RNA–Protein interactions for RNA: ENST00000482395.1

TRA2A-206, Transcript of transformer 2 alpha homolog, humanhuman

TSL 2

Gene TRA2A, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-206ENST00000482395 NBPF8Q3BBV2 869 aa29.58■■■□□ 2.33
TRA2A-206ENST00000482395 RALGAPBQ86X10 1494 aa29.58■■■□□ 2.33
TRA2A-206ENST00000482395 PPIP5K1Q6PFW1 1433 aa29.57■■■□□ 2.32
TRA2A-206ENST00000482395 ACEP12821 1306 aa29.57■■■□□ 2.32
TRA2A-206ENST00000482395 UNC5CLQ8IV45 518 aa29.57■■■□□ 2.32
TRA2A-206ENST00000482395 EVC2Q86UK5 1308 aa29.56■■■□□ 2.32
TRA2A-206ENST00000482395 PAK3O75914 559 aaPredicted RBP29.56■■■□□ 2.32
TRA2A-206ENST00000482395 COL14A1Q05707 1796 aaKnown RBP29.54■■■□□ 2.32
TRA2A-206ENST00000482395 BRD4O60885 1362 aaPredicted RBP29.54■■■□□ 2.32
TRA2A-206ENST00000482395 PHRF1Q9P1Y6 1649 aaKnown RBP29.53■■■□□ 2.32
TRA2A-206ENST00000482395 CABP2Q9NPB3 220 aa29.53■■■□□ 2.32
TRA2A-206ENST00000482395 SBNO2Q9Y2G9 1366 aa29.52■■■□□ 2.32
TRA2A-206ENST00000482395 GJD4Q96KN9 370 aaPredicted RBP29.51■■■□□ 2.31
TRA2A-206ENST00000482395 CARD11Q9BXL7 1154 aa29.5■■■□□ 2.31
TRA2A-206ENST00000482395 NRAPQ86VF7 1730 aa29.5■■■□□ 2.31
TRA2A-206ENST00000482395 PLEKHG5O94827 1062 aa29.49■■■□□ 2.31
TRA2A-206ENST00000482395 GLI3P10071 1580 aa29.48■■■□□ 2.31
TRA2A-206ENST00000482395 UPF1Q92900 1129 aaKnown RBP eCLIP29.47■■■□□ 2.31
TRA2A-206ENST00000482395 VPS72Q15906 364 aa29.45■■■□□ 2.31
TRA2A-206ENST00000482395 AKAP12Q02952 1782 aa29.44■■■□□ 2.3
TRA2A-206ENST00000482395 ATAD2Q6PL18 1390 aa29.44■■■□□ 2.3
TRA2A-206ENST00000482395 FAM83GA6ND36 823 aa29.44■■■□□ 2.3
TRA2A-206ENST00000482395 CABP1Q9NZU7 370 aa29.43■■■□□ 2.3
TRA2A-206ENST00000482395 USP6P35125 1406 aa29.43■■■□□ 2.3
TRA2A-206ENST00000482395 CLSPNQ9HAW4 1339 aa29.42■■■□□ 2.3
TRA2A-206ENST00000482395 ABTB2Q8N961 1025 aa29.41■■■□□ 2.3
TRA2A-206ENST00000482395 NRKQ7Z2Y5 1582 aa29.4■■■□□ 2.3
TRA2A-206ENST00000482395 NLRP13Q86W25 1043 aa29.38■■■□□ 2.29
TRA2A-206ENST00000482395 PRDM11Q9NQV5 511 aa29.38■■■□□ 2.29
TRA2A-206ENST00000482395 BTG4Q9NY30 223 aa29.38■■■□□ 2.29
TRA2A-206ENST00000482395 USP19O94966 1318 aa29.38■■■□□ 2.29
TRA2A-206ENST00000482395 ZNF692Q9BU19 519 aaPredicted RBP29.37■■■□□ 2.29
TRA2A-206ENST00000482395 KIAA0232Q92628 1395 aa29.36■■■□□ 2.29
TRA2A-206ENST00000482395 BRWD3Q6RI45 1802 aa29.36■■■□□ 2.29
TRA2A-206ENST00000482395 CCDC9Q9Y3X0 531 aaKnown RBP29.35■■■□□ 2.29
TRA2A-206ENST00000482395 NUTM2GQ5VZR2 741 aa29.34■■■□□ 2.29
TRA2A-206ENST00000482395 TIMELESSQ9UNS1 1208 aa29.34■■■□□ 2.29
TRA2A-206ENST00000482395 SSH2Q76I76 1423 aa29.34■■■□□ 2.29
TRA2A-206ENST00000482395 MON2Q7Z3U7 1717 aa29.33■■■□□ 2.29
TRA2A-206ENST00000482395 PIK3C2AO00443 1686 aa29.32■■■□□ 2.28
TRA2A-206ENST00000482395 CPDO75976 1380 aa29.32■■■□□ 2.28
TRA2A-206ENST00000482395 SLC24A1O60721 1099 aa29.32■■■□□ 2.28
TRA2A-206ENST00000482395 CPSF1Q10570 1443 aaKnown RBP29.31■■■□□ 2.28
TRA2A-206ENST00000482395 ONECUT3O60422 494 aaPredicted RBP29.31■■■□□ 2.28
TRA2A-206ENST00000482395 SLIT3O75094 1523 aa29.3■■■□□ 2.28
TRA2A-206ENST00000482395 PUS7Q96PZ0 661 aaKnown RBP29.3■■■□□ 2.28
TRA2A-206ENST00000482395 ZC3H6P61129 1189 aaKnown RBP29.29■■■□□ 2.28
TRA2A-206ENST00000482395 LMO7Q8WWI1 1683 aa29.28■■■□□ 2.28
TRA2A-206ENST00000482395 TTC21AQ8NDW8 1320 aa29.28■■■□□ 2.28
TRA2A-206ENST00000482395 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
TRA2A-206ENST00000482395 GCP02774 474 aa29.26■■■□□ 2.27
TRA2A-206ENST00000482395 NLRP6P59044 892 aa29.26■■■□□ 2.27
TRA2A-206ENST00000482395 SEPT12Q8IYM1 358 aa29.26■■■□□ 2.27
TRA2A-206ENST00000482395 KTN1Q86UP2 1357 aaKnown RBP29.26■■■□□ 2.27
TRA2A-206ENST00000482395 SPATA31A5Q5VU36 1347 aa29.25■■■□□ 2.27
TRA2A-206ENST00000482395 SPATA31A7Q8IWB4 1347 aa29.25■■■□□ 2.27
TRA2A-206ENST00000482395 TTC21BQ7Z4L5 1316 aa29.24■■■□□ 2.27
TRA2A-206ENST00000482395 CHRNA2Q15822 529 aa29.24■■■□□ 2.27
TRA2A-206ENST00000482395 CCDC125Q86Z20 511 aa29.24■■■□□ 2.27
TRA2A-206ENST00000482395 USP54Q70EL1 1684 aa29.22■■■□□ 2.27
TRA2A-206ENST00000482395 THSD7AQ9UPZ6 1657 aa29.21■■■□□ 2.27
TRA2A-206ENST00000482395 ST20-MTHFSA0A0A6YYL1 179 aa29.21■■■□□ 2.27
TRA2A-206ENST00000482395 NINLQ9Y2I6 1382 aa29.21■■■□□ 2.27
TRA2A-206ENST00000482395 CAMTA1Q9Y6Y1 1673 aa29.21■■■□□ 2.27
TRA2A-206ENST00000482395 TESK2Q96S53 571 aa29.2■■■□□ 2.26
TRA2A-206ENST00000482395 EP400Q96L91 3159 aa29.2■■■□□ 2.26
TRA2A-206ENST00000482395 CD163L1Q9NR16 1453 aa29.19■■■□□ 2.26
TRA2A-206ENST00000482395 FAM98CQ17RN3 349 aaKnown RBP29.19■■■□□ 2.26
TRA2A-206ENST00000482395 A0A0G2JS52 829 aa29.18■■■□□ 2.26
TRA2A-206ENST00000482395 MYT1Q01538 1121 aa29.18■■■□□ 2.26
TRA2A-206ENST00000482395 KRT27Q7Z3Y8 459 aa29.18■■■□□ 2.26
TRA2A-206ENST00000482395 HDGFL2Q7Z4V5 671 aaPredicted RBP29.18■■■□□ 2.26
TRA2A-206ENST00000482395 KCNH5Q8NCM2 988 aa29.18■■■□□ 2.26
TRA2A-206ENST00000482395 SPATA31A1Q5TZJ5 1347 aa29.18■■■□□ 2.26
TRA2A-206ENST00000482395 USP47Q96K76 1375 aa29.17■■■□□ 2.26
TRA2A-206ENST00000482395 EVA1CP58658 441 aa29.17■■■□□ 2.26
TRA2A-206ENST00000482395 TMC1Q8TDI8 760 aa29.17■■■□□ 2.26
TRA2A-206ENST00000482395 STRN4Q9NRL3 753 aa29.17■■■□□ 2.26
TRA2A-206ENST00000482395 AATKQ6ZMQ8 1374 aa29.15■■■□□ 2.26
TRA2A-206ENST00000482395 BLMP54132 1417 aaPredicted RBP29.15■■■□□ 2.26
TRA2A-206ENST00000482395 TERF2IPQ9NYB0 399 aa29.15■■■□□ 2.26
TRA2A-206ENST00000482395 COL18A1P39060 1754 aa29.15■■■□□ 2.26
TRA2A-206ENST00000482395 COL5A2P05997 1499 aaPredicted RBP29.15■■■□□ 2.26
TRA2A-206ENST00000482395 EDC4Q6P2E9 1401 aaKnown RBP29.14■■■□□ 2.26
TRA2A-206ENST00000482395 USP31Q70CQ4 1352 aa29.13■■■□□ 2.25
TRA2A-206ENST00000482395 ABCC6O95255 1503 aa29.12■■■□□ 2.25
TRA2A-206ENST00000482395 SLC12A5Q9H2X9 1139 aa29.11■■■□□ 2.25
TRA2A-206ENST00000482395 A0A1W2PP64 1363 aa29.11■■■□□ 2.25
TRA2A-206ENST00000482395 NFAT5O94916 1531 aa29.1■■■□□ 2.25
TRA2A-206ENST00000482395 TMF1P82094 1093 aa29.1■■■□□ 2.25
TRA2A-206ENST00000482395 BARGINQ6ZT62 677 aa29.1■■■□□ 2.25
TRA2A-206ENST00000482395 THRAP3Q9Y2W1 955 aaKnown RBP29.09■■■□□ 2.25
TRA2A-206ENST00000482395 CRB1P82279 1406 aa29.08■■■□□ 2.25
TRA2A-206ENST00000482395 LARP1Q6PKG0 1096 aaKnown RBP29.07■■■□□ 2.24
TRA2A-206ENST00000482395 ARHGEF25Q86VW2 580 aa29.07■■■□□ 2.24
TRA2A-206ENST00000482395 CCER1Q8TC90 406 aaPredicted RBP29.07■■■□□ 2.24
TRA2A-206ENST00000482395 RGPD5Q99666 1765 aa29.06■■■□□ 2.24
TRA2A-206ENST00000482395 RGPD1P0DJD0 1748 aa29.06■■■□□ 2.24
TRA2A-206ENST00000482395 ZBTB7CA1YPR0 619 aa29.06■■■□□ 2.24
TRA2A-206ENST00000482395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms