RNA–Protein interactions for RNA: ENST00000482462.1

PDGFA-206, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best)

Gene PDGFA, Length 1,770 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-206ENST00000482462 CC2D1BQ5T0F9 858 aaKnown RBP25.35■■□□□ 1.65
PDGFA-206ENST00000482462 DCCP43146 1447 aa25.35■■□□□ 1.65
PDGFA-206ENST00000482462 CNGB1Q14028 1251 aaPredicted RBP25.34■■□□□ 1.65
PDGFA-206ENST00000482462 C19orf44Q9H6X5 657 aa25.34■■□□□ 1.65
PDGFA-206ENST00000482462 CGNL1Q0VF96 1302 aa25.33■■□□□ 1.65
PDGFA-206ENST00000482462 LRRC7Q96NW7 1537 aa25.33■■□□□ 1.65
PDGFA-206ENST00000482462 B4GALNT3Q6L9W6 998 aa25.33■■□□□ 1.65
PDGFA-206ENST00000482462 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.65
PDGFA-206ENST00000482462 MYBBP1AQ9BQG0 1328 aaKnown RBP25.33■■□□□ 1.64
PDGFA-206ENST00000482462 NSD2O96028 1365 aa25.32■■□□□ 1.64
PDGFA-206ENST00000482462 ZNF692Q9BU19 519 aaPredicted RBP25.32■■□□□ 1.64
PDGFA-206ENST00000482462 ANKRD26Q9UPS8 1709 aa25.31■■□□□ 1.64
PDGFA-206ENST00000482462 EDC4Q6P2E9 1401 aaKnown RBP25.31■■□□□ 1.64
PDGFA-206ENST00000482462 INSRP06213 1382 aa25.3■■□□□ 1.64
PDGFA-206ENST00000482462 NRKQ7Z2Y5 1582 aa25.29■■□□□ 1.64
PDGFA-206ENST00000482462 POLR3AO14802 1390 aaPredicted RBP25.29■■□□□ 1.64
PDGFA-206ENST00000482462 ACEP12821 1306 aa25.28■■□□□ 1.64
PDGFA-206ENST00000482462 IQSEC2Q5JU85 1478 aa25.28■■□□□ 1.64
PDGFA-206ENST00000482462 MSH6P52701 1360 aa25.28■■□□□ 1.64
PDGFA-206ENST00000482462 ERICH6Q7L0X2 663 aa25.26■■□□□ 1.63
PDGFA-206ENST00000482462 ATF3P18847 181 aa25.25■■□□□ 1.63
PDGFA-206ENST00000482462 USP6P35125 1406 aa25.25■■□□□ 1.63
PDGFA-206ENST00000482462 CADPS2Q86UW7 1296 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 PMFBP1Q8TBY8 1022 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 KIF1AQ12756 1690 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 C1orf167Q5SNV9 1468 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 NGDNQ8NEJ9 315 aaKnown RBP25.23■■□□□ 1.63
PDGFA-206ENST00000482462 PHF8Q9UPP1 1060 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 MST1RQ04912 1400 aa25.23■■□□□ 1.63
PDGFA-206ENST00000482462 NLRP13Q86W25 1043 aa25.22■■□□□ 1.63
PDGFA-206ENST00000482462 FYB1O15117 783 aa25.21■■□□□ 1.63
PDGFA-206ENST00000482462 SSH2Q76I76 1423 aa25.2■■□□□ 1.62
PDGFA-206ENST00000482462 MORC1Q86VD1 984 aa25.2■■□□□ 1.62
PDGFA-206ENST00000482462 ESCO1Q5FWF5 840 aa25.19■■□□□ 1.62
PDGFA-206ENST00000482462 PDE3BQ13370 1112 aa25.18■■□□□ 1.62
PDGFA-206ENST00000482462 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.18■■□□□ 1.62
PDGFA-206ENST00000482462 PPP2R1AP30153 589 aa25.18■■□□□ 1.62
PDGFA-206ENST00000482462 TTC21BQ7Z4L5 1316 aa25.17■■□□□ 1.62
PDGFA-206ENST00000482462 GGNBP2Q9H3C7 697 aa25.17■■□□□ 1.62
PDGFA-206ENST00000482462 CCDC136Q96JN2 1154 aa25.16■■□□□ 1.62
PDGFA-206ENST00000482462 TTC21AQ8NDW8 1320 aa25.16■■□□□ 1.62
PDGFA-206ENST00000482462 ORAI2Q96SN7 254 aa25.14■■□□□ 1.62
PDGFA-206ENST00000482462 UBAP1LF5GYI3 381 aa25.13■■□□□ 1.61
PDGFA-206ENST00000482462 NME9Q86XW9 330 aa25.12■■□□□ 1.61
PDGFA-206ENST00000482462 PIK3C2AO00443 1686 aa25.11■■□□□ 1.61
PDGFA-206ENST00000482462 USP54Q70EL1 1684 aa25.11■■□□□ 1.61
PDGFA-206ENST00000482462 OVOS2A0A0J9YW53 1432 aa25.08■■□□□ 1.61
PDGFA-206ENST00000482462 OVOS2Q6IE36 1432 aa25.08■■□□□ 1.61
PDGFA-206ENST00000482462 COG3Q96JB2 828 aa25.08■■□□□ 1.61
PDGFA-206ENST00000482462 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
PDGFA-206ENST00000482462 RRP1P56182 461 aaKnown RBP25.08■■□□□ 1.6
PDGFA-206ENST00000482462 PSME1Q06323 249 aa25.08■■□□□ 1.6
PDGFA-206ENST00000482462 TRPM3Q9HCF6 1732 aaPredicted RBP25.07■■□□□ 1.6
PDGFA-206ENST00000482462 MAP2P11137 1827 aaKnown RBP25.07■■□□□ 1.6
PDGFA-206ENST00000482462 USP31Q70CQ4 1352 aa25.06■■□□□ 1.6
PDGFA-206ENST00000482462 TNNT2P45379 298 aaPredicted RBP25.06■■□□□ 1.6
PDGFA-206ENST00000482462 FOXO3O43524 673 aa25.05■■□□□ 1.6
PDGFA-206ENST00000482462 NOP58Q9Y2X3 529 aaKnown RBP25.05■■□□□ 1.6
PDGFA-206ENST00000482462 SLAIN2Q9P270 581 aa25.04■■□□□ 1.6
PDGFA-206ENST00000482462 ZRANB1Q9UGI0 708 aa25.04■■□□□ 1.6
PDGFA-206ENST00000482462 MARF1Q9Y4F3 1742 aaKnown RBP25.04■■□□□ 1.6
PDGFA-206ENST00000482462 AATKQ6ZMQ8 1374 aa25.02■■□□□ 1.6
PDGFA-206ENST00000482462 BCL11AQ9H165 835 aa25.02■■□□□ 1.6
PDGFA-206ENST00000482462 NPHP3Q7Z494 1330 aa25.01■■□□□ 1.59
PDGFA-206ENST00000482462 RCAN3Q9UKA8 241 aa25.01■■□□□ 1.59
PDGFA-206ENST00000482462 TOM1O60784 492 aa25■■□□□ 1.59
PDGFA-206ENST00000482462 PAK3O75914 559 aaPredicted RBP25■■□□□ 1.59
PDGFA-206ENST00000482462 MTHFSP49914 203 aa25■■□□□ 1.59
PDGFA-206ENST00000482462 BRINP3Q76B58 766 aa25■■□□□ 1.59
PDGFA-206ENST00000482462 KRT28Q7Z3Y7 464 aa25■■□□□ 1.59
PDGFA-206ENST00000482462 ABTB2Q8N961 1025 aa24.99■■□□□ 1.59
PDGFA-206ENST00000482462 ALS2Q96Q42 1657 aa24.99■■□□□ 1.59
PDGFA-206ENST00000482462 ANP32AP39687 249 aaKnown RBP24.98■■□□□ 1.59
PDGFA-206ENST00000482462 NLRP6P59044 892 aa24.97■■□□□ 1.59
PDGFA-206ENST00000482462 CFAP53Q96M91 514 aa24.97■■□□□ 1.59
PDGFA-206ENST00000482462 PIP4K2BP78356 416 aa24.96■■□□□ 1.59
PDGFA-206ENST00000482462 PXDNQ92626 1479 aa24.96■■□□□ 1.59
PDGFA-206ENST00000482462 SBNO1A3KN83 1393 aa24.96■■□□□ 1.59
PDGFA-206ENST00000482462 NHSL1Q5SYE7 1610 aa24.96■■□□□ 1.59
PDGFA-206ENST00000482462 SHPRHQ149N8 1683 aa24.95■■□□□ 1.59
PDGFA-206ENST00000482462 TCERG1O14776 1098 aaKnown RBP24.95■■□□□ 1.59
PDGFA-206ENST00000482462 XPCQ01831 940 aaPredicted RBP24.95■■□□□ 1.58
PDGFA-206ENST00000482462 IPO9Q96P70 1041 aaKnown RBP24.95■■□□□ 1.58
PDGFA-206ENST00000482462 POLKQ9UBT6 870 aa24.94■■□□□ 1.58
PDGFA-206ENST00000482462 PNPLA6Q8IY17 1366 aa24.92■■□□□ 1.58
PDGFA-206ENST00000482462 COL3A1P02461 1466 aaPredicted RBP24.92■■□□□ 1.58
PDGFA-206ENST00000482462 CDK12Q9NYV4 1490 aaPredicted RBP24.92■■□□□ 1.58
PDGFA-206ENST00000482462 MS4A1P11836 297 aa24.91■■□□□ 1.58
PDGFA-206ENST00000482462 FBLN1P23142 703 aa24.9■■□□□ 1.58
PDGFA-206ENST00000482462 WDR43Q15061 677 aaKnown RBP eCLIP24.9■■□□□ 1.58
PDGFA-206ENST00000482462 DDX17Q92841 729 aaKnown RBP24.9■■□□□ 1.58
PDGFA-206ENST00000482462 ROBO1Q9Y6N7 1651 aa24.9■■□□□ 1.58
PDGFA-206ENST00000482462 TNS3Q68CZ2 1445 aa24.9■■□□□ 1.58
PDGFA-206ENST00000482462 NUTM2GQ5VZR2 741 aa24.9■■□□□ 1.58
PDGFA-206ENST00000482462 SLIT3O75094 1523 aa24.89■■□□□ 1.58
PDGFA-206ENST00000482462 EMILIN1Q9Y6C2 1016 aa24.88■■□□□ 1.57
PDGFA-206ENST00000482462 SOS2Q07890 1332 aaPredicted RBP24.88■■□□□ 1.57
PDGFA-206ENST00000482462 RRS1Q15050 365 aaKnown RBP24.88■■□□□ 1.57
PDGFA-206ENST00000482462 EXOC6Q8TAG9 804 aa24.87■■□□□ 1.57
PDGFA-206ENST00000482462 NFAT5O94916 1531 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms