RNA–Protein interactions for RNA: ENST00000482096.1

UBE2F-222, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 4

Gene UBE2F, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-222	ENST00000482096	SPATA31E1	Q6ZUB1	1445 aa		12.84	□□□□□ -0.35
UBE2F-222	ENST00000482096	PXDN	Q92626	1479 aa		12.84	□□□□□ -0.35
UBE2F-222	ENST00000482096	COL22A1	Q8NFW1	1626 aa	Predicted RBP	12.84	□□□□□ -0.35
UBE2F-222	ENST00000482096	ATAD2	Q6PL18	1390 aa		12.83	□□□□□ -0.36
UBE2F-222	ENST00000482096	CHRM1	P11229	460 aa	Predicted RBP	12.83	□□□□□ -0.36
UBE2F-222	ENST00000482096	PHF12	Q96QT6	1004 aa		12.83	□□□□□ -0.36
UBE2F-222	ENST00000482096	MPHOSPH9	Q99550	1183 aa		12.83	□□□□□ -0.36
UBE2F-222	ENST00000482096	XPC	Q01831	940 aa	Predicted RBP	12.82	□□□□□ -0.36
UBE2F-222	ENST00000482096	TMEM132E	Q6IEE7	984 aa		12.82	□□□□□ -0.36
UBE2F-222	ENST00000482096	BCL9L	Q86UU0	1499 aa		12.82	□□□□□ -0.36
UBE2F-222	ENST00000482096	NUTM2F	A1L443	756 aa		12.81	□□□□□ -0.36
UBE2F-222	ENST00000482096	SIRT1	Q96EB6	747 aa		12.81	□□□□□ -0.36
UBE2F-222	ENST00000482096	PLEKHH1	Q9ULM0	1364 aa		12.81	□□□□□ -0.36
UBE2F-222	ENST00000482096	PIK3C2G	O75747	1445 aa		12.79	□□□□□ -0.36
UBE2F-222	ENST00000482096	EVX2	Q03828	476 aa		12.79	□□□□□ -0.36
UBE2F-222	ENST00000482096	GJD4	Q96KN9	370 aa	Predicted RBP	12.79	□□□□□ -0.36
UBE2F-222	ENST00000482096	SPATA31A3	Q5VYP0	1347 aa		12.79	□□□□□ -0.36
UBE2F-222	ENST00000482096	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.79	□□□□□ -0.36
UBE2F-222	ENST00000482096	CCDC125	Q86Z20	511 aa		12.78	□□□□□ -0.36
UBE2F-222	ENST00000482096	C14orf93	Q9H972	538 aa	Known RBP	12.78	□□□□□ -0.36
UBE2F-222	ENST00000482096	RIOK3	O14730	519 aa	Known RBP	12.77	□□□□□ -0.37
UBE2F-222	ENST00000482096	KRT28	Q7Z3Y7	464 aa		12.77	□□□□□ -0.37
UBE2F-222	ENST00000482096	UNC5CL	Q8IV45	518 aa		12.77	□□□□□ -0.37
UBE2F-222	ENST00000482096	ZNF579	Q8NAF0	562 aa	Known RBP	12.77	□□□□□ -0.37
UBE2F-222	ENST00000482096	ACIN1	Q9UKV3	1341 aa	Known RBP	12.77	□□□□□ -0.37
UBE2F-222	ENST00000482096	MAP3K13	O43283	966 aa		12.76	□□□□□ -0.37
UBE2F-222	ENST00000482096	KIF12	Q96FN5	646 aa		12.76	□□□□□ -0.37
UBE2F-222	ENST00000482096	KNDC1	Q76NI1	1749 aa		12.76	□□□□□ -0.37
UBE2F-222	ENST00000482096	IFT172	Q9UG01	1749 aa		12.76	□□□□□ -0.37
UBE2F-222	ENST00000482096	SLIT2	O94813	1529 aa		12.75	□□□□□ -0.37
UBE2F-222	ENST00000482096	PHF8	Q9UPP1	1060 aa		12.75	□□□□□ -0.37
UBE2F-222	ENST00000482096	DHX57	Q6P158	1386 aa	Known RBP	12.74	□□□□□ -0.37
UBE2F-222	ENST00000482096	PSME1	Q06323	249 aa		12.74	□□□□□ -0.37
UBE2F-222	ENST00000482096	CFAP70	Q5T0N1	1121 aa		12.74	□□□□□ -0.37
UBE2F-222	ENST00000482096	PCDHB13	Q9Y5F0	798 aa		12.74	□□□□□ -0.37
UBE2F-222	ENST00000482096	FMN2	Q9NZ56	1722 aa		12.74	□□□□□ -0.37
UBE2F-222	ENST00000482096	NRXN1	Q9ULB1	1477 aa		12.73	□□□□□ -0.37
UBE2F-222	ENST00000482096	PCDHB8	Q9UN66	801 aa		12.73	□□□□□ -0.37
UBE2F-222	ENST00000482096	MARF1	Q9Y4F3	1742 aa	Known RBP	12.73	□□□□□ -0.37
UBE2F-222	ENST00000482096	KIF1A	Q12756	1690 aa		12.73	□□□□□ -0.37
UBE2F-222	ENST00000482096	RALGAPB	Q86X10	1494 aa		12.72	□□□□□ -0.37
UBE2F-222	ENST00000482096	TNS3	Q68CZ2	1445 aa		12.72	□□□□□ -0.37
UBE2F-222	ENST00000482096	SBNO1	A3KN83	1393 aa		12.71	□□□□□ -0.37
UBE2F-222	ENST00000482096	HAP1	P54257	671 aa	Predicted RBP	12.71	□□□□□ -0.37
UBE2F-222	ENST00000482096	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.71	□□□□□ -0.37
UBE2F-222	ENST00000482096	CABLES1	Q8TDN4	633 aa		12.71	□□□□□ -0.37
UBE2F-222	ENST00000482096	PRAM1	Q96QH2	718 aa		12.71	□□□□□ -0.37
UBE2F-222	ENST00000482096	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	12.71	□□□□□ -0.38
UBE2F-222	ENST00000482096	GLI3	P10071	1580 aa		12.7	□□□□□ -0.38
UBE2F-222	ENST00000482096	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.7	□□□□□ -0.38
UBE2F-222	ENST00000482096	VPS72	Q15906	364 aa		12.7	□□□□□ -0.38
UBE2F-222	ENST00000482096	IFNL1	Q8IU54	200 aa		12.7	□□□□□ -0.38
UBE2F-222	ENST00000482096	USP32	Q8NFA0	1604 aa		12.7	□□□□□ -0.38
UBE2F-222	ENST00000482096	ONECUT3	O60422	494 aa	Predicted RBP	12.69	□□□□□ -0.38
UBE2F-222	ENST00000482096	POGK	Q9P215	609 aa		12.69	□□□□□ -0.38
UBE2F-222	ENST00000482096	BLM	P54132	1417 aa	Predicted RBP	12.69	□□□□□ -0.38
UBE2F-222	ENST00000482096	ARHGEF10	O15013	1369 aa		12.69	□□□□□ -0.38
UBE2F-222	ENST00000482096	LMOD2	Q6P5Q4	547 aa		12.68	□□□□□ -0.38
UBE2F-222	ENST00000482096	SEPT12	Q8IYM1	358 aa		12.68	□□□□□ -0.38
UBE2F-222	ENST00000482096	ANKAR	Q7Z5J8	1434 aa		12.68	□□□□□ -0.38
UBE2F-222	ENST00000482096	DLC1	Q96QB1	1528 aa		12.67	□□□□□ -0.38
UBE2F-222	ENST00000482096	PMFBP1	Q8TBY8	1022 aa		12.67	□□□□□ -0.38
UBE2F-222	ENST00000482096	MS4A3	Q96HJ5	214 aa		12.67	□□□□□ -0.38
UBE2F-222	ENST00000482096	EP400	Q96L91	3159 aa		12.67	□□□□□ -0.38
UBE2F-222	ENST00000482096	SRCAP	Q6ZRS2	3230 aa		12.66	□□□□□ -0.38
UBE2F-222	ENST00000482096	FAM83G	A6ND36	823 aa		12.66	□□□□□ -0.38
UBE2F-222	ENST00000482096	SGIP1	Q9BQI5	828 aa		12.66	□□□□□ -0.38
UBE2F-222	ENST00000482096	DEFB132	Q7Z7B7	95 aa		12.65	□□□□□ -0.38
UBE2F-222	ENST00000482096	TAOK2	Q9UL54	1235 aa		12.65	□□□□□ -0.38
UBE2F-222	ENST00000482096	TRAK1	Q9UPV9	953 aa		12.65	□□□□□ -0.38
UBE2F-222	ENST00000482096	CCDC9	Q9Y3X0	531 aa	Known RBP	12.65	□□□□□ -0.38
UBE2F-222	ENST00000482096	RGPD8	O14715	1765 aa	Predicted RBP	12.65	□□□□□ -0.38
UBE2F-222	ENST00000482096	ADGRB1	O14514	1584 aa		12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	SF3B2	Q13435	895 aa	Known RBP	12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	KRT27	Q7Z3Y8	459 aa		12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	ZFP91	Q96JP5	570 aa	Predicted RBP	12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	RAB3GAP2	Q9H2M9	1393 aa		12.64	□□□□□ -0.39
UBE2F-222	ENST00000482096	PRR36	Q9H6K5	1346 aa		12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	STAC3	Q96MF2	364 aa		12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	HIRIP3	Q9BW71	556 aa	Predicted RBP	12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	EIF3A	Q14152	1382 aa	Known RBP	12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	GPRASP1	Q5JY77	1395 aa		12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	ADGRB2	O60241	1585 aa		12.63	□□□□□ -0.39
UBE2F-222	ENST00000482096	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	NWD2	Q9ULI1	1742 aa		12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	WASL	O00401	505 aa	Predicted RBP	12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	STK25	O00506	426 aa		12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	PDAP1	Q13442	181 aa	Known RBP	12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	DCAF11	Q8TEB1	546 aa		12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	BTG4	Q9NY30	223 aa		12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	KDM2A	Q9Y2K7	1162 aa		12.62	□□□□□ -0.39
UBE2F-222	ENST00000482096	BRWD3	Q6RI45	1802 aa		12.61	□□□□□ -0.39
UBE2F-222	ENST00000482096	HS6ST3	Q8IZP7	471 aa		12.61	□□□□□ -0.39
UBE2F-222	ENST00000482096	PLCH1	Q4KWH8	1693 aa		12.61	□□□□□ -0.39
UBE2F-222	ENST00000482096	ABCA3	Q99758	1704 aa		12.6	□□□□□ -0.39
UBE2F-222	ENST00000482096	GALR2	O43603	387 aa	Predicted RBP	12.6	□□□□□ -0.39
UBE2F-222	ENST00000482096	FAM98C	Q17RN3	349 aa	Known RBP	12.6	□□□□□ -0.39
UBE2F-222	ENST00000482096	TULP4	Q9NRJ4	1543 aa		12.59	□□□□□ -0.39
UBE2F-222	ENST00000482096		A0A0G2JS52	829 aa		12.59	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms