RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 NWD2Q9ULI1 1742 aa13.98□□□□□ -0.17
TMEM39A-207ENST00000482162 ITSN1Q15811 1721 aa13.98□□□□□ -0.17
TMEM39A-207ENST00000482162 TOPAZ1Q8N9V7 1692 aa13.98□□□□□ -0.17
TMEM39A-207ENST00000482162 TRPM1Q7Z4N2 1603 aa13.97□□□□□ -0.17
TMEM39A-207ENST00000482162 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.17
TMEM39A-207ENST00000482162 CRYBG1Q9Y4K1 1723 aa13.96□□□□□ -0.17
TMEM39A-207ENST00000482162 PAK3O75914 559 aaPredicted RBP13.96□□□□□ -0.17
TMEM39A-207ENST00000482162 CCDC125Q86Z20 511 aa13.96□□□□□ -0.17
TMEM39A-207ENST00000482162 CABP2Q9NPB3 220 aa13.96□□□□□ -0.17
TMEM39A-207ENST00000482162 SRPK2P78362 688 aaKnown RBP13.95□□□□□ -0.18
TMEM39A-207ENST00000482162 TRIM26Q12899 539 aaPredicted RBP13.95□□□□□ -0.18
TMEM39A-207ENST00000482162 BTG4Q9NY30 223 aa13.95□□□□□ -0.18
TMEM39A-207ENST00000482162 USP19O94966 1318 aa13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 PPIP5K1Q6PFW1 1433 aa13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 SSH2Q76I76 1423 aa13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 PLCH1Q4KWH8 1693 aa13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 COL14A1Q05707 1796 aaKnown RBP13.94□□□□□ -0.18
TMEM39A-207ENST00000482162 PLEKHG5O94827 1062 aa13.93□□□□□ -0.18
TMEM39A-207ENST00000482162 CABP1Q9NZU7 370 aa13.93□□□□□ -0.18
TMEM39A-207ENST00000482162 SBNO2Q9Y2G9 1366 aa13.93□□□□□ -0.18
TMEM39A-207ENST00000482162 SPATA31A5Q5VU36 1347 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 EVC2Q86UK5 1308 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 SPATA31A7Q8IWB4 1347 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 ABTB2Q8N961 1025 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 PRDM11Q9NQV5 511 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 CPDO75976 1380 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 NRAPQ86VF7 1730 aa13.92□□□□□ -0.18
TMEM39A-207ENST00000482162 QRICH2Q9H0J4 1663 aa13.91□□□□□ -0.18
TMEM39A-207ENST00000482162 USP6P35125 1406 aa13.9□□□□□ -0.18
TMEM39A-207ENST00000482162 NLRP13Q86W25 1043 aa13.9□□□□□ -0.18
TMEM39A-207ENST00000482162 GCP02774 474 aa13.89□□□□□ -0.19
TMEM39A-207ENST00000482162 ZC3H6P61129 1189 aaKnown RBP13.89□□□□□ -0.19
TMEM39A-207ENST00000482162 NUTM2GQ5VZR2 741 aa13.89□□□□□ -0.19
TMEM39A-207ENST00000482162 ZNF692Q9BU19 519 aaPredicted RBP13.89□□□□□ -0.19
TMEM39A-207ENST00000482162 EP400Q96L91 3159 aa13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 CCDC9Q9Y3X0 531 aaKnown RBP13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 BLMP54132 1417 aaPredicted RBP13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 CPSF1Q10570 1443 aaKnown RBP13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 SPATA31A1Q5TZJ5 1347 aa13.88□□□□□ -0.19
TMEM39A-207ENST00000482162 BRWD3Q6RI45 1802 aa13.87□□□□□ -0.19
TMEM39A-207ENST00000482162 PHRF1Q9P1Y6 1649 aaKnown RBP13.87□□□□□ -0.19
TMEM39A-207ENST00000482162 FAM98CQ17RN3 349 aaKnown RBP13.87□□□□□ -0.19
TMEM39A-207ENST00000482162 PUS7Q96PZ0 661 aaKnown RBP13.87□□□□□ -0.19
TMEM39A-207ENST00000482162 CAMTA1Q9Y6Y1 1673 aa13.86□□□□□ -0.19
TMEM39A-207ENST00000482162 CARD11Q9BXL7 1154 aa13.86□□□□□ -0.19
TMEM39A-207ENST00000482162 TONSLQ96HA7 1378 aa13.85□□□□□ -0.19
TMEM39A-207ENST00000482162 NRKQ7Z2Y5 1582 aa13.85□□□□□ -0.19
TMEM39A-207ENST00000482162 BARGINQ6ZT62 677 aa13.85□□□□□ -0.19
TMEM39A-207ENST00000482162 NLRP6P59044 892 aa13.84□□□□□ -0.19
TMEM39A-207ENST00000482162 LMO7Q8WWI1 1683 aa13.84□□□□□ -0.19
TMEM39A-207ENST00000482162 TTC21BQ7Z4L5 1316 aa13.84□□□□□ -0.19
TMEM39A-207ENST00000482162 SLIT3O75094 1523 aa13.84□□□□□ -0.19
TMEM39A-207ENST00000482162 AATKQ6ZMQ8 1374 aa13.83□□□□□ -0.19
TMEM39A-207ENST00000482162 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
TMEM39A-207ENST00000482162 TESK2Q96S53 571 aa13.83□□□□□ -0.2
TMEM39A-207ENST00000482162 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.2
TMEM39A-207ENST00000482162 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
TMEM39A-207ENST00000482162 EVA1CP58658 441 aa13.81□□□□□ -0.2
TMEM39A-207ENST00000482162 ARHGEF25Q86VW2 580 aa13.81□□□□□ -0.2
TMEM39A-207ENST00000482162 STRN4Q9NRL3 753 aa13.81□□□□□ -0.2
TMEM39A-207ENST00000482162 CD163L1Q9NR16 1453 aa13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 PIK3C2AO00443 1686 aa13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 DEFB132Q7Z7B7 95 aa13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 THRAP3Q9Y2W1 955 aaKnown RBP13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 USP31Q70CQ4 1352 aa13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 COL5A2P05997 1499 aaPredicted RBP13.8□□□□□ -0.2
TMEM39A-207ENST00000482162 AKAP12Q02952 1782 aa13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 SLC24A1O60721 1099 aa13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 KCNH5Q8NCM2 988 aa13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 ZRANB1Q9UGI0 708 aa13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 KTN1Q86UP2 1357 aaKnown RBP13.79□□□□□ -0.2
TMEM39A-207ENST00000482162 COL18A1P39060 1754 aa13.78□□□□□ -0.2
TMEM39A-207ENST00000482162 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
TMEM39A-207ENST00000482162 TIMELESSQ9UNS1 1208 aa13.78□□□□□ -0.2
TMEM39A-207ENST00000482162 AXIN2Q9Y2T1 843 aa13.78□□□□□ -0.2
TMEM39A-207ENST00000482162 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
TMEM39A-207ENST00000482162 DISP2A7MBM2 1401 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 CRB1P82279 1406 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 CLSPNQ9HAW4 1339 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 A0A0G2JS52 829 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 MYT1Q01538 1121 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 SF3B2Q13435 895 aaKnown RBP13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 FAM182BQ5T319 152 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 FAM196AQ6ZSG2 479 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
TMEM39A-207ENST00000482162 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
TMEM39A-207ENST00000482162 NFAT5O94916 1531 aa13.74□□□□□ -0.21
TMEM39A-207ENST00000482162 MON2Q7Z3U7 1717 aa13.74□□□□□ -0.21
TMEM39A-207ENST00000482162 BAG6P46379 1132 aa13.74□□□□□ -0.21
TMEM39A-207ENST00000482162 TERF2IPQ9NYB0 399 aa13.74□□□□□ -0.21
TMEM39A-207ENST00000482162 EDC4Q6P2E9 1401 aaKnown RBP13.73□□□□□ -0.21
TMEM39A-207ENST00000482162 NINLQ9Y2I6 1382 aa13.73□□□□□ -0.21
TMEM39A-207ENST00000482162 WDR17Q8IZU2 1322 aa13.73□□□□□ -0.21
TMEM39A-207ENST00000482162 HDGFL2Q7Z4V5 671 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms