RNA–Protein interactions for RNA: ENST00000483146.1

COMMD2-204, Transcript of COMM domain containing 2, humanhuman

TSL 2

Gene COMMD2, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-204ENST00000483146 RTL5Q5HYW3 569 aaPredicted RBP12.41□□□□□ -0.42
COMMD2-204ENST00000483146 PER1O15534 1290 aaPredicted RBP12.4□□□□□ -0.42
COMMD2-204ENST00000483146 MAP10Q9P2G4 905 aa12.4□□□□□ -0.42
COMMD2-204ENST00000483146 AXIN1O15169 862 aa12.39□□□□□ -0.43
COMMD2-204ENST00000483146 ATP1B4Q9UN42 357 aaPredicted RBP12.39□□□□□ -0.43
COMMD2-204ENST00000483146 POTECB2RU33 542 aa12.38□□□□□ -0.43
COMMD2-204ENST00000483146 ALDH1A1P00352 501 aa12.38□□□□□ -0.43
COMMD2-204ENST00000483146 DACH1Q9UI36 760 aa12.38□□□□□ -0.43
COMMD2-204ENST00000483146 F12P00748 615 aaPredicted RBP12.37□□□□□ -0.43
COMMD2-204ENST00000483146 CRIPAKQ8N1N5 446 aa12.37□□□□□ -0.43
COMMD2-204ENST00000483146 DDRGK1Q96HY6 314 aa12.37□□□□□ -0.43
COMMD2-204ENST00000483146 SIAH2O43255 324 aa12.36□□□□□ -0.43
COMMD2-204ENST00000483146 CTC1Q2NKJ3 1217 aa12.36□□□□□ -0.43
COMMD2-204ENST00000483146 ZNF511Q8NB15 262 aa12.36□□□□□ -0.43
COMMD2-204ENST00000483146 HPS1Q92902 700 aa12.36□□□□□ -0.43
COMMD2-204ENST00000483146 HELBQ8NG08 1087 aaPredicted RBP12.35□□□□□ -0.43
COMMD2-204ENST00000483146 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
COMMD2-204ENST00000483146 PLEKHG3A1L390 1219 aa12.33□□□□□ -0.44
COMMD2-204ENST00000483146 SH3D19Q5HYK7 790 aa12.33□□□□□ -0.44
COMMD2-204ENST00000483146 PROCA1Q8NCQ7 364 aaPredicted RBP12.33□□□□□ -0.44
COMMD2-204ENST00000483146 SMCPP49901 116 aaPredicted RBP12.32□□□□□ -0.44
COMMD2-204ENST00000483146 WASF2Q9Y6W5 498 aa12.31□□□□□ -0.44
COMMD2-204ENST00000483146 FOXJ1Q92949 421 aa12.3□□□□□ -0.44
COMMD2-204ENST00000483146 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
COMMD2-204ENST00000483146 VARSP26640 1264 aaKnown RBP12.29□□□□□ -0.44
COMMD2-204ENST00000483146 CTDSPL2Q05D32 466 aa12.29□□□□□ -0.44
COMMD2-204ENST00000483146 NEUROD2Q15784 382 aa12.29□□□□□ -0.44
COMMD2-204ENST00000483146 AGERQ15109 404 aa12.28□□□□□ -0.44
COMMD2-204ENST00000483146 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
COMMD2-204ENST00000483146 GMPR2Q9P2T1 348 aaKnown RBP12.28□□□□□ -0.44
COMMD2-204ENST00000483146 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.27□□□□□ -0.45
COMMD2-204ENST00000483146 ZNF775Q96BV0 537 aaPredicted RBP12.26□□□□□ -0.45
COMMD2-204ENST00000483146 FAM174AQ8TBP5 190 aa12.24□□□□□ -0.45
COMMD2-204ENST00000483146 ATP13A2Q9NQ11 1180 aa12.24□□□□□ -0.45
COMMD2-204ENST00000483146 C11orf95C9JLR9 678 aaPredicted RBP12.23□□□□□ -0.45
COMMD2-204ENST00000483146 ARMC2Q8NEN0 867 aa12.23□□□□□ -0.45
COMMD2-204ENST00000483146 LRRN4Q8WUT4 740 aa12.23□□□□□ -0.45
COMMD2-204ENST00000483146 ARID5BQ14865 1188 aa12.22□□□□□ -0.45
COMMD2-204ENST00000483146 TPRNQ4KMQ1 711 aa12.22□□□□□ -0.45
COMMD2-204ENST00000483146 C4orf48Q5BLP8 95 aa12.22□□□□□ -0.45
COMMD2-204ENST00000483146 BPHLQ86WA6 291 aaPredicted RBP12.22□□□□□ -0.45
COMMD2-204ENST00000483146 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
COMMD2-204ENST00000483146 PPP2R2DQ66LE6 453 aa12.21□□□□□ -0.45
COMMD2-204ENST00000483146 AP1G2O75843 785 aa12.2□□□□□ -0.46
COMMD2-204ENST00000483146 NBPF14Q5TI25 921 aa12.2□□□□□ -0.46
COMMD2-204ENST00000483146 MPNDQ8N594 471 aa12.2□□□□□ -0.46
COMMD2-204ENST00000483146 CAPN5O15484 640 aaPredicted RBP12.19□□□□□ -0.46
COMMD2-204ENST00000483146 NNTQ13423 1086 aa12.19□□□□□ -0.46
COMMD2-204ENST00000483146 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
COMMD2-204ENST00000483146 BRPF1P55201 1214 aaPredicted RBP12.17□□□□□ -0.46
COMMD2-204ENST00000483146 ADH1CP00326 375 aa12.16□□□□□ -0.46
COMMD2-204ENST00000483146 NR6A1Q15406 480 aa12.16□□□□□ -0.46
COMMD2-204ENST00000483146 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
COMMD2-204ENST00000483146 BMP1P13497 986 aa12.15□□□□□ -0.46
COMMD2-204ENST00000483146 SH3RF1Q7Z6J0 888 aa12.15□□□□□ -0.46
COMMD2-204ENST00000483146 CDK15Q96Q40 435 aa12.15□□□□□ -0.46
COMMD2-204ENST00000483146 SENP2Q9HC62 589 aa12.15□□□□□ -0.46
COMMD2-204ENST00000483146 SNRPBP14678 240 aaKnown RBP12.14□□□□□ -0.47
COMMD2-204ENST00000483146 SH3BP5LQ7L8J4 393 aa12.14□□□□□ -0.47
COMMD2-204ENST00000483146 CARD14Q9BXL6 1004 aa12.14□□□□□ -0.47
COMMD2-204ENST00000483146 RFC5P40937 340 aa12.13□□□□□ -0.47
COMMD2-204ENST00000483146 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
COMMD2-204ENST00000483146 TRIM47Q96LD4 638 aa12.13□□□□□ -0.47
COMMD2-204ENST00000483146 WDR4P57081 412 aaKnown RBP12.12□□□□□ -0.47
COMMD2-204ENST00000483146 GOPCQ9HD26 462 aa12.12□□□□□ -0.47
COMMD2-204ENST00000483146 FKBPLQ9UIM3 349 aa12.12□□□□□ -0.47
COMMD2-204ENST00000483146 USP17L8P0C7I0 530 aa12.11□□□□□ -0.47
COMMD2-204ENST00000483146 GRM5P41594 1212 aa12.11□□□□□ -0.47
COMMD2-204ENST00000483146 TRIM46Q7Z4K8 759 aa12.11□□□□□ -0.47
COMMD2-204ENST00000483146 C1QTNF2Q9BXJ5 285 aa12.11□□□□□ -0.47
COMMD2-204ENST00000483146 TIMP2P16035 220 aa12.1□□□□□ -0.47
COMMD2-204ENST00000483146 EPS8L1Q8TE68 723 aa12.1□□□□□ -0.47
COMMD2-204ENST00000483146 NR3C2P08235 984 aa12.09□□□□□ -0.47
COMMD2-204ENST00000483146 NR5A1Q13285 461 aa12.09□□□□□ -0.47
COMMD2-204ENST00000483146 PDXDC2PQ6P474 469 aa12.09□□□□□ -0.47
COMMD2-204ENST00000483146 KIFC2Q96AC6 838 aa12.09□□□□□ -0.47
COMMD2-204ENST00000483146 ARHGAP9Q9BRR9 750 aa12.09□□□□□ -0.47
COMMD2-204ENST00000483146 HMX1Q9NP08 348 aaPredicted RBP12.09□□□□□ -0.47
COMMD2-204ENST00000483146 ERFEQ4G0M1 354 aa12.08□□□□□ -0.48
COMMD2-204ENST00000483146 VASH1Q7L8A9 365 aaPredicted RBP12.08□□□□□ -0.48
COMMD2-204ENST00000483146 KLF16Q9BXK1 252 aaPredicted RBP12.08□□□□□ -0.48
COMMD2-204ENST00000483146 FSHRP23945 695 aa12.07□□□□□ -0.48
COMMD2-204ENST00000483146 ZIC2O95409 532 aaPredicted RBP12.06□□□□□ -0.48
COMMD2-204ENST00000483146 TRMT44Q8IYL2 757 aaKnown RBP12.06□□□□□ -0.48
COMMD2-204ENST00000483146 ITPKCQ96DU7 683 aa12.06□□□□□ -0.48
COMMD2-204ENST00000483146 ZFAND3Q9H8U3 227 aa12.06□□□□□ -0.48
COMMD2-204ENST00000483146 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
COMMD2-204ENST00000483146 MAP4K5Q9Y4K4 846 aa12.05□□□□□ -0.48
COMMD2-204ENST00000483146 TMEM259Q4ZIN3 620 aa12.04□□□□□ -0.48
COMMD2-204ENST00000483146 ZFP42Q96MM3 310 aa12.04□□□□□ -0.48
COMMD2-204ENST00000483146 ZC3H4Q9UPT8 1303 aaKnown RBP12.04□□□□□ -0.48
COMMD2-204ENST00000483146 PTK2Q05397 1052 aa12.03□□□□□ -0.48
COMMD2-204ENST00000483146 MRPL14Q6P1L8 145 aaKnown RBP12.03□□□□□ -0.48
COMMD2-204ENST00000483146 TREML4Q6UXN2 200 aa12.02□□□□□ -0.49
COMMD2-204ENST00000483146 PURBQ96QR8 312 aaKnown RBP12.02□□□□□ -0.49
COMMD2-204ENST00000483146 PNMA1Q8ND90 353 aa12.01□□□□□ -0.49
COMMD2-204ENST00000483146 SLC10A4Q96EP9 437 aa12.01□□□□□ -0.49
COMMD2-204ENST00000483146 OCSTAMPQ9BR26 566 aa12.01□□□□□ -0.49
COMMD2-204ENST00000483146 SCARF1Q14162 830 aa12□□□□□ -0.49
COMMD2-204ENST00000483146 CCDC116Q8IYX3 515 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms