENST00000483338 CTR9Q6PD62 1173 aa9.52□□□□□ -0.88
COL4A5-205ENST00000483338 ZNF446Q9NWS9 450 aa9.52□□□□□ -0.88
COL4A5-205ENST00000483338 SAMD9Q5K651 1589 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 SATB1Q01826 763 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 SYCP1Q15431 976 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 COG6Q9Y2V7 657 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 ZNF521Q96K83 1311 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 ATP10BO94823 1461 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 TRIM66O15016 1216 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 CEP120Q8N960 986 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 SLC26A8Q96RN1 970 aa9.52□□□□□ -0.89
COL4A5-205ENST00000483338 GAS2L2Q8NHY3 880 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 BRMS1Q9HCU9 246 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 STK26Q9P289 416 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 POLKQ9UBT6 870 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
COL4A5-205ENST00000483338 KDM6BO15054 1643 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 TSPY4P0CV99 314 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 TSPY10P0CW01 314 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 SRPK2P78362 688 aaKnown RBP9.51□□□□□ -0.89
COL4A5-205ENST00000483338 GOLGA2Q08379 1002 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 EFCAB2Q5VUJ9 269 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 PANK1Q8TE04 598 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 PCDHB15Q9Y5E8 787 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 MCCP23508 829 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 CREBRFQ8IUR6 639 aa9.51□□□□□ -0.89
COL4A5-205ENST00000483338 CASQ1P31415 396 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 TSGA10IPQ3SY00 556 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 TICAM2Q86XR7 235 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 ANKRD30BQ9BXX2 1392 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 DNAJC21Q5F1R6 531 aaKnown RBP9.5□□□□□ -0.89
COL4A5-205ENST00000483338 C10orf67Q8IYJ2 551 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 RNF217Q8TC41 542 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 KIF2CQ99661 725 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 SLC4A1APQ9BWU0 796 aaKnown RBP9.5□□□□□ -0.89
COL4A5-205ENST00000483338 NSFL1CQ9UNZ2 370 aaKnown RBP9.5□□□□□ -0.89
COL4A5-205ENST00000483338 KIF16BQ96L93 1317 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 SLFN5Q08AF3 891 aa9.5□□□□□ -0.89
COL4A5-205ENST00000483338 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.5□□□□□ -0.89
COL4A5-205ENST00000483338 K7ELQ4 463 aaPredicted RBP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 PRPF40AO75400 957 aaKnown RBP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL4A5-205ENST00000483338 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms