RNA–Protein interactions for RNA: ENST00000482623.5

FAM3D-202, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-202ENST00000482623 CCDC9Q9Y3X0 531 aaKnown RBP17.42■□□□□ 0.38
FAM3D-202ENST00000482623 ACEP12821 1306 aa17.42■□□□□ 0.38
FAM3D-202ENST00000482623 CENPJQ9HC77 1338 aaPredicted RBP17.42■□□□□ 0.38
FAM3D-202ENST00000482623 GLI3P10071 1580 aa17.41■□□□□ 0.38
FAM3D-202ENST00000482623 L3MBTL2Q969R5 705 aa17.41■□□□□ 0.38
FAM3D-202ENST00000482623 TRPM3Q9HCF6 1732 aaPredicted RBP17.41■□□□□ 0.38
FAM3D-202ENST00000482623 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
FAM3D-202ENST00000482623 PRDM11Q9NQV5 511 aa17.4■□□□□ 0.38
FAM3D-202ENST00000482623 SPATA31A5Q5VU36 1347 aa17.4■□□□□ 0.38
FAM3D-202ENST00000482623 SPATA31A7Q8IWB4 1347 aa17.4■□□□□ 0.38
FAM3D-202ENST00000482623 ALS2Q96Q42 1657 aa17.39■□□□□ 0.37
FAM3D-202ENST00000482623 ARHGEF28Q8N1W1 1705 aaKnown RBP17.39■□□□□ 0.37
FAM3D-202ENST00000482623 SRPK2P78362 688 aaKnown RBP17.37■□□□□ 0.37
FAM3D-202ENST00000482623 NLRP13Q86W25 1043 aa17.37■□□□□ 0.37
FAM3D-202ENST00000482623 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
FAM3D-202ENST00000482623 COL14A1Q05707 1796 aaKnown RBP17.36■□□□□ 0.37
FAM3D-202ENST00000482623 ITSN1Q15811 1721 aa17.35■□□□□ 0.37
FAM3D-202ENST00000482623 PLEKHG5O94827 1062 aa17.35■□□□□ 0.37
FAM3D-202ENST00000482623 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
FAM3D-202ENST00000482623 ZNF692Q9BU19 519 aaPredicted RBP17.35■□□□□ 0.37
FAM3D-202ENST00000482623 CPDO75976 1380 aa17.35■□□□□ 0.37
FAM3D-202ENST00000482623 SRCAPQ6ZRS2 3230 aa17.34■□□□□ 0.37
FAM3D-202ENST00000482623 EVC2Q86UK5 1308 aa17.34■□□□□ 0.37
FAM3D-202ENST00000482623 KIAA0232Q92628 1395 aa17.34■□□□□ 0.37
FAM3D-202ENST00000482623 ABCA3Q99758 1704 aa17.34■□□□□ 0.37
FAM3D-202ENST00000482623 PLCH1Q4KWH8 1693 aa17.33■□□□□ 0.37
FAM3D-202ENST00000482623 USP19O94966 1318 aa17.33■□□□□ 0.36
FAM3D-202ENST00000482623 SPATA31A1Q5TZJ5 1347 aa17.33■□□□□ 0.36
FAM3D-202ENST00000482623 BARGINQ6ZT62 677 aa17.33■□□□□ 0.36
FAM3D-202ENST00000482623 GCP02774 474 aa17.32■□□□□ 0.36
FAM3D-202ENST00000482623 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
FAM3D-202ENST00000482623 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
FAM3D-202ENST00000482623 C11orf95C9JLR9 678 aaPredicted RBP17.31■□□□□ 0.36
FAM3D-202ENST00000482623 EVA1CP58658 441 aa17.31■□□□□ 0.36
FAM3D-202ENST00000482623 SIN3AQ96ST3 1273 aa17.31■□□□□ 0.36
FAM3D-202ENST00000482623 CABP1Q9NZU7 370 aa17.31■□□□□ 0.36
FAM3D-202ENST00000482623 THRAP3Q9Y2W1 955 aaKnown RBP17.31■□□□□ 0.36
FAM3D-202ENST00000482623 A0A0G2JS52 829 aa17.3■□□□□ 0.36
FAM3D-202ENST00000482623 BAG6P46379 1132 aa17.3■□□□□ 0.36
FAM3D-202ENST00000482623 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
FAM3D-202ENST00000482623 MYT1Q01538 1121 aa17.3■□□□□ 0.36
FAM3D-202ENST00000482623 FAM196AQ6ZSG2 479 aa17.29■□□□□ 0.36
FAM3D-202ENST00000482623 ROCK2O75116 1388 aaKnown RBP17.28■□□□□ 0.36
FAM3D-202ENST00000482623 NRAPQ86VF7 1730 aa17.28■□□□□ 0.36
FAM3D-202ENST00000482623 NEUROD1Q13562 356 aa17.28■□□□□ 0.36
FAM3D-202ENST00000482623 TOPAZ1Q8N9V7 1692 aa17.28■□□□□ 0.36
FAM3D-202ENST00000482623 CRYBG1Q9Y4K1 1723 aa17.27■□□□□ 0.36
FAM3D-202ENST00000482623 SLC24A1O60721 1099 aa17.27■□□□□ 0.36
FAM3D-202ENST00000482623 CHRNA2Q15822 529 aa17.27■□□□□ 0.36
FAM3D-202ENST00000482623 NUTM2GQ5VZR2 741 aa17.27■□□□□ 0.36
FAM3D-202ENST00000482623 DEFB132Q7Z7B7 95 aa17.27■□□□□ 0.36
FAM3D-202ENST00000482623 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
FAM3D-202ENST00000482623 PUS7Q96PZ0 661 aaKnown RBP17.26■□□□□ 0.35
FAM3D-202ENST00000482623 USP6P35125 1406 aa17.26■□□□□ 0.35
FAM3D-202ENST00000482623 SSH2Q76I76 1423 aa17.26■□□□□ 0.35
FAM3D-202ENST00000482623 SBNO2Q9Y2G9 1366 aa17.26■□□□□ 0.35
FAM3D-202ENST00000482623 NLRP6P59044 892 aa17.25■□□□□ 0.35
FAM3D-202ENST00000482623 STRN4Q9NRL3 753 aa17.25■□□□□ 0.35
FAM3D-202ENST00000482623 AATKQ6ZMQ8 1374 aa17.25■□□□□ 0.35
FAM3D-202ENST00000482623 TTC21AQ8NDW8 1320 aa17.24■□□□□ 0.35
FAM3D-202ENST00000482623 DISP2A7MBM2 1401 aa17.24■□□□□ 0.35
FAM3D-202ENST00000482623 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
FAM3D-202ENST00000482623 BRWD3Q6RI45 1802 aa17.24■□□□□ 0.35
FAM3D-202ENST00000482623 PDE3BQ13370 1112 aa17.23■□□□□ 0.35
FAM3D-202ENST00000482623 LARP1Q6PKG0 1096 aaKnown RBP17.22■□□□□ 0.35
FAM3D-202ENST00000482623 THSD7AQ9UPZ6 1657 aa17.21■□□□□ 0.35
FAM3D-202ENST00000482623 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
FAM3D-202ENST00000482623 TTC21BQ7Z4L5 1316 aa17.21■□□□□ 0.34
FAM3D-202ENST00000482623 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
FAM3D-202ENST00000482623 CDCA7Q9BWT1 371 aaPredicted RBP17.2■□□□□ 0.34
FAM3D-202ENST00000482623 TRPM1Q7Z4N2 1603 aa17.2■□□□□ 0.34
FAM3D-202ENST00000482623 PHRF1Q9P1Y6 1649 aaKnown RBP17.2■□□□□ 0.34
FAM3D-202ENST00000482623 CPSF1Q10570 1443 aaKnown RBP17.2■□□□□ 0.34
FAM3D-202ENST00000482623 CARD11Q9BXL7 1154 aa17.19■□□□□ 0.34
FAM3D-202ENST00000482623 QRICH2Q9H0J4 1663 aa17.18■□□□□ 0.34
FAM3D-202ENST00000482623 ARHGEF25Q86VW2 580 aa17.18■□□□□ 0.34
FAM3D-202ENST00000482623 CRB1P82279 1406 aa17.18■□□□□ 0.34
FAM3D-202ENST00000482623 NRKQ7Z2Y5 1582 aa17.18■□□□□ 0.34
FAM3D-202ENST00000482623 EN1Q05925 392 aaPredicted RBP17.17■□□□□ 0.34
FAM3D-202ENST00000482623 CAMKK2Q96RR4 588 aa17.17■□□□□ 0.34
FAM3D-202ENST00000482623 USP35Q9P2H5 1018 aa17.17■□□□□ 0.34
FAM3D-202ENST00000482623 SLIT3O75094 1523 aa17.16■□□□□ 0.34
FAM3D-202ENST00000482623 COL5A2P05997 1499 aaPredicted RBP17.16■□□□□ 0.34
FAM3D-202ENST00000482623 LMO7Q8WWI1 1683 aa17.16■□□□□ 0.34
FAM3D-202ENST00000482623 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
FAM3D-202ENST00000482623 FAM182BQ5T319 152 aa17.15■□□□□ 0.34
FAM3D-202ENST00000482623 KTN1Q86UP2 1357 aaKnown RBP17.15■□□□□ 0.34
FAM3D-202ENST00000482623 TRIM37O94972 964 aa17.14■□□□□ 0.33
FAM3D-202ENST00000482623 APBA3O96018 575 aa17.14■□□□□ 0.33
FAM3D-202ENST00000482623 WDR17Q8IZU2 1322 aa17.14■□□□□ 0.33
FAM3D-202ENST00000482623 USP31Q70CQ4 1352 aa17.14■□□□□ 0.33
FAM3D-202ENST00000482623 TRIM26Q12899 539 aaPredicted RBP17.13■□□□□ 0.33
FAM3D-202ENST00000482623 TOM1L2Q6ZVM7 507 aa17.13■□□□□ 0.33
FAM3D-202ENST00000482623 CARD10Q9BWT7 1032 aa17.13■□□□□ 0.33
FAM3D-202ENST00000482623 HDGFL2Q7Z4V5 671 aaPredicted RBP17.12■□□□□ 0.33
FAM3D-202ENST00000482623 TERF2IPQ9NYB0 399 aa17.12■□□□□ 0.33
FAM3D-202ENST00000482623 AXIN2Q9Y2T1 843 aa17.12■□□□□ 0.33
FAM3D-202ENST00000482623 RGPD1P0DJD0 1748 aa17.12■□□□□ 0.33
FAM3D-202ENST00000482623 DDB1Q16531 1140 aa17.11■□□□□ 0.33
FAM3D-202ENST00000482623 BCL9O00512 1426 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms