RNA–Protein interactions for RNA: ENST00000482460.1

CYTH3-208, Transcript of cytohesin 3, human

TSL 3

Gene CYTH3, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYTH3-208	ENST00000482460	POLR3A	O14802	1390 aa	Predicted RBP	32.54	■■■□□ 2.8
CYTH3-208	ENST00000482460	ACE	P12821	1306 aa		32.52	■■■□□ 2.8
CYTH3-208	ENST00000482460	NBPF8	Q3BBV2	869 aa		32.52	■■■□□ 2.8
CYTH3-208	ENST00000482460	CABP2	Q9NPB3	220 aa		32.5	■■■□□ 2.79
CYTH3-208	ENST00000482460	FAM83G	A6ND36	823 aa		32.49	■■■□□ 2.79
CYTH3-208	ENST00000482460	NWD2	Q9ULI1	1742 aa		32.48	■■■□□ 2.79
CYTH3-208	ENST00000482460	PLCH1	Q4KWH8	1693 aa		32.47	■■■□□ 2.79
CYTH3-208	ENST00000482460	TONSL	Q96HA7	1378 aa		32.46	■■■□□ 2.79
CYTH3-208	ENST00000482460	PPIP5K1	Q6PFW1	1433 aa		32.45	■■■□□ 2.79
CYTH3-208	ENST00000482460	RALGAPB	Q86X10	1494 aa		32.44	■■■□□ 2.78
CYTH3-208	ENST00000482460	CRYBG1	Q9Y4K1	1723 aa		32.44	■■■□□ 2.78
CYTH3-208	ENST00000482460	VPS72	Q15906	364 aa		32.44	■■■□□ 2.78
CYTH3-208	ENST00000482460	EVC2	Q86UK5	1308 aa		32.44	■■■□□ 2.78
CYTH3-208	ENST00000482460	GLI3	P10071	1580 aa		32.42	■■■□□ 2.78
CYTH3-208	ENST00000482460	ATAD2	Q6PL18	1390 aa		32.4	■■■□□ 2.78
CYTH3-208	ENST00000482460	CABP1	Q9NZU7	370 aa		32.39	■■■□□ 2.78
CYTH3-208	ENST00000482460	COL14A1	Q05707	1796 aa	Known RBP	32.39	■■■□□ 2.78
CYTH3-208	ENST00000482460	BTG4	Q9NY30	223 aa		32.38	■■■□□ 2.77
CYTH3-208	ENST00000482460	NUTM2G	Q5VZR2	741 aa		32.37	■■■□□ 2.77
CYTH3-208	ENST00000482460	CARD11	Q9BXL7	1154 aa		32.37	■■■□□ 2.77
CYTH3-208	ENST00000482460	CCDC9	Q9Y3X0	531 aa	Known RBP	32.37	■■■□□ 2.77
CYTH3-208	ENST00000482460	ABTB2	Q8N961	1025 aa		32.36	■■■□□ 2.77
CYTH3-208	ENST00000482460	BRD4	O60885	1362 aa	Predicted RBP	32.35	■■■□□ 2.77
CYTH3-208	ENST00000482460	PRDM11	Q9NQV5	511 aa		32.34	■■■□□ 2.77
CYTH3-208	ENST00000482460	NRAP	Q86VF7	1730 aa		32.34	■■■□□ 2.77
CYTH3-208	ENST00000482460	PHRF1	Q9P1Y6	1649 aa	Known RBP	32.33	■■■□□ 2.77
CYTH3-208	ENST00000482460	ONECUT3	O60422	494 aa	Predicted RBP	32.32	■■■□□ 2.76
CYTH3-208	ENST00000482460	NLRP13	Q86W25	1043 aa		32.3	■■■□□ 2.76
CYTH3-208	ENST00000482460	KIAA0232	Q92628	1395 aa		32.3	■■■□□ 2.76
CYTH3-208	ENST00000482460	USP6	P35125	1406 aa		32.29	■■■□□ 2.76
CYTH3-208	ENST00000482460	ZC3H6	P61129	1189 aa	Known RBP	32.29	■■■□□ 2.76
CYTH3-208	ENST00000482460	SEPT12	Q8IYM1	358 aa		32.29	■■■□□ 2.76
CYTH3-208	ENST00000482460	SBNO2	Q9Y2G9	1366 aa		32.29	■■■□□ 2.76
CYTH3-208	ENST00000482460	USP19	O94966	1318 aa		32.26	■■■□□ 2.76
CYTH3-208	ENST00000482460	BRWD3	Q6RI45	1802 aa		32.26	■■■□□ 2.76
CYTH3-208	ENST00000482460	CHRNA2	Q15822	529 aa		32.25	■■■□□ 2.75
CYTH3-208	ENST00000482460	ZNF692	Q9BU19	519 aa	Predicted RBP	32.25	■■■□□ 2.75
CYTH3-208	ENST00000482460	EP400	Q96L91	3159 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	CCDC125	Q86Z20	511 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	SSH2	Q76I76	1423 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	NRK	Q7Z2Y5	1582 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	SPATA31A5	Q5VU36	1347 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	SPATA31A7	Q8IWB4	1347 aa		32.22	■■■□□ 2.75
CYTH3-208	ENST00000482460	GC	P02774	474 aa		32.21	■■■□□ 2.75
CYTH3-208	ENST00000482460	NLRP6	P59044	892 aa		32.2	■■■□□ 2.75
CYTH3-208	ENST00000482460	FAM98C	Q17RN3	349 aa	Known RBP	32.2	■■■□□ 2.75
CYTH3-208	ENST00000482460	CPD	O75976	1380 aa		32.19	■■■□□ 2.74
CYTH3-208	ENST00000482460	AKAP12	Q02952	1782 aa		32.18	■■■□□ 2.74
CYTH3-208	ENST00000482460	KRT27	Q7Z3Y8	459 aa		32.17	■■■□□ 2.74
CYTH3-208	ENST00000482460		A0A0G2JS52	829 aa		32.16	■■■□□ 2.74
CYTH3-208	ENST00000482460	MYT1	Q01538	1121 aa		32.16	■■■□□ 2.74
CYTH3-208	ENST00000482460	STRN4	Q9NRL3	753 aa		32.16	■■■□□ 2.74
CYTH3-208	ENST00000482460	CPSF1	Q10570	1443 aa	Known RBP	32.16	■■■□□ 2.74
CYTH3-208	ENST00000482460	TTC21B	Q7Z4L5	1316 aa		32.15	■■■□□ 2.74
CYTH3-208	ENST00000482460	EVA1C	P58658	441 aa		32.13	■■■□□ 2.73
CYTH3-208	ENST00000482460	SPATA31A1	Q5TZJ5	1347 aa		32.13	■■■□□ 2.73
CYTH3-208	ENST00000482460	PIK3C2A	O00443	1686 aa		32.12	■■■□□ 2.73
CYTH3-208	ENST00000482460	CAMTA1	Q9Y6Y1	1673 aa		32.12	■■■□□ 2.73
CYTH3-208	ENST00000482460	TTC21A	Q8NDW8	1320 aa		32.12	■■■□□ 2.73
CYTH3-208	ENST00000482460	SLIT3	O75094	1523 aa		32.11	■■■□□ 2.73
CYTH3-208	ENST00000482460	KTN1	Q86UP2	1357 aa	Known RBP	32.11	■■■□□ 2.73
CYTH3-208	ENST00000482460	LMO7	Q8WWI1	1683 aa		32.11	■■■□□ 2.73
CYTH3-208	ENST00000482460	PUS7	Q96PZ0	661 aa	Known RBP	32.1	■■■□□ 2.73
CYTH3-208	ENST00000482460	BLM	P54132	1417 aa	Predicted RBP	32.09	■■■□□ 2.73
CYTH3-208	ENST00000482460	ST20-MTHFS	A0A0A6YYL1	179 aa		32.08	■■■□□ 2.73
CYTH3-208	ENST00000482460	PCGF6	Q9BYE7	350 aa		32.08	■■■□□ 2.73
CYTH3-208	ENST00000482460	CLSPN	Q9HAW4	1339 aa		32.07	■■■□□ 2.72
CYTH3-208	ENST00000482460	TESK2	Q96S53	571 aa		32.07	■■■□□ 2.72
CYTH3-208	ENST00000482460	THSD7A	Q9UPZ6	1657 aa		32.06	■■■□□ 2.72
CYTH3-208	ENST00000482460	SLC24A1	O60721	1099 aa		32.06	■■■□□ 2.72
CYTH3-208	ENST00000482460	TMC1	Q8TDI8	760 aa		32.06	■■■□□ 2.72
CYTH3-208	ENST00000482460	TIMELESS	Q9UNS1	1208 aa		32.06	■■■□□ 2.72
CYTH3-208	ENST00000482460	MON2	Q7Z3U7	1717 aa		32.06	■■■□□ 2.72
CYTH3-208	ENST00000482460	LARP1	Q6PKG0	1096 aa	Known RBP	32.05	■■■□□ 2.72
CYTH3-208	ENST00000482460	KCNH5	Q8NCM2	988 aa		32.04	■■■□□ 2.72
CYTH3-208	ENST00000482460	SLC12A5	Q9H2X9	1139 aa		32.04	■■■□□ 2.72
CYTH3-208	ENST00000482460	AATK	Q6ZMQ8	1374 aa		32.04	■■■□□ 2.72
CYTH3-208	ENST00000482460	CD163L1	Q9NR16	1453 aa		32.03	■■■□□ 2.72
CYTH3-208	ENST00000482460	ZBTB7C	A1YPR0	619 aa		32.03	■■■□□ 2.72
CYTH3-208	ENST00000482460	USP35	Q9P2H5	1018 aa		32.03	■■■□□ 2.72
CYTH3-208	ENST00000482460	BARGIN	Q6ZT62	677 aa		32.02	■■■□□ 2.72
CYTH3-208	ENST00000482460	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.02	■■■□□ 2.72
CYTH3-208	ENST00000482460	SF3B2	Q13435	895 aa	Known RBP	32.01	■■■□□ 2.71
CYTH3-208	ENST00000482460	COL5A2	P05997	1499 aa	Predicted RBP	32.01	■■■□□ 2.71
CYTH3-208	ENST00000482460	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	31.99	■■■□□ 2.71
CYTH3-208	ENST00000482460	TCP11L2	Q8N4U5	519 aa		31.99	■■■□□ 2.71
CYTH3-208	ENST00000482460	TERF2IP	Q9NYB0	399 aa		31.99	■■■□□ 2.71
CYTH3-208	ENST00000482460	ARHGEF25	Q86VW2	580 aa		31.98	■■■□□ 2.71
CYTH3-208	ENST00000482460	COL18A1	P39060	1754 aa		31.97	■■■□□ 2.71
CYTH3-208	ENST00000482460	THRAP3	Q9Y2W1	955 aa	Known RBP	31.97	■■■□□ 2.71
CYTH3-208	ENST00000482460	USP31	Q70CQ4	1352 aa		31.95	■■■□□ 2.71
CYTH3-208	ENST00000482460	FAM182B	Q5T319	152 aa		31.95	■■■□□ 2.71
CYTH3-208	ENST00000482460	USP47	Q96K76	1375 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	EDC4	Q6P2E9	1401 aa	Known RBP	31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	SOX12	O15370	315 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	DEFB132	Q7Z7B7	95 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	ZRANB1	Q9UGI0	708 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	AXIN2	Q9Y2T1	843 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	NINL	Q9Y2I6	1382 aa		31.94	■■■□□ 2.7
CYTH3-208	ENST00000482460	CRB1	P82279	1406 aa		31.93	■■■□□ 2.7

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms