RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 DESI1Q6ICB0 168 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 ZBTB3Q9H5J0 574 aa7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 GMPR2Q9P2T1 348 aaKnown RBP7.99□□□□□ -1.13
LAPTM4A-202ENST00000483117 KCTD17Q8N5Z5 321 aa7.98□□□□□ -1.13
LAPTM4A-202ENST00000483117 BAP1Q92560 729 aa7.98□□□□□ -1.13
LAPTM4A-202ENST00000483117 TERTO14746 1132 aaKnown RBP7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 SMCPP49901 116 aaPredicted RBP7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 QPCTQ16769 361 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 CTC1Q2NKJ3 1217 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 LYPD8Q6UX82 237 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 EHBP1Q8NDI1 1231 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 HPS1Q92902 700 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 BCANQ96GW7 911 aa7.97□□□□□ -1.13
LAPTM4A-202ENST00000483117 SIAH2O43255 324 aa7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 SLC24A1O60721 1099 aa7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 ALDH1A1P00352 501 aa7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 CTHP32929 405 aa7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 PRPF38BQ5VTL8 546 aaKnown RBP7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 ZSCAN1Q8NBB4 408 aa7.96□□□□□ -1.14
LAPTM4A-202ENST00000483117 KRTAP1-3Q8IUG1 177 aa7.95□□□□□ -1.14
LAPTM4A-202ENST00000483117 TSC1Q92574 1164 aa7.95□□□□□ -1.14
LAPTM4A-202ENST00000483117 MAP10Q9P2G4 905 aa7.95□□□□□ -1.14
LAPTM4A-202ENST00000483117 NUTM2BA6NNL0 878 aaPredicted RBP7.94□□□□□ -1.14
LAPTM4A-202ENST00000483117 NUTM2EB1AL46 878 aaPredicted RBP7.94□□□□□ -1.14
LAPTM4A-202ENST00000483117 PER1O15534 1290 aaPredicted RBP7.94□□□□□ -1.14
LAPTM4A-202ENST00000483117 NUTM2DQ5VT03 806 aaPredicted RBP7.94□□□□□ -1.14
LAPTM4A-202ENST00000483117 NUTM2AQ8IVF1 878 aaPredicted RBP7.94□□□□□ -1.14
LAPTM4A-202ENST00000483117 LILRB3O75022 631 aa7.93□□□□□ -1.14
LAPTM4A-202ENST00000483117 F12P00748 615 aaPredicted RBP7.93□□□□□ -1.14
LAPTM4A-202ENST00000483117 ZNF511Q8NB15 262 aa7.93□□□□□ -1.14
LAPTM4A-202ENST00000483117 GPBP1L1Q9HC44 474 aaPredicted RBP7.93□□□□□ -1.14
LAPTM4A-202ENST00000483117 POLR3EQ9NVU0 708 aa7.93□□□□□ -1.14
LAPTM4A-202ENST00000483117 CLK2P49760 499 aaKnown RBP7.92□□□□□ -1.14
LAPTM4A-202ENST00000483117 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
LAPTM4A-202ENST00000483117 RTL5Q5HYW3 569 aaPredicted RBP7.92□□□□□ -1.14
LAPTM4A-202ENST00000483117 ATP13A2Q9NQ11 1180 aa7.91□□□□□ -1.14
LAPTM4A-202ENST00000483117 TLL2Q9Y6L7 1015 aa7.91□□□□□ -1.14
LAPTM4A-202ENST00000483117 WASF2Q9Y6W5 498 aa7.91□□□□□ -1.14
LAPTM4A-202ENST00000483117 RSPH6AQ9H0K4 717 aa7.9□□□□□ -1.14
LAPTM4A-202ENST00000483117 KDM4CQ9H3R0 1056 aa7.9□□□□□ -1.14
LAPTM4A-202ENST00000483117 VARSP26640 1264 aaKnown RBP7.89□□□□□ -1.15
LAPTM4A-202ENST00000483117 FOXJ1Q92949 421 aa7.89□□□□□ -1.15
LAPTM4A-202ENST00000483117 PSMG3-AS1Q96PY0 264 aa7.89□□□□□ -1.15
LAPTM4A-202ENST00000483117 FAM117AQ9C073 453 aa7.88□□□□□ -1.15
LAPTM4A-202ENST00000483117 HELBQ8NG08 1087 aaPredicted RBP7.87□□□□□ -1.15
LAPTM4A-202ENST00000483117 SNRPBP14678 240 aaKnown RBP7.86□□□□□ -1.15
LAPTM4A-202ENST00000483117 FBXO31Q5XUX0 539 aaPredicted RBP7.86□□□□□ -1.15
LAPTM4A-202ENST00000483117 CAPN5O15484 640 aaPredicted RBP7.85□□□□□ -1.15
LAPTM4A-202ENST00000483117 C4orf48Q5BLP8 95 aa7.85□□□□□ -1.15
LAPTM4A-202ENST00000483117 PROCA1Q8NCQ7 364 aaPredicted RBP7.85□□□□□ -1.15
LAPTM4A-202ENST00000483117 PLEKHG3A1L390 1219 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 BMP1P13497 986 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 KCNMA1Q12791 1236 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 AGERQ15109 404 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 SKIV2LQ15477 1246 aaKnown RBP7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 FAM174AQ8TBP5 190 aa7.84□□□□□ -1.15
LAPTM4A-202ENST00000483117 NNTQ13423 1086 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 ARID5BQ14865 1188 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 SH3D19Q5HYK7 790 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 TRIM46Q7Z4K8 759 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 MPNDQ8N594 471 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 TRIM47Q96LD4 638 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 SENP2Q9HC62 589 aa7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 ATP1B4Q9UN42 357 aaPredicted RBP7.83□□□□□ -1.16
LAPTM4A-202ENST00000483117 GSK3AP49840 483 aa7.82□□□□□ -1.16
LAPTM4A-202ENST00000483117 GMPRP36959 345 aa7.81□□□□□ -1.16
LAPTM4A-202ENST00000483117 BPHLQ86WA6 291 aaPredicted RBP7.81□□□□□ -1.16
LAPTM4A-202ENST00000483117 LRRN4Q8WUT4 740 aa7.81□□□□□ -1.16
LAPTM4A-202ENST00000483117 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.81□□□□□ -1.16
LAPTM4A-202ENST00000483117 ADH1CP00326 375 aa7.8□□□□□ -1.16
LAPTM4A-202ENST00000483117 ARMC2Q8NEN0 867 aa7.8□□□□□ -1.16
LAPTM4A-202ENST00000483117 KIFC2Q96AC6 838 aa7.8□□□□□ -1.16
LAPTM4A-202ENST00000483117 CDK15Q96Q40 435 aa7.8□□□□□ -1.16
LAPTM4A-202ENST00000483117 TIMP2P16035 220 aa7.79□□□□□ -1.16
LAPTM4A-202ENST00000483117 WDR4P57081 412 aaKnown RBP7.79□□□□□ -1.16
LAPTM4A-202ENST00000483117 NBPF14Q5TI25 921 aa7.79□□□□□ -1.16
LAPTM4A-202ENST00000483117 SH3RF1Q7Z6J0 888 aa7.79□□□□□ -1.16
LAPTM4A-202ENST00000483117 MAGEB6P1A0A0J9YX57 407 aa7.78□□□□□ -1.16
LAPTM4A-202ENST00000483117 PPP2R2DQ66LE6 453 aa7.78□□□□□ -1.16
LAPTM4A-202ENST00000483117 SH3BP5LQ7L8J4 393 aa7.78□□□□□ -1.16
LAPTM4A-202ENST00000483117 C1QTNF2Q9BXJ5 285 aa7.78□□□□□ -1.16
LAPTM4A-202ENST00000483117 NR3C2P08235 984 aa7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 GRM5P41594 1212 aa7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 NR6A1Q15406 480 aa7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 ZFP42Q96MM3 310 aa7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 KLF16Q9BXK1 252 aaPredicted RBP7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 CARD14Q9BXL6 1004 aa7.77□□□□□ -1.17
LAPTM4A-202ENST00000483117 AP1G2O75843 785 aa7.76□□□□□ -1.17
LAPTM4A-202ENST00000483117 SLC16A10Q8TF71 515 aa7.76□□□□□ -1.17
LAPTM4A-202ENST00000483117 ZFAND3Q9H8U3 227 aa7.76□□□□□ -1.17
LAPTM4A-202ENST00000483117 ZIC2O95409 532 aaPredicted RBP7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 NR5A1Q13285 461 aa7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 NEUROD2Q15784 382 aa7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 MRPL14Q6P1L8 145 aaKnown RBP7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 TMEM151AQ8N4L1 468 aa7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 ITPKCQ96DU7 683 aa7.75□□□□□ -1.17
LAPTM4A-202ENST00000483117 FSHRP23945 695 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms