RNA–Protein interactions for RNA: ENST00000483173.5

BRD9-204, Transcript of bromodomain containing 9, humanhuman

TSL 2 BASIC

Gene BRD9, Length 2,120 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-204ENST00000483173 NME9Q86XW9 330 aa16.96■□□□□ 0.3
BRD9-204ENST00000483173 NGDNQ8NEJ9 315 aaKnown RBP16.95■□□□□ 0.3
BRD9-204ENST00000483173 TMEM94Q12767 1356 aa16.95■□□□□ 0.3
BRD9-204ENST00000483173 TTC21BQ7Z4L5 1316 aa16.94■□□□□ 0.3
BRD9-204ENST00000483173 MTHFSP49914 203 aa16.94■□□□□ 0.3
BRD9-204ENST00000483173 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
BRD9-204ENST00000483173 SSH2Q76I76 1423 aa16.93■□□□□ 0.3
BRD9-204ENST00000483173 NCOA3Q9Y6Q9 1424 aa16.93■□□□□ 0.3
BRD9-204ENST00000483173 INSRP06213 1382 aa16.92■□□□□ 0.3
BRD9-204ENST00000483173 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
BRD9-204ENST00000483173 ZRANB1Q9UGI0 708 aa16.91■□□□□ 0.3
BRD9-204ENST00000483173 PHF8Q9UPP1 1060 aa16.91■□□□□ 0.3
BRD9-204ENST00000483173 ADAMTS8Q9UP79 889 aa16.91■□□□□ 0.3
BRD9-204ENST00000483173 ZBED9Q6R2W3 1325 aa16.91■□□□□ 0.3
BRD9-204ENST00000483173 COG3Q96JB2 828 aa16.9■□□□□ 0.3
BRD9-204ENST00000483173 ESCO1Q5FWF5 840 aa16.9■□□□□ 0.3
BRD9-204ENST00000483173 BLMP54132 1417 aaPredicted RBP16.89■□□□□ 0.3
BRD9-204ENST00000483173 TTC21AQ8NDW8 1320 aa16.89■□□□□ 0.29
BRD9-204ENST00000483173 ZNF335Q9H4Z2 1342 aaPredicted RBP16.89■□□□□ 0.29
BRD9-204ENST00000483173 CFAP53Q96M91 514 aa16.89■□□□□ 0.29
BRD9-204ENST00000483173 DCCP43146 1447 aa16.89■□□□□ 0.29
BRD9-204ENST00000483173 PRKCSHP14314 528 aaPredicted RBP16.88■□□□□ 0.29
BRD9-204ENST00000483173 DMRT2Q9Y5R5 561 aa16.88■□□□□ 0.29
BRD9-204ENST00000483173 OVOS2A0A0J9YW53 1432 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 OVOS2Q6IE36 1432 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 FKBP8Q14318 412 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 C1orf167Q5SNV9 1468 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 ATF3P18847 181 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 ORAI2Q96SN7 254 aa16.87■□□□□ 0.29
BRD9-204ENST00000483173 SHPRHQ149N8 1683 aa16.86■□□□□ 0.29
BRD9-204ENST00000483173 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
BRD9-204ENST00000483173 FBLN1P23142 703 aa16.86■□□□□ 0.29
BRD9-204ENST00000483173 AATKQ6ZMQ8 1374 aa16.86■□□□□ 0.29
BRD9-204ENST00000483173 POLKQ9UBT6 870 aa16.85■□□□□ 0.29
BRD9-204ENST00000483173 SENP3-EIF4A1A0A087X0R7 540 aa16.85■□□□□ 0.29
BRD9-204ENST00000483173 XIRP1Q702N8 1843 aaKnown RBP16.85■□□□□ 0.29
BRD9-204ENST00000483173 MSH6P52701 1360 aa16.85■□□□□ 0.29
BRD9-204ENST00000483173 MST1RQ04912 1400 aa16.85■□□□□ 0.29
BRD9-204ENST00000483173 CADPS2Q86UW7 1296 aa16.84■□□□□ 0.29
BRD9-204ENST00000483173 PNPLA6Q8IY17 1366 aa16.84■□□□□ 0.29
BRD9-204ENST00000483173 COL3A1P02461 1466 aaPredicted RBP16.84■□□□□ 0.29
BRD9-204ENST00000483173 PIK3C2AO00443 1686 aa16.83■□□□□ 0.29
BRD9-204ENST00000483173 MAP2P11137 1827 aaKnown RBP16.83■□□□□ 0.29
BRD9-204ENST00000483173 USP31Q70CQ4 1352 aa16.83■□□□□ 0.28
BRD9-204ENST00000483173 SMG6Q86US8 1419 aaKnown RBP16.82■□□□□ 0.28
BRD9-204ENST00000483173 PSME1Q06323 249 aa16.82■□□□□ 0.28
BRD9-204ENST00000483173 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
BRD9-204ENST00000483173 PPM1GO15355 546 aaPredicted RBP16.81■□□□□ 0.28
BRD9-204ENST00000483173 FOXO3O43524 673 aa16.81■□□□□ 0.28
BRD9-204ENST00000483173 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
BRD9-204ENST00000483173 KIF1AQ12756 1690 aa16.81■□□□□ 0.28
BRD9-204ENST00000483173 RRS1Q15050 365 aaKnown RBP16.81■□□□□ 0.28
BRD9-204ENST00000483173 NLRP6P59044 892 aa16.79■□□□□ 0.28
BRD9-204ENST00000483173 ABTB2Q8N961 1025 aa16.79■□□□□ 0.28
BRD9-204ENST00000483173 CDK12Q9NYV4 1490 aaPredicted RBP16.79■□□□□ 0.28
BRD9-204ENST00000483173 CCDC146Q8IYE0 955 aa16.79■□□□□ 0.28
BRD9-204ENST00000483173 NUDCQ9Y266 331 aa16.79■□□□□ 0.28
BRD9-204ENST00000483173 DIAPH1O60610 1272 aaKnown RBP16.78■□□□□ 0.28
BRD9-204ENST00000483173 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
BRD9-204ENST00000483173 USP54Q70EL1 1684 aa16.78■□□□□ 0.28
BRD9-204ENST00000483173 NUTM2GQ5VZR2 741 aa16.78■□□□□ 0.28
BRD9-204ENST00000483173 U2AF1L5P0DN76 240 aaPredicted RBP16.77■□□□□ 0.28
BRD9-204ENST00000483173 U2AF1Q01081 240 aaKnown RBP eCLIP16.77■□□□□ 0.28
BRD9-204ENST00000483173 XPCQ01831 940 aaPredicted RBP16.77■□□□□ 0.28
BRD9-204ENST00000483173 MARF1Q9Y4F3 1742 aaKnown RBP16.77■□□□□ 0.27
BRD9-204ENST00000483173 RBM19Q9Y4C8 960 aaKnown RBP16.76■□□□□ 0.27
BRD9-204ENST00000483173 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
BRD9-204ENST00000483173 SOX12O15370 315 aa16.76■□□□□ 0.27
BRD9-204ENST00000483173 NEFLP07196 543 aa16.75■□□□□ 0.27
BRD9-204ENST00000483173 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
BRD9-204ENST00000483173 TRPM3Q9HCF6 1732 aaPredicted RBP16.74■□□□□ 0.27
BRD9-204ENST00000483173 APAF1O14727 1248 aa16.74■□□□□ 0.27
BRD9-204ENST00000483173 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
BRD9-204ENST00000483173 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
BRD9-204ENST00000483173 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
BRD9-204ENST00000483173 IL13P35225 146 aa16.72■□□□□ 0.27
BRD9-204ENST00000483173 SLAIN2Q9P270 581 aa16.72■□□□□ 0.27
BRD9-204ENST00000483173 NPHP3Q7Z494 1330 aa16.71■□□□□ 0.27
BRD9-204ENST00000483173 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
BRD9-204ENST00000483173 DDX17Q92841 729 aaKnown RBP16.71■□□□□ 0.27
BRD9-204ENST00000483173 BRINP3Q76B58 766 aa16.7■□□□□ 0.26
BRD9-204ENST00000483173 SBNO1A3KN83 1393 aa16.7■□□□□ 0.26
BRD9-204ENST00000483173 FLT4P35916 1363 aa16.7■□□□□ 0.26
BRD9-204ENST00000483173 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
BRD9-204ENST00000483173 HSP90AB2PQ58FF8 381 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 LMOD2Q6P5Q4 547 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 ZNF521Q96K83 1311 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 TCP11L2Q8N4U5 519 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 PLEKHF1Q96S99 279 aa16.69■□□□□ 0.26
BRD9-204ENST00000483173 AMPHP49418 695 aa16.68■□□□□ 0.26
BRD9-204ENST00000483173 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
BRD9-204ENST00000483173 NFAT5O94916 1531 aa16.68■□□□□ 0.26
BRD9-204ENST00000483173 ALS2Q96Q42 1657 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 LTBP4Q8N2S1 1624 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 PXDNQ92626 1479 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 KIF24Q5T7B8 1368 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 FCHSD2O94868 740 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 KCNH5Q8NCM2 988 aa16.67■□□□□ 0.26
BRD9-204ENST00000483173 MSH5O43196 834 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms