RNA–Protein interactions for RNA: ENST00000482791.1

SNX27-205, Transcript of sorting nexin family member 27, humanhuman

TSL 3

Gene SNX27, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-205ENST00000482791 FAM217BQ9NTX9 383 aaPredicted RBP7.76□□□□□ -1.17
SNX27-205ENST00000482791 PPFIA3O75145 1194 aa7.75□□□□□ -1.17
SNX27-205ENST00000482791 TTLL12Q14166 644 aaPredicted RBP7.75□□□□□ -1.17
SNX27-205ENST00000482791 KDM4AO75164 1064 aa7.74□□□□□ -1.17
SNX27-205ENST00000482791 PDE4DQ08499 809 aa7.74□□□□□ -1.17
SNX27-205ENST00000482791 TPRNQ4KMQ1 711 aa7.74□□□□□ -1.17
SNX27-205ENST00000482791 PARP9Q8IXQ6 854 aa7.74□□□□□ -1.17
SNX27-205ENST00000482791 NNTQ13423 1086 aa7.73□□□□□ -1.17
SNX27-205ENST00000482791 GPAT2Q6NUI2 795 aa7.72□□□□□ -1.17
SNX27-205ENST00000482791 GIGYF2Q6Y7W6 1299 aaKnown RBP7.72□□□□□ -1.17
SNX27-205ENST00000482791 NUDT12Q9BQG2 462 aa7.72□□□□□ -1.17
SNX27-205ENST00000482791 KRTAP4-8Q9BYQ9 185 aa7.72□□□□□ -1.17
SNX27-205ENST00000482791 HOXA2O43364 376 aa7.71□□□□□ -1.18
SNX27-205ENST00000482791 LINC01559Q495D7 138 aa7.71□□□□□ -1.18
SNX27-205ENST00000482791 SSTR3P32745 418 aaPredicted RBP7.7□□□□□ -1.18
SNX27-205ENST00000482791 WDR4P57081 412 aaKnown RBP7.7□□□□□ -1.18
SNX27-205ENST00000482791 USP46P62068 366 aa7.7□□□□□ -1.18
SNX27-205ENST00000482791 WHAMMQ8TF30 809 aa7.7□□□□□ -1.18
SNX27-205ENST00000482791 BAP1Q92560 729 aa7.7□□□□□ -1.18
SNX27-205ENST00000482791 ZNF385CQ66K41 422 aaPredicted RBP7.69□□□□□ -1.18
SNX27-205ENST00000482791 CNTNAP3BQ96NU0 1288 aa7.69□□□□□ -1.18
SNX27-205ENST00000482791 CNTNAP3Q9BZ76 1288 aa7.69□□□□□ -1.18
SNX27-205ENST00000482791 ZFAND3Q9H8U3 227 aa7.69□□□□□ -1.18
SNX27-205ENST00000482791 SCARF1Q14162 830 aa7.68□□□□□ -1.18
SNX27-205ENST00000482791 DIXDC1Q155Q3 683 aa7.68□□□□□ -1.18
SNX27-205ENST00000482791 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.67□□□□□ -1.18
SNX27-205ENST00000482791 RNFT1Q5M7Z0 435 aa7.67□□□□□ -1.18
SNX27-205ENST00000482791 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
SNX27-205ENST00000482791 IRS1P35568 1242 aa7.66□□□□□ -1.18
SNX27-205ENST00000482791 UNC93B1Q9H1C4 597 aa7.66□□□□□ -1.18
SNX27-205ENST00000482791 DNMT3LQ9UJW3 386 aa7.66□□□□□ -1.18
SNX27-205ENST00000482791 PCDHGC3Q9UN70 934 aa7.66□□□□□ -1.18
SNX27-205ENST00000482791 MAN1A2O60476 641 aa7.65□□□□□ -1.18
SNX27-205ENST00000482791 ADH1CP00326 375 aa7.65□□□□□ -1.18
SNX27-205ENST00000482791 NR3C2P08235 984 aa7.65□□□□□ -1.18
SNX27-205ENST00000482791 MS4A1P11836 297 aa7.65□□□□□ -1.18
SNX27-205ENST00000482791 ITPKCQ96DU7 683 aa7.65□□□□□ -1.18
SNX27-205ENST00000482791 ARHGEF15O94989 841 aa7.64□□□□□ -1.19
SNX27-205ENST00000482791 NUTM1Q86Y26 1132 aa7.64□□□□□ -1.19
SNX27-205ENST00000482791 MPNDQ8N594 471 aa7.64□□□□□ -1.19
SNX27-205ENST00000482791 BEGAINQ9BUH8 593 aa7.64□□□□□ -1.19
SNX27-205ENST00000482791 CCNYL3P0C7X3 344 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 GJA5P36382 358 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 RETREG3Q86VR2 466 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 ZNF511Q8NB15 262 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 COL25A1Q9BXS0 654 aaPredicted RBP7.63□□□□□ -1.19
SNX27-205ENST00000482791 KRTAP9-2Q9BYQ4 174 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 KDM4CQ9H3R0 1056 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 EVA1BQ9NVM1 165 aa7.63□□□□□ -1.19
SNX27-205ENST00000482791 DNMT3AQ9Y6K1 912 aaPredicted RBP7.63□□□□□ -1.19
SNX27-205ENST00000482791 ZIC2O95409 532 aaPredicted RBP7.62□□□□□ -1.19
SNX27-205ENST00000482791 ITGB2P05107 769 aa7.62□□□□□ -1.19
SNX27-205ENST00000482791 DDRGK1Q96HY6 314 aa7.62□□□□□ -1.19
SNX27-205ENST00000482791 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
SNX27-205ENST00000482791 SPIRE2Q8WWL2 714 aa7.61□□□□□ -1.19
SNX27-205ENST00000482791 KRTAP9-6A0A140TA67 174 aa7.6□□□□□ -1.19
SNX27-205ENST00000482791 VARSP26640 1264 aaKnown RBP7.6□□□□□ -1.19
SNX27-205ENST00000482791 GPBP1L1Q9HC44 474 aaPredicted RBP7.6□□□□□ -1.19
SNX27-205ENST00000482791 GRM5P41594 1212 aa7.59□□□□□ -1.19
SNX27-205ENST00000482791 TBC1D2Q9BYX2 928 aa7.59□□□□□ -1.19
SNX27-205ENST00000482791 RSPH6AQ9H0K4 717 aa7.59□□□□□ -1.19
SNX27-205ENST00000482791 PLEKHG3A1L390 1219 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 RNF225M0QZC1 329 aaPredicted RBP7.58□□□□□ -1.2
SNX27-205ENST00000482791 IGHA1P01876 353 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 BRPF1P55201 1214 aaPredicted RBP7.58□□□□□ -1.2
SNX27-205ENST00000482791 KCNH2Q12809 1159 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 NEUROD2Q15784 382 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 TUSC1Q2TAM9 212 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 CDK15Q96Q40 435 aa7.58□□□□□ -1.2
SNX27-205ENST00000482791 ADAM23O75077 832 aa7.57□□□□□ -1.2
SNX27-205ENST00000482791 SLURP2P0DP57 97 aa7.57□□□□□ -1.2
SNX27-205ENST00000482791 FDX1P10109 184 aa7.57□□□□□ -1.2
SNX27-205ENST00000482791 PRKCSHP14314 528 aaPredicted RBP7.57□□□□□ -1.2
SNX27-205ENST00000482791 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
SNX27-205ENST00000482791 SVOPQ8N4V2 548 aa7.57□□□□□ -1.2
SNX27-205ENST00000482791 MOXD2PA6NHM9 499 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 SPTLC1O15269 473 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 BMP2P12643 396 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 PTSQ03393 145 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 PTPRNQ16849 979 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
SNX27-205ENST00000482791 LINC00528Q8N1L1 170 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 MEIOBQ8N635 442 aa7.56□□□□□ -1.2
SNX27-205ENST00000482791 MYSM1Q5VVJ2 828 aa7.55□□□□□ -1.2
SNX27-205ENST00000482791 FAM117AQ9C073 453 aa7.55□□□□□ -1.2
SNX27-205ENST00000482791 SPDYE5A6NIY4 337 aa7.54□□□□□ -1.2
SNX27-205ENST00000482791 C6orf229H3BNL8 230 aa7.54□□□□□ -1.2
SNX27-205ENST00000482791 ARID5BQ14865 1188 aa7.54□□□□□ -1.2
SNX27-205ENST00000482791 SH3D19Q5HYK7 790 aa7.54□□□□□ -1.2
SNX27-205ENST00000482791 PRPF38BQ5VTL8 546 aaKnown RBP7.54□□□□□ -1.2
SNX27-205ENST00000482791 NANOS1Q8WY41 292 aaKnown RBP7.54□□□□□ -1.2
SNX27-205ENST00000482791 GOPCQ9HD26 462 aa7.54□□□□□ -1.2
SNX27-205ENST00000482791 NDUFV2P19404 249 aa7.52□□□□□ -1.21
SNX27-205ENST00000482791 LYPD4Q6UWN0 246 aa7.52□□□□□ -1.21
SNX27-205ENST00000482791 RIC3Q7Z5B4 369 aa7.52□□□□□ -1.21
SNX27-205ENST00000482791 CLK2P49760 499 aaKnown RBP7.51□□□□□ -1.21
SNX27-205ENST00000482791 SKIV2LQ15477 1246 aaKnown RBP7.51□□□□□ -1.21
SNX27-205ENST00000482791 PLA2G4EQ3MJ16 856 aa7.51□□□□□ -1.21
SNX27-205ENST00000482791 VWA5B2Q8N398 1253 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms