RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 MAP10Q9P2G4 905 aa8.46□□□□□ -1.06
GTF3A-207ENST00000482655 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
GTF3A-207ENST00000482655 SNIP1Q8TAD8 396 aaKnown RBP8.45□□□□□ -1.06
GTF3A-207ENST00000482655 BAP1Q92560 729 aa8.45□□□□□ -1.06
GTF3A-207ENST00000482655 PCMTD1Q96MG8 357 aaPredicted RBP8.45□□□□□ -1.06
GTF3A-207ENST00000482655 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.45□□□□□ -1.06
GTF3A-207ENST00000482655 TOR4AQ9NXH8 423 aa8.45□□□□□ -1.06
GTF3A-207ENST00000482655 F12P00748 615 aaPredicted RBP8.44□□□□□ -1.06
GTF3A-207ENST00000482655 ZNF511Q8NB15 262 aa8.44□□□□□ -1.06
GTF3A-207ENST00000482655 GOPCQ9HD26 462 aa8.44□□□□□ -1.06
GTF3A-207ENST00000482655 SH3BP2P78314 561 aa8.43□□□□□ -1.06
GTF3A-207ENST00000482655 ARMC2Q8NEN0 867 aa8.42□□□□□ -1.06
GTF3A-207ENST00000482655 LCE2BO14633 110 aa8.41□□□□□ -1.06
GTF3A-207ENST00000482655 AP1G2O75843 785 aa8.41□□□□□ -1.06
GTF3A-207ENST00000482655 CTDSPL2Q05D32 466 aa8.41□□□□□ -1.06
GTF3A-207ENST00000482655 AGERQ15109 404 aa8.41□□□□□ -1.06
GTF3A-207ENST00000482655 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
GTF3A-207ENST00000482655 ALDH1A1P00352 501 aa8.4□□□□□ -1.06
GTF3A-207ENST00000482655 MYT1Q01538 1121 aa8.4□□□□□ -1.06
GTF3A-207ENST00000482655 NBPF14Q5TI25 921 aa8.4□□□□□ -1.06
GTF3A-207ENST00000482655 PRKCSHP14314 528 aaPredicted RBP8.39□□□□□ -1.07
GTF3A-207ENST00000482655 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
GTF3A-207ENST00000482655 J3QL48 77 aa8.38□□□□□ -1.07
GTF3A-207ENST00000482655 SMPD1P17405 629 aa8.38□□□□□ -1.07
GTF3A-207ENST00000482655 BPHLQ86WA6 291 aaPredicted RBP8.38□□□□□ -1.07
GTF3A-207ENST00000482655 WASF2Q9Y6W5 498 aa8.38□□□□□ -1.07
GTF3A-207ENST00000482655 RFC5P40937 340 aa8.37□□□□□ -1.07
GTF3A-207ENST00000482655 CTC1Q2NKJ3 1217 aa8.37□□□□□ -1.07
GTF3A-207ENST00000482655 FBXO31Q5XUX0 539 aaPredicted RBP8.37□□□□□ -1.07
GTF3A-207ENST00000482655 FAM174AQ8TBP5 190 aa8.37□□□□□ -1.07
GTF3A-207ENST00000482655 LRRN4Q8WUT4 740 aa8.37□□□□□ -1.07
GTF3A-207ENST00000482655 AXIN1O15169 862 aa8.36□□□□□ -1.07
GTF3A-207ENST00000482655 ST8SIA5O15466 376 aa8.36□□□□□ -1.07
GTF3A-207ENST00000482655 SIAH2O43255 324 aa8.36□□□□□ -1.07
GTF3A-207ENST00000482655 AVPP01185 164 aa8.36□□□□□ -1.07
GTF3A-207ENST00000482655 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 CRIPAKQ8N1N5 446 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 GPKOWQ92917 476 aaPredicted RBP eCLIP8.35□□□□□ -1.07
GTF3A-207ENST00000482655 FOXJ1Q92949 421 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 AAASQ9NRG9 546 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
GTF3A-207ENST00000482655 TMEM259Q4ZIN3 620 aa8.34□□□□□ -1.07
GTF3A-207ENST00000482655 NR6A1Q15406 480 aa8.33□□□□□ -1.08
GTF3A-207ENST00000482655 HPS1Q92902 700 aa8.33□□□□□ -1.08
GTF3A-207ENST00000482655 FKBPLQ9UIM3 349 aa8.33□□□□□ -1.08
GTF3A-207ENST00000482655 MAGEB6P1A0A0J9YX57 407 aa8.32□□□□□ -1.08
GTF3A-207ENST00000482655 SMCPP49901 116 aaPredicted RBP8.32□□□□□ -1.08
GTF3A-207ENST00000482655 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
GTF3A-207ENST00000482655 ZNF787Q6DD87 383 aa8.32□□□□□ -1.08
GTF3A-207ENST00000482655 MPNDQ8N594 471 aa8.31□□□□□ -1.08
GTF3A-207ENST00000482655 CARD14Q9BXL6 1004 aa8.31□□□□□ -1.08
GTF3A-207ENST00000482655 ZC3H4Q9UPT8 1303 aaKnown RBP8.3□□□□□ -1.08
GTF3A-207ENST00000482655 C4orf48Q5BLP8 95 aa8.3□□□□□ -1.08
GTF3A-207ENST00000482655 SH3BP5LQ7L8J4 393 aa8.3□□□□□ -1.08
GTF3A-207ENST00000482655 ADH1CP00326 375 aa8.29□□□□□ -1.08
GTF3A-207ENST00000482655 PDXDC2PQ6P474 469 aa8.29□□□□□ -1.08
GTF3A-207ENST00000482655 SH3RF1Q7Z6J0 888 aa8.29□□□□□ -1.08
GTF3A-207ENST00000482655 ARHGAP9Q9BRR9 750 aa8.29□□□□□ -1.08
GTF3A-207ENST00000482655 HMX1Q9NP08 348 aaPredicted RBP8.29□□□□□ -1.08
GTF3A-207ENST00000482655 NNTQ13423 1086 aa8.28□□□□□ -1.08
GTF3A-207ENST00000482655 PTK2Q05397 1052 aa8.27□□□□□ -1.09
GTF3A-207ENST00000482655 ZBTB33Q86T24 672 aa8.27□□□□□ -1.09
GTF3A-207ENST00000482655 CDK15Q96Q40 435 aa8.27□□□□□ -1.09
GTF3A-207ENST00000482655 CAPN5O15484 640 aaPredicted RBP8.26□□□□□ -1.09
GTF3A-207ENST00000482655 VASH1Q7L8A9 365 aaPredicted RBP8.26□□□□□ -1.09
GTF3A-207ENST00000482655 EPS8L1Q8TE68 723 aa8.26□□□□□ -1.09
GTF3A-207ENST00000482655 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
GTF3A-207ENST00000482655 C1QTNF2Q9BXJ5 285 aa8.26□□□□□ -1.09
GTF3A-207ENST00000482655 DACH1Q9UI36 760 aa8.26□□□□□ -1.09
GTF3A-207ENST00000482655 APBB1O00213 710 aa8.25□□□□□ -1.09
GTF3A-207ENST00000482655 NR5A1Q13285 461 aa8.25□□□□□ -1.09
GTF3A-207ENST00000482655 TRMT44Q8IYL2 757 aaKnown RBP8.25□□□□□ -1.09
GTF3A-207ENST00000482655 ATP13A2Q9NQ11 1180 aa8.25□□□□□ -1.09
GTF3A-207ENST00000482655 GPSM3Q9Y4H4 160 aa8.25□□□□□ -1.09
GTF3A-207ENST00000482655 MAP4K5Q9Y4K4 846 aa8.25□□□□□ -1.09
GTF3A-207ENST00000482655 FSHRP23945 695 aa8.24□□□□□ -1.09
GTF3A-207ENST00000482655 WDR4P57081 412 aaKnown RBP8.24□□□□□ -1.09
GTF3A-207ENST00000482655 ERFEQ4G0M1 354 aa8.24□□□□□ -1.09
GTF3A-207ENST00000482655 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
GTF3A-207ENST00000482655 C11orf95C9JLR9 678 aaPredicted RBP8.23□□□□□ -1.09
GTF3A-207ENST00000482655 TRIM34Q9BYJ4 488 aa8.23□□□□□ -1.09
GTF3A-207ENST00000482655 SENP2Q9HC62 589 aa8.23□□□□□ -1.09
GTF3A-207ENST00000482655 GMPR2Q9P2T1 348 aaKnown RBP8.23□□□□□ -1.09
GTF3A-207ENST00000482655 CDV3Q9UKY7 258 aaKnown RBP8.23□□□□□ -1.09
GTF3A-207ENST00000482655 POTECB2RU33 542 aa8.22□□□□□ -1.09
GTF3A-207ENST00000482655 GRM5P41594 1212 aa8.21□□□□□ -1.1
GTF3A-207ENST00000482655 ADAM32Q8TC27 787 aa8.21□□□□□ -1.1
GTF3A-207ENST00000482655 ZIC2O95409 532 aaPredicted RBP8.2□□□□□ -1.1
GTF3A-207ENST00000482655 NR3C2P08235 984 aa8.2□□□□□ -1.1
GTF3A-207ENST00000482655 BMP1P13497 986 aa8.2□□□□□ -1.1
GTF3A-207ENST00000482655 TIMP2P16035 220 aa8.2□□□□□ -1.1
GTF3A-207ENST00000482655 KIFC2Q96AC6 838 aa8.2□□□□□ -1.1
GTF3A-207ENST00000482655 SOCS7O14512 581 aa8.19□□□□□ -1.1
GTF3A-207ENST00000482655 NBPF20Q3BBV1 942 aa8.19□□□□□ -1.1
GTF3A-207ENST00000482655 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
GTF3A-207ENST00000482655 CCDC116Q8IYX3 515 aa8.19□□□□□ -1.1
GTF3A-207ENST00000482655 GJD4Q96KN9 370 aaPredicted RBP8.19□□□□□ -1.1
GTF3A-207ENST00000482655 KCTD15Q96SI1 283 aaPredicted RBP8.19□□□□□ -1.1
GTF3A-207ENST00000482655 NDUFB9Q9Y6M9 179 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms